RNA–Protein interactions for RNA: ENST00000539429.1

GTF2H3-207, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 2

Gene GTF2H3, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-207ENST00000539429 DNAJC18Q9H819 358 aa11.29□□□□□ -0.6
GTF2H3-207ENST00000539429 MKNK2Q9HBH9 465 aa11.29□□□□□ -0.6
GTF2H3-207ENST00000539429 ZCCHC17Q9NP64 241 aaKnown RBP11.29□□□□□ -0.6
GTF2H3-207ENST00000539429 DIAPH3Q9NSV4 1193 aa11.29□□□□□ -0.6
GTF2H3-207ENST00000539429 CYP2D7A0A087X1C5 515 aa11.28□□□□□ -0.6
GTF2H3-207ENST00000539429 USP17L10C9JJH3 530 aa11.28□□□□□ -0.6
GTF2H3-207ENST00000539429 SLC3A2P08195 630 aaKnown RBP11.28□□□□□ -0.6
GTF2H3-207ENST00000539429 SHMT1P34896 483 aa11.28□□□□□ -0.6
GTF2H3-207ENST00000539429 GRM5P41594 1212 aa11.28□□□□□ -0.6
GTF2H3-207ENST00000539429 HMGCS2P54868 508 aa11.28□□□□□ -0.6
GTF2H3-207ENST00000539429 SP3Q02447 781 aa11.28□□□□□ -0.6
GTF2H3-207ENST00000539429 ZYXQ15942 572 aaKnown RBP11.28□□□□□ -0.6
GTF2H3-207ENST00000539429 ZMYM1Q5SVZ6 1142 aa11.28□□□□□ -0.6
GTF2H3-207ENST00000539429 C12orf60Q5U649 245 aa11.28□□□□□ -0.6
GTF2H3-207ENST00000539429 TATDN1Q6P1N9 297 aa11.28□□□□□ -0.6
GTF2H3-207ENST00000539429 CTR9Q6PD62 1173 aa11.28□□□□□ -0.6
GTF2H3-207ENST00000539429 CTU1Q7Z7A3 348 aaKnown RBP11.28□□□□□ -0.6
GTF2H3-207ENST00000539429 PLPP7Q8NBV4 271 aa11.28□□□□□ -0.6
GTF2H3-207ENST00000539429 ERO1AQ96HE7 468 aa11.28□□□□□ -0.6
GTF2H3-207ENST00000539429 CFHR5Q9BXR6 569 aa11.28□□□□□ -0.6
GTF2H3-207ENST00000539429 LOC285556D6RIA3 1793 aa11.27□□□□□ -0.61
GTF2H3-207ENST00000539429 GSG1L2A8MUP6 293 aa11.27□□□□□ -0.61
GTF2H3-207ENST00000539429 C19orf81C9J6K1 198 aa11.27□□□□□ -0.61
GTF2H3-207ENST00000539429 HIP1O00291 1037 aa11.27□□□□□ -0.61
GTF2H3-207ENST00000539429 GDF9O60383 454 aa11.27□□□□□ -0.61
GTF2H3-207ENST00000539429 ADH1CP00326 375 aa11.27□□□□□ -0.61
GTF2H3-207ENST00000539429 RFX1P22670 979 aa11.27□□□□□ -0.61
GTF2H3-207ENST00000539429 MFAP1P55081 439 aaKnown RBP11.27□□□□□ -0.61
GTF2H3-207ENST00000539429 ATP2B2Q01814 1243 aa11.27□□□□□ -0.61
GTF2H3-207ENST00000539429 SHROOM1Q2M3G4 852 aaPredicted RBP11.27□□□□□ -0.61
GTF2H3-207ENST00000539429 MAP7D1Q3KQU3 841 aa11.27□□□□□ -0.61
GTF2H3-207ENST00000539429 INTS6LQ5JSJ4 861 aaKnown RBP11.27□□□□□ -0.61
GTF2H3-207ENST00000539429 GIMAP6Q6P9H5 292 aa11.27□□□□□ -0.61
GTF2H3-207ENST00000539429 CCDC129Q6ZRS4 1044 aa11.27□□□□□ -0.61
GTF2H3-207ENST00000539429 IFNL3Q8IZI9 196 aa11.27□□□□□ -0.61
GTF2H3-207ENST00000539429 SLC44A5Q8NCS7 719 aa11.27□□□□□ -0.61
GTF2H3-207ENST00000539429 CD99L2Q8TCZ2 262 aa11.27□□□□□ -0.61
GTF2H3-207ENST00000539429 CCDC136Q96JN2 1154 aa11.27□□□□□ -0.61
GTF2H3-207ENST00000539429 WDR18Q9BV38 432 aa11.27□□□□□ -0.61
GTF2H3-207ENST00000539429 MCOLN1Q9GZU1 580 aa11.27□□□□□ -0.61
GTF2H3-207ENST00000539429 OSBPL3Q9H4L5 887 aa11.27□□□□□ -0.61
GTF2H3-207ENST00000539429 ZNF287Q9HBT7 754 aa11.27□□□□□ -0.61
GTF2H3-207ENST00000539429 HELLSQ9NRZ9 838 aa11.27□□□□□ -0.61
GTF2H3-207ENST00000539429 MGAMO43451 1857 aa11.27□□□□□ -0.61
GTF2H3-207ENST00000539429 MYH4Q9Y623 1939 aa11.27□□□□□ -0.61
GTF2H3-207ENST00000539429 TLR2O60603 784 aa11.26□□□□□ -0.61
GTF2H3-207ENST00000539429 CYP2C8P10632 490 aa11.26□□□□□ -0.61
GTF2H3-207ENST00000539429 CDK8P49336 464 aa11.26□□□□□ -0.61
GTF2H3-207ENST00000539429 BACE1P56817 501 aa11.26□□□□□ -0.61
GTF2H3-207ENST00000539429 IRX3P78415 501 aaPredicted RBP11.26□□□□□ -0.61
GTF2H3-207ENST00000539429 NMIQ13287 307 aaPredicted RBP11.26□□□□□ -0.61
GTF2H3-207ENST00000539429 SEPT2Q15019 361 aa11.26□□□□□ -0.61
GTF2H3-207ENST00000539429 MCMDC2Q4G0Z9 681 aa11.26□□□□□ -0.61
GTF2H3-207ENST00000539429 NOM1Q5C9Z4 860 aaKnown RBP11.26□□□□□ -0.61
GTF2H3-207ENST00000539429 USP17L2Q6R6M4 530 aa11.26□□□□□ -0.61
GTF2H3-207ENST00000539429 ZNF444Q8N0Y2 327 aaPredicted RBP11.26□□□□□ -0.61
GTF2H3-207ENST00000539429 SNIP1Q8TAD8 396 aaKnown RBP11.26□□□□□ -0.61
GTF2H3-207ENST00000539429 CCDC17Q96LX7 622 aa11.26□□□□□ -0.61
GTF2H3-207ENST00000539429 ARHGEF10LQ9HCE6 1279 aa11.26□□□□□ -0.61
GTF2H3-207ENST00000539429 CPA4Q9UI42 421 aa11.26□□□□□ -0.61
GTF2H3-207ENST00000539429 AGTPBP1Q9UPW5 1226 aa11.26□□□□□ -0.61
GTF2H3-207ENST00000539429 TRIM17Q9Y577 477 aa11.26□□□□□ -0.61
GTF2H3-207ENST00000539429 LZTS3O60299 673 aaPredicted RBP11.25□□□□□ -0.61
GTF2H3-207ENST00000539429 SDSP20132 328 aa11.25□□□□□ -0.61
GTF2H3-207ENST00000539429 FSHRP23945 695 aa11.25□□□□□ -0.61
GTF2H3-207ENST00000539429 USP14P54578 494 aa11.25□□□□□ -0.61
GTF2H3-207ENST00000539429 RAB15P59190 212 aa11.25□□□□□ -0.61
GTF2H3-207ENST00000539429 JAG1P78504 1218 aa11.25□□□□□ -0.61
GTF2H3-207ENST00000539429 GABPAQ06546 454 aa11.25□□□□□ -0.61
GTF2H3-207ENST00000539429 PDE4BQ07343 736 aa11.25□□□□□ -0.61
GTF2H3-207ENST00000539429 NR5A1Q13285 461 aa11.25□□□□□ -0.61
GTF2H3-207ENST00000539429 TSGA10IPQ3SY00 556 aa11.25□□□□□ -0.61
GTF2H3-207ENST00000539429 SBK1Q52WX2 424 aa11.25□□□□□ -0.61
GTF2H3-207ENST00000539429 GPAT2Q6NUI2 795 aa11.25□□□□□ -0.61
GTF2H3-207ENST00000539429 TRAF7Q6Q0C0 670 aa11.25□□□□□ -0.61
GTF2H3-207ENST00000539429 CWC27Q6UX04 472 aaKnown RBP11.25□□□□□ -0.61
GTF2H3-207ENST00000539429 TMEM179Q6ZVK1 233 aa11.25□□□□□ -0.61
GTF2H3-207ENST00000539429 C16orf86Q6ZW13 317 aa11.25□□□□□ -0.61
GTF2H3-207ENST00000539429 CENPQQ7L2Z9 268 aaPredicted RBP11.25□□□□□ -0.61
GTF2H3-207ENST00000539429 TICAM2Q86XR7 235 aa11.25□□□□□ -0.61
GTF2H3-207ENST00000539429 FAM227BQ96M60 508 aa11.25□□□□□ -0.61
GTF2H3-207ENST00000539429 SH2D4AQ9H788 454 aa11.25□□□□□ -0.61
GTF2H3-207ENST00000539429 EFCC1Q9HA90 598 aa11.25□□□□□ -0.61
GTF2H3-207ENST00000539429 TOMM22Q9NS69 142 aa11.25□□□□□ -0.61
GTF2H3-207ENST00000539429 DOLKQ9UPQ8 538 aa11.25□□□□□ -0.61
GTF2H3-207ENST00000539429 A0A0D9SFI3 127 aa11.24□□□□□ -0.61
GTF2H3-207ENST00000539429 CCDC85CA6NKD9 419 aa11.24□□□□□ -0.61
GTF2H3-207ENST00000539429 AKR1B1P15121 316 aa11.24□□□□□ -0.61
GTF2H3-207ENST00000539429 ICA1Q05084 483 aa11.24□□□□□ -0.61
GTF2H3-207ENST00000539429 MOGSQ13724 837 aa11.24□□□□□ -0.61
GTF2H3-207ENST00000539429 PKN2Q16513 984 aaKnown RBP11.24□□□□□ -0.61
GTF2H3-207ENST00000539429 TREML2Q5T2D2 321 aa11.24□□□□□ -0.61
GTF2H3-207ENST00000539429 TTC22Q5TAA0 569 aa11.24□□□□□ -0.61
GTF2H3-207ENST00000539429 CCAR1Q8IX12 1150 aaKnown RBP11.24□□□□□ -0.61
GTF2H3-207ENST00000539429 EPB41L4AQ9HCS5 686 aaPredicted RBP11.24□□□□□ -0.61
GTF2H3-207ENST00000539429 SLC45A1Q9Y2W3 748 aa11.24□□□□□ -0.61
GTF2H3-207ENST00000539429 ZSWIM8A7E2V4 1837 aa11.23□□□□□ -0.61
GTF2H3-207ENST00000539429 TNFRSF10AO00220 468 aa11.23□□□□□ -0.61
GTF2H3-207ENST00000539429 PRDM1O75626 825 aa11.23□□□□□ -0.61
GTF2H3-207ENST00000539429 DEPDC4Q8N2C3 294 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms