RNA–Protein interactions for RNA: ENST00000539271.5

LRTOMT-216, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 4 BASIC

Gene LRTOMT, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-216ENST00000539271 PAK6Q9NQU5 681 aaPredicted RBP10.53□□□□□ -0.72
LRTOMT-216ENST00000539271 FLRT1Q9NZU1 646 aa10.53□□□□□ -0.72
LRTOMT-216ENST00000539271 CEP290O15078 2479 aa10.53□□□□□ -0.72
LRTOMT-216ENST00000539271 ZNF536O15090 1300 aa10.53□□□□□ -0.72
LRTOMT-216ENST00000539271 MYH6P13533 1939 aa10.52□□□□□ -0.72
LRTOMT-216ENST00000539271 PRKAR2AP13861 404 aaKnown RBP10.52□□□□□ -0.73
LRTOMT-216ENST00000539271 SLC16A2P36021 539 aa10.52□□□□□ -0.73
LRTOMT-216ENST00000539271 ANTXR2P58335 489 aa10.52□□□□□ -0.73
LRTOMT-216ENST00000539271 KCTD2Q14681 263 aa10.52□□□□□ -0.73
LRTOMT-216ENST00000539271 GPATCH4Q5T3I0 446 aaKnown RBP10.52□□□□□ -0.73
LRTOMT-216ENST00000539271 OLFML2BQ68BL8 750 aa10.52□□□□□ -0.73
LRTOMT-216ENST00000539271 CHST13Q8NET6 341 aa10.52□□□□□ -0.73
LRTOMT-216ENST00000539271 RANBP17Q9H2T7 1088 aaKnown RBP10.52□□□□□ -0.73
LRTOMT-216ENST00000539271 SLC5A4Q9NY91 659 aa10.52□□□□□ -0.73
LRTOMT-216ENST00000539271 RPTORQ8N122 1335 aa10.52□□□□□ -0.73
LRTOMT-216ENST00000539271 MCM3APO60318 1980 aa10.52□□□□□ -0.73
LRTOMT-216ENST00000539271 MKI67P46013 3256 aaKnown RBP10.51□□□□□ -0.73
LRTOMT-216ENST00000539271 IFIT3O14879 490 aaKnown RBP10.51□□□□□ -0.73
LRTOMT-216ENST00000539271 PGK2P07205 417 aa10.51□□□□□ -0.73
LRTOMT-216ENST00000539271 GJA8P48165 433 aa10.51□□□□□ -0.73
LRTOMT-216ENST00000539271 SNAP25P60880 206 aa10.51□□□□□ -0.73
LRTOMT-216ENST00000539271 CACNB2Q08289 660 aaPredicted RBP10.51□□□□□ -0.73
LRTOMT-216ENST00000539271 SART3Q15020 963 aaKnown RBP10.51□□□□□ -0.73
LRTOMT-216ENST00000539271 TKFCQ3LXA3 575 aa10.51□□□□□ -0.73
LRTOMT-216ENST00000539271 ASPRV1Q53RT3 343 aa10.51□□□□□ -0.73
LRTOMT-216ENST00000539271 RNF20Q5VTR2 975 aa10.51□□□□□ -0.73
LRTOMT-216ENST00000539271 MFSD14CQ5VZR4 134 aa10.51□□□□□ -0.73
LRTOMT-216ENST00000539271 CCDC174Q6PII3 467 aa10.51□□□□□ -0.73
LRTOMT-216ENST00000539271 CHST3Q7LGC8 479 aa10.51□□□□□ -0.73
LRTOMT-216ENST00000539271 IGDCC4Q8TDY8 1250 aa10.51□□□□□ -0.73
LRTOMT-216ENST00000539271 U2AF1L4Q8WU68 220 aaKnown RBP10.51□□□□□ -0.73
LRTOMT-216ENST00000539271 SHISA4Q96DD7 197 aa10.51□□□□□ -0.73
LRTOMT-216ENST00000539271 AGBL1Q96MI9 1066 aa10.51□□□□□ -0.73
LRTOMT-216ENST00000539271 MTA3Q9BTC8 594 aa10.51□□□□□ -0.73
LRTOMT-216ENST00000539271 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.51□□□□□ -0.73
LRTOMT-216ENST00000539271 HMX1Q9NP08 348 aaPredicted RBP10.51□□□□□ -0.73
LRTOMT-216ENST00000539271 FBXO40Q9UH90 709 aa10.51□□□□□ -0.73
LRTOMT-216ENST00000539271 DNAJC25-GNG10A0A024R161 153 aa10.5□□□□□ -0.73
LRTOMT-216ENST00000539271 ERICH2A1L162 156 aa10.5□□□□□ -0.73
LRTOMT-216ENST00000539271 SGPL1O95470 568 aa10.5□□□□□ -0.73
LRTOMT-216ENST00000539271 ICAM1P05362 532 aa10.5□□□□□ -0.73
LRTOMT-216ENST00000539271 PARP1P09874 1014 aaKnown RBP10.5□□□□□ -0.73
LRTOMT-216ENST00000539271 GOLGA8HP0CJ92 632 aa10.5□□□□□ -0.73
LRTOMT-216ENST00000539271 MCM5P33992 734 aa10.5□□□□□ -0.73
LRTOMT-216ENST00000539271 SLC4A3P48751 1232 aa10.5□□□□□ -0.73
LRTOMT-216ENST00000539271 COL9A3Q14050 684 aaPredicted RBP10.5□□□□□ -0.73
LRTOMT-216ENST00000539271 WTAPQ15007 396 aa10.5□□□□□ -0.73
LRTOMT-216ENST00000539271 ZNF792Q3KQV3 632 aa10.5□□□□□ -0.73
LRTOMT-216ENST00000539271 TSGA10IPQ3SY00 556 aa10.5□□□□□ -0.73
LRTOMT-216ENST00000539271 TMEM67Q5HYA8 995 aa10.5□□□□□ -0.73
LRTOMT-216ENST00000539271 MAML3Q96JK9 1138 aa10.5□□□□□ -0.73
LRTOMT-216ENST00000539271 DEFB118Q96PH6 123 aa10.5□□□□□ -0.73
LRTOMT-216ENST00000539271 CRISPLD2Q9H0B8 497 aa10.5□□□□□ -0.73
LRTOMT-216ENST00000539271 ACAD9Q9H845 621 aa10.5□□□□□ -0.73
LRTOMT-216ENST00000539271 SENP2Q9HC62 589 aa10.5□□□□□ -0.73
LRTOMT-216ENST00000539271 HOMER2Q9NSB8 354 aa10.5□□□□□ -0.73
LRTOMT-216ENST00000539271 RNF146Q9NTX7 359 aa10.5□□□□□ -0.73
LRTOMT-216ENST00000539271 CCPG1Q9ULG6 757 aa10.5□□□□□ -0.73
LRTOMT-216ENST00000539271 DIS3Q9Y2L1 958 aaKnown RBP10.5□□□□□ -0.73
LRTOMT-216ENST00000539271 PRC1O43663 620 aa10.49□□□□□ -0.73
LRTOMT-216ENST00000539271 REC8O95072 547 aa10.49□□□□□ -0.73
LRTOMT-216ENST00000539271 ALAS1P13196 640 aa10.49□□□□□ -0.73
LRTOMT-216ENST00000539271 TAL1P17542 331 aaPredicted RBP10.49□□□□□ -0.73
LRTOMT-216ENST00000539271 CAPN2P17655 700 aa10.49□□□□□ -0.73
LRTOMT-216ENST00000539271 CCND3P30281 292 aaPredicted RBP10.49□□□□□ -0.73
LRTOMT-216ENST00000539271 CYP2C19P33261 490 aa10.49□□□□□ -0.73
LRTOMT-216ENST00000539271 GRM4Q14833 912 aa10.49□□□□□ -0.73
LRTOMT-216ENST00000539271 PRPF38BQ5VTL8 546 aaKnown RBP10.49□□□□□ -0.73
LRTOMT-216ENST00000539271 RASEFQ8IZ41 740 aa10.49□□□□□ -0.73
LRTOMT-216ENST00000539271 ANKRD35Q8N283 1001 aa10.49□□□□□ -0.73
LRTOMT-216ENST00000539271 TRPV1Q8NER1 839 aa10.49□□□□□ -0.73
LRTOMT-216ENST00000539271 KCNB2Q92953 911 aa10.49□□□□□ -0.73
LRTOMT-216ENST00000539271 DDX11Q96FC9 970 aa10.49□□□□□ -0.73
LRTOMT-216ENST00000539271 TMEM87BQ96K49 555 aa10.49□□□□□ -0.73
LRTOMT-216ENST00000539271 TRERF1Q96PN7 1200 aa10.49□□□□□ -0.73
LRTOMT-216ENST00000539271 UBA5Q9GZZ9 404 aa10.49□□□□□ -0.73
LRTOMT-216ENST00000539271 CPVLQ9H3G5 476 aa10.49□□□□□ -0.73
LRTOMT-216ENST00000539271 LY9Q9HBG7 655 aa10.49□□□□□ -0.73
LRTOMT-216ENST00000539271 PNMA2Q9UL42 364 aa10.49□□□□□ -0.73
LRTOMT-216ENST00000539271 WDR19Q8NEZ3 1342 aa10.49□□□□□ -0.73
LRTOMT-216ENST00000539271 FRMPD3Q5JV73 1810 aa10.49□□□□□ -0.73
LRTOMT-216ENST00000539271 LCTP09848 1927 aa10.48□□□□□ -0.73
LRTOMT-216ENST00000539271 PALM3A6NDB9 673 aaPredicted RBP10.48□□□□□ -0.73
LRTOMT-216ENST00000539271 SH2B2O14492 632 aaPredicted RBP10.48□□□□□ -0.73
LRTOMT-216ENST00000539271 CYBAP13498 195 aa10.48□□□□□ -0.73
LRTOMT-216ENST00000539271 TROAPQ12815 778 aa10.48□□□□□ -0.73
LRTOMT-216ENST00000539271 MUM1L1Q5H9M0 696 aa10.48□□□□□ -0.73
LRTOMT-216ENST00000539271 UBE2Q1Q7Z7E8 422 aa10.48□□□□□ -0.73
LRTOMT-216ENST00000539271 CATIPQ7Z7H3 387 aa10.48□□□□□ -0.73
LRTOMT-216ENST00000539271 ADGRF4Q8IZF3 695 aa10.48□□□□□ -0.73
LRTOMT-216ENST00000539271 STAG2Q8N3U4 1231 aa10.48□□□□□ -0.73
LRTOMT-216ENST00000539271 MSL3Q8N5Y2 521 aaKnown RBP10.48□□□□□ -0.73
LRTOMT-216ENST00000539271 FGD4Q96M96 766 aa10.48□□□□□ -0.73
LRTOMT-216ENST00000539271 TINF2Q9BSI4 451 aa10.48□□□□□ -0.73
LRTOMT-216ENST00000539271 A1CFQ9NQ94 594 aaKnown RBP10.48□□□□□ -0.73
LRTOMT-216ENST00000539271 GPHNQ9NQX3 736 aaPredicted RBP10.48□□□□□ -0.73
LRTOMT-216ENST00000539271 MAD2L2Q9UI95 211 aa10.48□□□□□ -0.73
LRTOMT-216ENST00000539271 KLRF2D3W0D1 207 aa10.47□□□□□ -0.73
LRTOMT-216ENST00000539271 EPB41L2O43491 1005 aaKnown RBP10.47□□□□□ -0.73
LRTOMT-216ENST00000539271 TFRCP02786 760 aaKnown RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms