RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 SLFN13Q68D06 897 aa19.47■□□□□ 0.71
PCDHB17P-201ENST00000539533 ADGRF4Q8IZF3 695 aa19.47■□□□□ 0.71
PCDHB17P-201ENST00000539533 FMR1NBQ8N0W7 255 aaPredicted RBP19.47■□□□□ 0.71
PCDHB17P-201ENST00000539533 JMJD4Q9H9V9 463 aa19.47■□□□□ 0.71
PCDHB17P-201ENST00000539533 CMA1P23946 247 aa19.47■□□□□ 0.71
PCDHB17P-201ENST00000539533 MMP14P50281 582 aa19.47■□□□□ 0.71
PCDHB17P-201ENST00000539533 NAPAP54920 295 aa19.47■□□□□ 0.71
PCDHB17P-201ENST00000539533 GPATCH4Q5T3I0 446 aaKnown RBP19.47■□□□□ 0.71
PCDHB17P-201ENST00000539533 SHC4Q6S5L8 630 aa19.47■□□□□ 0.71
PCDHB17P-201ENST00000539533 CCDC148Q8NFR7 591 aa19.47■□□□□ 0.71
PCDHB17P-201ENST00000539533 A0A1W2PRG0 241 aa19.46■□□□□ 0.71
PCDHB17P-201ENST00000539533 TRIM75PA6NK02 468 aa19.46■□□□□ 0.71
PCDHB17P-201ENST00000539533 F5H6K3 240 aa19.46■□□□□ 0.71
PCDHB17P-201ENST00000539533 M0R2N6 131 aa19.46■□□□□ 0.71
PCDHB17P-201ENST00000539533 KLRC3Q07444 240 aa19.46■□□□□ 0.71
PCDHB17P-201ENST00000539533 SLC1A4P43007 532 aa19.46■□□□□ 0.71
PCDHB17P-201ENST00000539533 GRIN1Q05586 938 aa19.46■□□□□ 0.71
PCDHB17P-201ENST00000539533 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.46■□□□□ 0.71
PCDHB17P-201ENST00000539533 TBC1D12O60347 775 aa19.45■□□□□ 0.7
PCDHB17P-201ENST00000539533 CAVIN2O95810 425 aa19.45■□□□□ 0.7
PCDHB17P-201ENST00000539533 LMNB1P20700 586 aa19.45■□□□□ 0.7
PCDHB17P-201ENST00000539533 TNNI2P48788 182 aa19.45■□□□□ 0.7
PCDHB17P-201ENST00000539533 ZNF174Q15697 407 aa19.45■□□□□ 0.7
PCDHB17P-201ENST00000539533 KRI1Q8N9T8 703 aaKnown RBP19.45■□□□□ 0.7
PCDHB17P-201ENST00000539533 C16orf45Q96MC5 204 aaPredicted RBP19.45■□□□□ 0.7
PCDHB17P-201ENST00000539533 ZMYND12Q9H0C1 365 aa19.45■□□□□ 0.7
PCDHB17P-201ENST00000539533 PCDHA6Q9UN73 950 aa19.45■□□□□ 0.7
PCDHB17P-201ENST00000539533 PCDHA8Q9Y5H6 950 aa19.45■□□□□ 0.7
PCDHB17P-201ENST00000539533 SMCO2A6NFE2 343 aa19.44■□□□□ 0.7
PCDHB17P-201ENST00000539533 USP17L10C9JJH3 530 aa19.44■□□□□ 0.7
PCDHB17P-201ENST00000539533 KINO60870 393 aaKnown RBP19.44■□□□□ 0.7
PCDHB17P-201ENST00000539533 PFKFB1P16118 471 aa19.44■□□□□ 0.7
PCDHB17P-201ENST00000539533 COA7Q96BR5 231 aa19.44■□□□□ 0.7
PCDHB17P-201ENST00000539533 TEPSINQ96N21 525 aa19.44■□□□□ 0.7
PCDHB17P-201ENST00000539533 NUP88Q99567 741 aaPredicted RBP19.44■□□□□ 0.7
PCDHB17P-201ENST00000539533 SYT17Q9BSW7 474 aa19.44■□□□□ 0.7
PCDHB17P-201ENST00000539533 HACL1Q9UJ83 578 aa19.44■□□□□ 0.7
PCDHB17P-201ENST00000539533 FBXO2Q9UK22 296 aaPredicted RBP19.44■□□□□ 0.7
PCDHB17P-201ENST00000539533 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.44■□□□□ 0.7
PCDHB17P-201ENST00000539533 CUTAO60888 179 aa19.44■□□□□ 0.7
PCDHB17P-201ENST00000539533 ECE1P42892 770 aa19.44■□□□□ 0.7
PCDHB17P-201ENST00000539533 SPECC1Q5M775 1068 aa19.44■□□□□ 0.7
PCDHB17P-201ENST00000539533 TTC38Q5R3I4 469 aa19.44■□□□□ 0.7
PCDHB17P-201ENST00000539533 DAGLBQ8NCG7 672 aa19.44■□□□□ 0.7
PCDHB17P-201ENST00000539533 DCAF4Q8WV16 495 aa19.44■□□□□ 0.7
PCDHB17P-201ENST00000539533 ZBTB21Q9ULJ3 1066 aa19.44■□□□□ 0.7
PCDHB17P-201ENST00000539533 CEP131Q9UPN4 1083 aa19.44■□□□□ 0.7
PCDHB17P-201ENST00000539533 SMTNL1A8MU46 457 aa19.43■□□□□ 0.7
PCDHB17P-201ENST00000539533 NDUFB10O96000 172 aa19.43■□□□□ 0.7
PCDHB17P-201ENST00000539533 PTPREP23469 700 aa19.43■□□□□ 0.7
PCDHB17P-201ENST00000539533 KIF4BQ2VIQ3 1234 aa19.43■□□□□ 0.7
PCDHB17P-201ENST00000539533 GALNT17Q6IS24 598 aa19.43■□□□□ 0.7
PCDHB17P-201ENST00000539533 GMCL1P1Q8NEA9 526 aa19.43■□□□□ 0.7
PCDHB17P-201ENST00000539533 ACER1Q8TDN7 264 aa19.43■□□□□ 0.7
PCDHB17P-201ENST00000539533 PPP1R11O60927 126 aaPredicted RBP19.43■□□□□ 0.7
PCDHB17P-201ENST00000539533 CDC25BP30305 580 aa19.43■□□□□ 0.7
PCDHB17P-201ENST00000539533 RESP18Q5W5W9 173 aa19.43■□□□□ 0.7
PCDHB17P-201ENST00000539533 CCDC12Q8WUD4 166 aaPredicted RBP19.43■□□□□ 0.7
PCDHB17P-201ENST00000539533 CACTINQ8WUQ7 758 aaKnown RBP19.43■□□□□ 0.7
PCDHB17P-201ENST00000539533 PNMA6FA0A0J9YX94 578 aa19.42■□□□□ 0.7
PCDHB17P-201ENST00000539533 ZNF202O95125 648 aa19.42■□□□□ 0.7
PCDHB17P-201ENST00000539533 MAP3K10Q02779 954 aa19.42■□□□□ 0.7
PCDHB17P-201ENST00000539533 TNFAIP1Q13829 316 aa19.42■□□□□ 0.7
PCDHB17P-201ENST00000539533 C6orf50Q9HD87 102 aa19.42■□□□□ 0.7
PCDHB17P-201ENST00000539533 CCDC194A0A1B0GVG4 234 aa19.42■□□□□ 0.7
PCDHB17P-201ENST00000539533 TNNT1P13805 278 aa19.42■□□□□ 0.7
PCDHB17P-201ENST00000539533 CAP2P40123 477 aa19.42■□□□□ 0.7
PCDHB17P-201ENST00000539533 NCBP1Q09161 790 aaKnown RBP19.42■□□□□ 0.7
PCDHB17P-201ENST00000539533 CCDC144BQ3MJ40 725 aa19.42■□□□□ 0.7
PCDHB17P-201ENST00000539533 SPICE1Q8N0Z3 855 aa19.42■□□□□ 0.7
PCDHB17P-201ENST00000539533 FAM177A1Q8N128 213 aaPredicted RBP19.42■□□□□ 0.7
PCDHB17P-201ENST00000539533 HPSEQ9Y251 543 aa19.42■□□□□ 0.7
PCDHB17P-201ENST00000539533 SRPRBQ9Y5M8 271 aaKnown RBP19.42■□□□□ 0.7
PCDHB17P-201ENST00000539533 H7C1D1 291 aa19.41■□□□□ 0.7
PCDHB17P-201ENST00000539533 TRAPPC10P48553 1259 aa19.41■□□□□ 0.7
PCDHB17P-201ENST00000539533 ERCC4Q92889 916 aaPredicted RBP19.41■□□□□ 0.7
PCDHB17P-201ENST00000539533 MTMR8Q96EF0 704 aa19.41■□□□□ 0.7
PCDHB17P-201ENST00000539533 DEFB129Q9H1M3 183 aa19.41■□□□□ 0.7
PCDHB17P-201ENST00000539533 GNA11P29992 359 aa19.41■□□□□ 0.7
PCDHB17P-201ENST00000539533 MCM7P33993 719 aa19.41■□□□□ 0.7
PCDHB17P-201ENST00000539533 IQCB1Q15051 598 aa19.41■□□□□ 0.7
PCDHB17P-201ENST00000539533 KIAA1755Q5JYT7 1200 aa19.41■□□□□ 0.7
PCDHB17P-201ENST00000539533 SDF4Q9BRK5 362 aa19.41■□□□□ 0.7
PCDHB17P-201ENST00000539533 GOLGA6L19H0YKK7 550 aa19.4■□□□□ 0.7
PCDHB17P-201ENST00000539533 ZBTB5O15062 677 aa19.4■□□□□ 0.7
PCDHB17P-201ENST00000539533 SYKP43405 635 aa19.4■□□□□ 0.7
PCDHB17P-201ENST00000539533 PTGDRQ13258 359 aa19.4■□□□□ 0.7
PCDHB17P-201ENST00000539533 SYCP1Q15431 976 aa19.4■□□□□ 0.7
PCDHB17P-201ENST00000539533 INF2Q27J81 1249 aa19.4■□□□□ 0.7
PCDHB17P-201ENST00000539533 SARM1Q6SZW1 724 aa19.4■□□□□ 0.7
PCDHB17P-201ENST00000539533 CCDC84Q86UT8 332 aaPredicted RBP19.4■□□□□ 0.7
PCDHB17P-201ENST00000539533 TRPM4Q8TD43 1214 aa19.4■□□□□ 0.7
PCDHB17P-201ENST00000539533 GMCL1Q96IK5 515 aa19.4■□□□□ 0.7
PCDHB17P-201ENST00000539533 ARHGEF10LQ9HCE6 1279 aa19.4■□□□□ 0.7
PCDHB17P-201ENST00000539533 GPRC5DQ9NZD1 345 aa19.4■□□□□ 0.7
PCDHB17P-201ENST00000539533 PHF20L1A8MW92 1017 aa19.4■□□□□ 0.7
PCDHB17P-201ENST00000539533 hCG_1984214I3L0E3 225 aa19.4■□□□□ 0.7
PCDHB17P-201ENST00000539533 YBX3P16989 372 aaKnown RBP eCLIP19.4■□□□□ 0.7
PCDHB17P-201ENST00000539533 GPC2Q8N158 579 aa19.4■□□□□ 0.7
PCDHB17P-201ENST00000539533 ZNF713Q8N859 430 aaPredicted RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms