RNA–Protein interactions for RNA: ENST00000538974.5

RAPGEF4-214, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 2 BASIC

Gene RAPGEF4, Length 3,920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-214ENST00000538974 TOB1P50616 345 aaPredicted RBP7.84□□□□□ -1.15
RAPGEF4-214ENST00000538974 MRPL12P52815 198 aaKnown RBP7.84□□□□□ -1.15
RAPGEF4-214ENST00000538974 WDR78Q5VTH9 848 aa7.84□□□□□ -1.15
RAPGEF4-214ENST00000538974 OR8K1Q8NGG5 319 aa7.84□□□□□ -1.15
RAPGEF4-214ENST00000538974 CNOT6LQ96LI5 555 aaKnown RBP7.84□□□□□ -1.15
RAPGEF4-214ENST00000538974 GSDMAQ96QA5 445 aa7.84□□□□□ -1.15
RAPGEF4-214ENST00000538974 TUBGCP2Q9BSJ2 902 aa7.84□□□□□ -1.15
RAPGEF4-214ENST00000538974 GOLGA6L10A6NI86 522 aa7.84□□□□□ -1.16
RAPGEF4-214ENST00000538974 USP17L5A8MUK1 530 aa7.84□□□□□ -1.16
RAPGEF4-214ENST00000538974 PPP1R12BO60237 982 aaPredicted RBP7.84□□□□□ -1.16
RAPGEF4-214ENST00000538974 SRGAP2O75044 1071 aa7.84□□□□□ -1.16
RAPGEF4-214ENST00000538974 PRCPP42785 496 aa7.84□□□□□ -1.16
RAPGEF4-214ENST00000538974 CDK8P49336 464 aa7.84□□□□□ -1.16
RAPGEF4-214ENST00000538974 FOXP4Q8IVH2 680 aaPredicted RBP7.84□□□□□ -1.16
RAPGEF4-214ENST00000538974 CLRN2A0PK11 232 aa7.83□□□□□ -1.16
RAPGEF4-214ENST00000538974 MAP9Q49MG5 647 aa7.83□□□□□ -1.16
RAPGEF4-214ENST00000538974 CNNM4Q6P4Q7 775 aa7.83□□□□□ -1.16
RAPGEF4-214ENST00000538974 LRRN4CLQ8ND94 238 aa7.83□□□□□ -1.16
RAPGEF4-214ENST00000538974 PCDHB13Q9Y5F0 798 aa7.83□□□□□ -1.16
RAPGEF4-214ENST00000538974 EPN1Q9Y6I3 576 aaPredicted RBP7.83□□□□□ -1.16
RAPGEF4-214ENST00000538974 XDHP47989 1333 aa7.83□□□□□ -1.16
RAPGEF4-214ENST00000538974 SMIM23A6NLE4 172 aa7.83□□□□□ -1.16
RAPGEF4-214ENST00000538974 SMC1AQ14683 1233 aaKnown RBP7.83□□□□□ -1.16
RAPGEF4-214ENST00000538974 PTPAQ15257 358 aa7.83□□□□□ -1.16
RAPGEF4-214ENST00000538974 NKX1-1Q15270 411 aaPredicted RBP7.83□□□□□ -1.16
RAPGEF4-214ENST00000538974 LLGL1Q15334 1064 aa7.83□□□□□ -1.16
RAPGEF4-214ENST00000538974 UTP14CQ5TAP6 766 aaKnown RBP7.83□□□□□ -1.16
RAPGEF4-214ENST00000538974 NBPF11Q86T75 865 aa7.83□□□□□ -1.16
RAPGEF4-214ENST00000538974 TRIML1Q8N9V2 468 aa7.83□□□□□ -1.16
RAPGEF4-214ENST00000538974 CEP95Q96GE4 821 aa7.83□□□□□ -1.16
RAPGEF4-214ENST00000538974 TRIM31Q9BZY9 425 aa7.83□□□□□ -1.16
RAPGEF4-214ENST00000538974 PCDHA12Q9UN75 941 aa7.83□□□□□ -1.16
RAPGEF4-214ENST00000538974 PARP3Q9Y6F1 533 aa7.83□□□□□ -1.16
RAPGEF4-214ENST00000538974 TCP10L2B9ZVM9 353 aa7.83□□□□□ -1.16
RAPGEF4-214ENST00000538974 ATP2C2O75185 946 aa7.83□□□□□ -1.16
RAPGEF4-214ENST00000538974 MAGEA1P43355 309 aa7.83□□□□□ -1.16
RAPGEF4-214ENST00000538974 NTRK3Q16288 839 aa7.83□□□□□ -1.16
RAPGEF4-214ENST00000538974 IFIH1Q9BYX4 1025 aaKnown RBP7.83□□□□□ -1.16
RAPGEF4-214ENST00000538974 PSTPIP2Q9H939 334 aa7.83□□□□□ -1.16
RAPGEF4-214ENST00000538974 SCAF8Q9UPN6 1271 aaKnown RBP7.83□□□□□ -1.16
RAPGEF4-214ENST00000538974 KIAA1024Q9UPX6 916 aa7.83□□□□□ -1.16
RAPGEF4-214ENST00000538974 ZEB2O60315 1214 aa7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 TFRCP02786 760 aaKnown RBP7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 ERCC5P28715 1186 aaPredicted RBP7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 PABPC4Q13310 644 aaKnown RBP eCLIP7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 ALX1Q15699 326 aa7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 TXNRD1Q16881 649 aa7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 GPBP1Q86WP2 473 aa7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 KIFC2Q96AC6 838 aa7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 BRIP1Q9BX63 1249 aa7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 OSBPL5Q9H0X9 879 aaPredicted RBP7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 TRIM10Q9UDY6 481 aa7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 USP17L15C9J2P7 530 aa7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 USP17L13C9JLJ4 530 aa7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 USP17L11C9JVI0 530 aa7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 USP17L18D6R9N7 530 aa7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 USP17L22D6RA61 530 aa7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 USP17L17D6RBQ6 530 aa7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 USP17L19D6RCP7 530 aa7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 USP17L20D6RJB6 530 aa7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 FCER1AP12319 257 aa7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 USP17L24Q0WX57 530 aa7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 PRKG1Q13976 671 aa7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 USP17L6PQ6QN14 398 aa7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 ADAT2Q7Z6V5 191 aaKnown RBP7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 SLC51AQ86UW1 340 aa7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 KLHL7Q8IXQ5 586 aa7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 OGFOD1Q8N543 542 aa7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 SECISBP2LQ93073 1101 aaKnown RBP7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 DISC1Q9NRI5 854 aa7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 FAM217BQ9NTX9 383 aaPredicted RBP7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 HDAC6Q9UBN7 1215 aa7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 PCDHA1Q9Y5I3 950 aa7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 FOXP2O15409 715 aa7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 FAM13AO94988 1023 aa7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 HOXA13P31271 388 aaPredicted RBP7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 GJC1P36383 396 aa7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 LONP1P36776 959 aaKnown RBP7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 FXR1P51114 621 aaKnown RBP eCLIP7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 VPS36Q86VN1 386 aa7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 POTEDQ86YR6 584 aa7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 TPH2Q8IWU9 490 aa7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 ERMNQ8TAM6 284 aa7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 CTNNBL1Q8WYA6 563 aaPredicted RBP7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 PARD6BQ9BYG5 372 aa7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 AGXT2Q9BYV1 514 aa7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 TMEM60Q9H2L4 133 aa7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 MRPL44Q9H9J2 332 aaKnown RBP7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 PDE11AQ9HCR9 933 aa7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 DDX25Q9UHL0 483 aaKnown RBP7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 NARFQ9UHQ1 456 aa7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.82□□□□□ -1.16
RAPGEF4-214ENST00000538974 GCNT3O95395 438 aa7.81□□□□□ -1.16
RAPGEF4-214ENST00000538974 TDP2O95551 362 aa7.81□□□□□ -1.16
RAPGEF4-214ENST00000538974 APBA3O96018 575 aa7.81□□□□□ -1.16
RAPGEF4-214ENST00000538974 SLURP2P0DP57 97 aa7.81□□□□□ -1.16
RAPGEF4-214ENST00000538974 PFKFB3Q16875 520 aaPredicted RBP7.81□□□□□ -1.16
RAPGEF4-214ENST00000538974 TTC19Q6DKK2 380 aaPredicted RBP7.81□□□□□ -1.16
RAPGEF4-214ENST00000538974 CCDC65Q8IXS2 484 aa7.81□□□□□ -1.16
RAPGEF4-214ENST00000538974 GSPT2Q8IYD1 628 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms