RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 NOL7Q9UMY1 257 aaKnown RBP17.71■□□□□ 0.43
VAMP1-207ENST00000539047 PCNTO95613 3336 aa17.7■□□□□ 0.42
VAMP1-207ENST00000539047 ESYT2A0FGR8 921 aa17.7■□□□□ 0.42
VAMP1-207ENST00000539047 ADCY7P51828 1080 aa17.7■□□□□ 0.42
VAMP1-207ENST00000539047 SLC35G1Q2M3R5 365 aa17.7■□□□□ 0.42
VAMP1-207ENST00000539047 FOXD4L6Q3SYB3 417 aaPredicted RBP17.7■□□□□ 0.42
VAMP1-207ENST00000539047 SH3D19Q5HYK7 790 aa17.7■□□□□ 0.42
VAMP1-207ENST00000539047 KIAA1755Q5JYT7 1200 aa17.7■□□□□ 0.42
VAMP1-207ENST00000539047 LDLRAD1Q5T700 205 aa17.7■□□□□ 0.42
VAMP1-207ENST00000539047 FOXD4L3Q6VB84 417 aaPredicted RBP17.7■□□□□ 0.42
VAMP1-207ENST00000539047 MOB2Q70IA6 237 aa17.7■□□□□ 0.42
VAMP1-207ENST00000539047 NOSTRINQ8IVI9 506 aa17.7■□□□□ 0.42
VAMP1-207ENST00000539047 PROCA1Q8NCQ7 364 aaPredicted RBP17.7■□□□□ 0.42
VAMP1-207ENST00000539047 OPTNQ96CV9 577 aa17.7■□□□□ 0.42
VAMP1-207ENST00000539047 CLMNQ96JQ2 1002 aa17.7■□□□□ 0.42
VAMP1-207ENST00000539047 EMILIN3Q9NT22 766 aa17.7■□□□□ 0.42
VAMP1-207ENST00000539047 GJB4Q9NTQ9 266 aa17.7■□□□□ 0.42
VAMP1-207ENST00000539047 PABPC4Q13310 644 aaKnown RBP eCLIP17.69■□□□□ 0.42
VAMP1-207ENST00000539047 GADL1Q6ZQY3 521 aa17.69■□□□□ 0.42
VAMP1-207ENST00000539047 BLIDQ8IZY5 108 aa17.69■□□□□ 0.42
VAMP1-207ENST00000539047 DAGLBQ8NCG7 672 aa17.69■□□□□ 0.42
VAMP1-207ENST00000539047 PCDHA4Q9UN74 947 aa17.69■□□□□ 0.42
VAMP1-207ENST00000539047 COL11A1P12107 1806 aaPredicted RBP17.68■□□□□ 0.42
VAMP1-207ENST00000539047 SMCO2A6NFE2 343 aa17.68■□□□□ 0.42
VAMP1-207ENST00000539047 USP17L15C9J2P7 530 aa17.68■□□□□ 0.42
VAMP1-207ENST00000539047 USP17L13C9JLJ4 530 aa17.68■□□□□ 0.42
VAMP1-207ENST00000539047 USP17L11C9JVI0 530 aa17.68■□□□□ 0.42
VAMP1-207ENST00000539047 USP17L18D6R9N7 530 aa17.68■□□□□ 0.42
VAMP1-207ENST00000539047 USP17L22D6RA61 530 aa17.68■□□□□ 0.42
VAMP1-207ENST00000539047 USP17L17D6RBQ6 530 aa17.68■□□□□ 0.42
VAMP1-207ENST00000539047 USP17L19D6RCP7 530 aa17.68■□□□□ 0.42
VAMP1-207ENST00000539047 USP17L20D6RJB6 530 aa17.68■□□□□ 0.42
VAMP1-207ENST00000539047 ZBED4O75132 1171 aa17.68■□□□□ 0.42
VAMP1-207ENST00000539047 U2AF2P26368 475 aaKnown RBP eCLIP17.68■□□□□ 0.42
VAMP1-207ENST00000539047 USP17L24Q0WX57 530 aa17.68■□□□□ 0.42
VAMP1-207ENST00000539047 SNAPC2Q13487 334 aa17.68■□□□□ 0.42
VAMP1-207ENST00000539047 FASTKD5Q7L8L6 764 aaKnown RBP17.68■□□□□ 0.42
VAMP1-207ENST00000539047 CUL5Q93034 780 aa17.68■□□□□ 0.42
VAMP1-207ENST00000539047 SCAND2PQ9GZW5 306 aaPredicted RBP17.68■□□□□ 0.42
VAMP1-207ENST00000539047 RANBP17Q9H2T7 1088 aaKnown RBP17.68■□□□□ 0.42
VAMP1-207ENST00000539047 PPP1R9AQ9ULJ8 1098 aa17.68■□□□□ 0.42
VAMP1-207ENST00000539047 PCDHA1Q9Y5I3 950 aa17.68■□□□□ 0.42
VAMP1-207ENST00000539047 MYPNQ86TC9 1320 aa17.68■□□□□ 0.42
VAMP1-207ENST00000539047 A0A0G2JLL6 359 aaPredicted RBP17.67■□□□□ 0.42
VAMP1-207ENST00000539047 CCDC194A0A1B0GVG4 234 aa17.67■□□□□ 0.42
VAMP1-207ENST00000539047 BTBD18B2RXH4 712 aa17.67■□□□□ 0.42
VAMP1-207ENST00000539047 MCM4P33991 863 aa17.67■□□□□ 0.42
VAMP1-207ENST00000539047 MRPL12P52815 198 aaKnown RBP17.67■□□□□ 0.42
VAMP1-207ENST00000539047 DNM1Q05193 864 aaKnown RBP17.67■□□□□ 0.42
VAMP1-207ENST00000539047 MCTP2Q6DN12 878 aa17.67■□□□□ 0.42
VAMP1-207ENST00000539047 PRRT2Q7Z6L0 340 aaPredicted RBP17.67■□□□□ 0.42
VAMP1-207ENST00000539047 TEX2Q8IWB9 1127 aa17.67■□□□□ 0.42
VAMP1-207ENST00000539047 REXO1Q8N1G1 1221 aaKnown RBP17.67■□□□□ 0.42
VAMP1-207ENST00000539047 ZMYND12Q9H0C1 365 aa17.67■□□□□ 0.42
VAMP1-207ENST00000539047 KCNH4Q9UQ05 1017 aa17.67■□□□□ 0.42
VAMP1-207ENST00000539047 ABCB11O95342 1321 aa17.67■□□□□ 0.42
VAMP1-207ENST00000539047 IRF6O14896 467 aa17.66■□□□□ 0.42
VAMP1-207ENST00000539047 FIBPO43427 364 aa17.66■□□□□ 0.42
VAMP1-207ENST00000539047 IRX3P78415 501 aaPredicted RBP17.66■□□□□ 0.42
VAMP1-207ENST00000539047 NFKBIBQ15653 356 aa17.66■□□□□ 0.42
VAMP1-207ENST00000539047 USH1GQ495M9 461 aa17.66■□□□□ 0.42
VAMP1-207ENST00000539047 RILPL1Q5EBL4 403 aa17.66■□□□□ 0.42
VAMP1-207ENST00000539047 MYSM1Q5VVJ2 828 aa17.66■□□□□ 0.42
VAMP1-207ENST00000539047 CCDC174Q6PII3 467 aa17.66■□□□□ 0.42
VAMP1-207ENST00000539047 KRT25Q7Z3Z0 450 aa17.66■□□□□ 0.42
VAMP1-207ENST00000539047 COA7Q96BR5 231 aa17.66■□□□□ 0.42
VAMP1-207ENST00000539047 FBXO28Q9NVF7 368 aa17.66■□□□□ 0.42
VAMP1-207ENST00000539047 A0A0G2JMZ2 1700 aa17.65■□□□□ 0.42
VAMP1-207ENST00000539047 KIF28PB7ZC32 967 aa17.65■□□□□ 0.42
VAMP1-207ENST00000539047 ITGBL1O95965 494 aaPredicted RBP17.65■□□□□ 0.42
VAMP1-207ENST00000539047 COG2Q14746 738 aa17.65■□□□□ 0.42
VAMP1-207ENST00000539047 CNKSR2Q8WXI2 1034 aa17.65■□□□□ 0.42
VAMP1-207ENST00000539047 WNK4Q96J92 1243 aa17.65■□□□□ 0.42
VAMP1-207ENST00000539047 SPATA32Q96LK8 384 aa17.65■□□□□ 0.42
VAMP1-207ENST00000539047 RIC8AQ9NPQ8 531 aa17.65■□□□□ 0.42
VAMP1-207ENST00000539047 HOXC10Q9NYD6 342 aa17.65■□□□□ 0.42
VAMP1-207ENST00000539047 CCPG1Q9ULG6 757 aa17.65■□□□□ 0.42
VAMP1-207ENST00000539047 CEP131Q9UPN4 1083 aa17.65■□□□□ 0.42
VAMP1-207ENST00000539047 CNPY2Q9Y2B0 182 aa17.65■□□□□ 0.42
VAMP1-207ENST00000539047 MRPL11Q9Y3B7 192 aaKnown RBP17.65■□□□□ 0.42
VAMP1-207ENST00000539047 ICAM1P05362 532 aa17.64■□□□□ 0.41
VAMP1-207ENST00000539047 ZBTB48P10074 688 aaPredicted RBP17.64■□□□□ 0.41
VAMP1-207ENST00000539047 CETPP11597 493 aa17.64■□□□□ 0.41
VAMP1-207ENST00000539047 OSBPP22059 807 aa17.64■□□□□ 0.41
VAMP1-207ENST00000539047 GTF2A2P52657 109 aa17.64■□□□□ 0.41
VAMP1-207ENST00000539047 HUNKP57058 714 aa17.64■□□□□ 0.41
VAMP1-207ENST00000539047 SNAP25P60880 206 aa17.64■□□□□ 0.41
VAMP1-207ENST00000539047 FMR1Q06787 632 aaKnown RBP eCLIP17.64■□□□□ 0.41
VAMP1-207ENST00000539047 NR5A1Q13285 461 aa17.64■□□□□ 0.41
VAMP1-207ENST00000539047 DGKZQ13574 1117 aa17.64■□□□□ 0.41
VAMP1-207ENST00000539047 CATSPERGQ6ZRH7 1159 aa17.64■□□□□ 0.41
VAMP1-207ENST00000539047 PSTPIP2Q9H939 334 aa17.64■□□□□ 0.41
VAMP1-207ENST00000539047 PNMA3Q9UL41 463 aa17.64■□□□□ 0.41
VAMP1-207ENST00000539047 AGTPBP1Q9UPW5 1226 aa17.64■□□□□ 0.41
VAMP1-207ENST00000539047 RLFQ13129 1914 aa17.64■□□□□ 0.41
VAMP1-207ENST00000539047 GOLGA6L4A6NEF3 574 aa17.63■□□□□ 0.41
VAMP1-207ENST00000539047 PPP1R11O60927 126 aaPredicted RBP17.63■□□□□ 0.41
VAMP1-207ENST00000539047 BMP15O95972 392 aa17.63■□□□□ 0.41
VAMP1-207ENST00000539047 TRAPPC10P48553 1259 aa17.63■□□□□ 0.41
VAMP1-207ENST00000539047 OAZ1P54368 228 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms