RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 TNFAIP2Q03169 654 aa14.55□□□□□ -0.08
YBX3-207ENST00000539204 TAP1Q03518 808 aa14.55□□□□□ -0.08
YBX3-207ENST00000539204 GRB10Q13322 594 aa14.55□□□□□ -0.08
YBX3-207ENST00000539204 ANKRD35Q8N283 1001 aa14.55□□□□□ -0.08
YBX3-207ENST00000539204 DYNLL2Q96FJ2 89 aa14.55□□□□□ -0.08
YBX3-207ENST00000539204 AGBL1Q96MI9 1066 aa14.55□□□□□ -0.08
YBX3-207ENST00000539204 CCDC8Q9H0W5 538 aaPredicted RBP14.55□□□□□ -0.08
YBX3-207ENST00000539204 KCNH6Q9H252 994 aa14.55□□□□□ -0.08
YBX3-207ENST00000539204 ANTXR1Q9H6X2 564 aa14.55□□□□□ -0.08
YBX3-207ENST00000539204 KANSL2Q9H9L4 492 aa14.55□□□□□ -0.08
YBX3-207ENST00000539204 RIPK3Q9Y572 518 aa14.55□□□□□ -0.08
YBX3-207ENST00000539204 MYO5AQ9Y4I1 1855 aaKnown RBP14.55□□□□□ -0.08
YBX3-207ENST00000539204 ANP32CO43423 234 aa14.54□□□□□ -0.08
YBX3-207ENST00000539204 SURF6O75683 361 aaKnown RBP14.54□□□□□ -0.08
YBX3-207ENST00000539204 CT47B1P0C2W7 299 aaPredicted RBP14.54□□□□□ -0.08
YBX3-207ENST00000539204 SSTR3P32745 418 aaPredicted RBP14.54□□□□□ -0.08
YBX3-207ENST00000539204 FAM83BQ5T0W9 1011 aa14.54□□□□□ -0.08
YBX3-207ENST00000539204 ARMCX2Q7L311 632 aa14.54□□□□□ -0.08
YBX3-207ENST00000539204 DEFB128Q7Z7B8 93 aa14.54□□□□□ -0.08
YBX3-207ENST00000539204 FAM178BQ8IXR5 827 aa14.54□□□□□ -0.08
YBX3-207ENST00000539204 CCDC144CPQ8IYA2 1237 aa14.54□□□□□ -0.08
YBX3-207ENST00000539204 ARHGAP45Q92619 1136 aa14.54□□□□□ -0.08
YBX3-207ENST00000539204 VWCEQ96DN2 955 aa14.54□□□□□ -0.08
YBX3-207ENST00000539204 SLC9A7Q96T83 725 aa14.54□□□□□ -0.08
YBX3-207ENST00000539204 AP5M1Q9H0R1 490 aa14.54□□□□□ -0.08
YBX3-207ENST00000539204 DCP1AQ9NPI6 582 aaPredicted RBP14.54□□□□□ -0.08
YBX3-207ENST00000539204 LMCD1Q9NZU5 365 aa14.54□□□□□ -0.08
YBX3-207ENST00000539204 DBNLQ9UJU6 430 aaKnown RBP14.54□□□□□ -0.08
YBX3-207ENST00000539204 CTDP1Q9Y5B0 961 aaPredicted RBP14.54□□□□□ -0.08
YBX3-207ENST00000539204 GRIN2DO15399 1336 aa14.54□□□□□ -0.08
YBX3-207ENST00000539204 LRRC37A2A6NM11 1700 aa14.54□□□□□ -0.08
YBX3-207ENST00000539204 SUPT20HL2P0C7V6 817 aa14.53□□□□□ -0.08
YBX3-207ENST00000539204 CYP2D6P10635 497 aa14.53□□□□□ -0.08
YBX3-207ENST00000539204 FSCN1Q16658 493 aaKnown RBP14.53□□□□□ -0.08
YBX3-207ENST00000539204 CPXCR1Q8N123 301 aa14.53□□□□□ -0.08
YBX3-207ENST00000539204 SDR42E1Q8WUS8 393 aa14.53□□□□□ -0.08
YBX3-207ENST00000539204 FBXL18Q96ME1 805 aa14.53□□□□□ -0.08
YBX3-207ENST00000539204 SLF1Q9BQI6 1058 aa14.53□□□□□ -0.08
YBX3-207ENST00000539204 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.52□□□□□ -0.09
YBX3-207ENST00000539204 DYNC1LI2O43237 492 aaPredicted RBP14.52□□□□□ -0.09
YBX3-207ENST00000539204 LPXNO60711 386 aa14.52□□□□□ -0.09
YBX3-207ENST00000539204 ZBED4O75132 1171 aa14.52□□□□□ -0.09
YBX3-207ENST00000539204 CDK8P49336 464 aa14.52□□□□□ -0.09
YBX3-207ENST00000539204 SLC9C2Q5TAH2 1124 aa14.52□□□□□ -0.09
YBX3-207ENST00000539204 HERC6Q8IVU3 1022 aa14.52□□□□□ -0.09
YBX3-207ENST00000539204 PRPF38AQ8NAV1 312 aaKnown RBP14.52□□□□□ -0.09
YBX3-207ENST00000539204 TLR7Q9NYK1 1049 aaKnown RBP14.52□□□□□ -0.09
YBX3-207ENST00000539204 FBXO40Q9UH90 709 aa14.52□□□□□ -0.09
YBX3-207ENST00000539204 ASTN1O14525 1302 aa14.51□□□□□ -0.09
YBX3-207ENST00000539204 COL11A1P12107 1806 aaPredicted RBP14.51□□□□□ -0.09
YBX3-207ENST00000539204 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.51□□□□□ -0.09
YBX3-207ENST00000539204 ATP2A1O14983 1001 aa14.51□□□□□ -0.09
YBX3-207ENST00000539204 PSMC6P62333 389 aa14.51□□□□□ -0.09
YBX3-207ENST00000539204 POLA2Q14181 598 aa14.51□□□□□ -0.09
YBX3-207ENST00000539204 TLK2Q86UE8 772 aa14.51□□□□□ -0.09
YBX3-207ENST00000539204 EAF2Q96CJ1 260 aaPredicted RBP14.51□□□□□ -0.09
YBX3-207ENST00000539204 FGD4Q96M96 766 aa14.51□□□□□ -0.09
YBX3-207ENST00000539204 KATNBL1Q9H079 304 aa14.51□□□□□ -0.09
YBX3-207ENST00000539204 ALDH8A1Q9H2A2 487 aaPredicted RBP14.51□□□□□ -0.09
YBX3-207ENST00000539204 GNEQ9Y223 722 aaKnown RBP14.51□□□□□ -0.09
YBX3-207ENST00000539204 WDFY4Q6ZS81 3184 aa14.51□□□□□ -0.09
YBX3-207ENST00000539204 ARHGEF15O94989 841 aa14.5□□□□□ -0.09
YBX3-207ENST00000539204 CYP2C9P11712 490 aa14.5□□□□□ -0.09
YBX3-207ENST00000539204 RFC2P35250 354 aa14.5□□□□□ -0.09
YBX3-207ENST00000539204 ATP8B2P98198 1209 aa14.5□□□□□ -0.09
YBX3-207ENST00000539204 TTF1Q15361 905 aaPredicted RBP14.5□□□□□ -0.09
YBX3-207ENST00000539204 AMOTL1Q8IY63 956 aa14.5□□□□□ -0.09
YBX3-207ENST00000539204 CHST13Q8NET6 341 aa14.5□□□□□ -0.09
YBX3-207ENST00000539204 FTOQ9C0B1 505 aaKnown RBP eCLIP14.5□□□□□ -0.09
YBX3-207ENST00000539204 UBE2ZQ9H832 354 aaPredicted RBP14.5□□□□□ -0.09
YBX3-207ENST00000539204 BCAR3O75815 825 aa14.49□□□□□ -0.09
YBX3-207ENST00000539204 PDE6AP16499 860 aa14.49□□□□□ -0.09
YBX3-207ENST00000539204 SMPD1P17405 629 aa14.49□□□□□ -0.09
YBX3-207ENST00000539204 LEXMQ3ZCV2 418 aa14.49□□□□□ -0.09
YBX3-207ENST00000539204 IQSEC1Q6DN90 963 aa14.49□□□□□ -0.09
YBX3-207ENST00000539204 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.49□□□□□ -0.09
YBX3-207ENST00000539204 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.49□□□□□ -0.09
YBX3-207ENST00000539204 SSH3Q8TE77 659 aa14.49□□□□□ -0.09
YBX3-207ENST00000539204 NUP88Q99567 741 aaPredicted RBP14.49□□□□□ -0.09
YBX3-207ENST00000539204 RAVER2Q9HCJ3 691 aaKnown RBP14.49□□□□□ -0.09
YBX3-207ENST00000539204 ATP8A2Q9NTI2 1148 aa14.49□□□□□ -0.09
YBX3-207ENST00000539204 TRMT13Q9NUP7 481 aaKnown RBP14.49□□□□□ -0.09
YBX3-207ENST00000539204 Q9Y3F1 56 aa14.49□□□□□ -0.09
YBX3-207ENST00000539204 PARP14Q460N5 1801 aa14.48□□□□□ -0.09
YBX3-207ENST00000539204 ZNF532Q9HCE3 1301 aa14.48□□□□□ -0.09
YBX3-207ENST00000539204 ASB14A6NK59 587 aa14.48□□□□□ -0.09
YBX3-207ENST00000539204 F5H6K3 240 aa14.48□□□□□ -0.09
YBX3-207ENST00000539204 IPO8O15397 1037 aaKnown RBP14.48□□□□□ -0.09
YBX3-207ENST00000539204 KCNA5P22460 613 aa14.48□□□□□ -0.09
YBX3-207ENST00000539204 CNTN2Q02246 1040 aa14.48□□□□□ -0.09
YBX3-207ENST00000539204 KLRC3Q07444 240 aa14.48□□□□□ -0.09
YBX3-207ENST00000539204 C12orf60Q5U649 245 aa14.48□□□□□ -0.09
YBX3-207ENST00000539204 LCORLQ8N3X6 602 aa14.48□□□□□ -0.09
YBX3-207ENST00000539204 RETREG2Q8NC44 543 aa14.48□□□□□ -0.09
YBX3-207ENST00000539204 NOP58Q9Y2X3 529 aaKnown RBP14.48□□□□□ -0.09
YBX3-207ENST00000539204 ZNF536O15090 1300 aa14.47□□□□□ -0.09
YBX3-207ENST00000539204 TNKSO95271 1327 aa14.47□□□□□ -0.09
YBX3-207ENST00000539204 BRWD1Q9NSI6 2320 aa14.47□□□□□ -0.09
YBX3-207ENST00000539204 POTEB3A0JP26 581 aa14.47□□□□□ -0.09
YBX3-207ENST00000539204 DCXO43602 365 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms