RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 CLTBP09497 229 aa10.23□□□□□ -0.77
DDB1-212ENST00000538470 FGRP09769 529 aa10.23□□□□□ -0.77
DDB1-212ENST00000538470 PCP11498 1178 aaKnown RBP10.23□□□□□ -0.77
DDB1-212ENST00000538470 NOVP48745 357 aa10.23□□□□□ -0.77
DDB1-212ENST00000538470 NT5C2P49902 561 aa10.23□□□□□ -0.77
DDB1-212ENST00000538470 ACLYP53396 1101 aa10.23□□□□□ -0.77
DDB1-212ENST00000538470 TLE2Q04725 743 aa10.23□□□□□ -0.77
DDB1-212ENST00000538470 ACVR2BQ13705 512 aa10.23□□□□□ -0.77
DDB1-212ENST00000538470 ARMCX2Q7L311 632 aa10.23□□□□□ -0.77
DDB1-212ENST00000538470 KLHDC9Q8NEP7 349 aa10.23□□□□□ -0.77
DDB1-212ENST00000538470 NUP133Q8WUM0 1156 aa10.23□□□□□ -0.77
DDB1-212ENST00000538470 DCAF4Q8WV16 495 aa10.23□□□□□ -0.77
DDB1-212ENST00000538470 FERMT2Q96AC1 680 aa10.23□□□□□ -0.77
DDB1-212ENST00000538470 FGD4Q96M96 766 aa10.23□□□□□ -0.77
DDB1-212ENST00000538470 UPF3AQ9H1J1 476 aaKnown RBP10.23□□□□□ -0.77
DDB1-212ENST00000538470 SPC25Q9HBM1 224 aa10.23□□□□□ -0.77
DDB1-212ENST00000538470 STARD7Q9NQZ5 370 aa10.23□□□□□ -0.77
DDB1-212ENST00000538470 RNF146Q9NTX7 359 aa10.23□□□□□ -0.77
DDB1-212ENST00000538470 STX8Q9UNK0 236 aa10.23□□□□□ -0.77
DDB1-212ENST00000538470 STXBP5LQ9Y2K9 1186 aa10.23□□□□□ -0.77
DDB1-212ENST00000538470 TACC3Q9Y6A5 838 aa10.23□□□□□ -0.77
DDB1-212ENST00000538470 ZNF536O15090 1300 aa10.23□□□□□ -0.77
DDB1-212ENST00000538470 MROH7Q68CQ1 1323 aa10.23□□□□□ -0.77
DDB1-212ENST00000538470 MYH6P13533 1939 aa10.23□□□□□ -0.77
DDB1-212ENST00000538470 COL6A3P12111 3177 aa10.22□□□□□ -0.77
DDB1-212ENST00000538470 ASB14A6NK59 587 aa10.22□□□□□ -0.77
DDB1-212ENST00000538470 POTEB2H3BUK9 544 aa10.22□□□□□ -0.77
DDB1-212ENST00000538470 RANBP6O60518 1105 aaKnown RBP10.22□□□□□ -0.77
DDB1-212ENST00000538470 SLC4A3P48751 1232 aa10.22□□□□□ -0.77
DDB1-212ENST00000538470 MFAP1P55081 439 aaKnown RBP10.22□□□□□ -0.77
DDB1-212ENST00000538470 CTDSPL2Q05D32 466 aa10.22□□□□□ -0.77
DDB1-212ENST00000538470 MCMDC2Q4G0Z9 681 aa10.22□□□□□ -0.77
DDB1-212ENST00000538470 VPS53Q5VIR6 699 aa10.22□□□□□ -0.77
DDB1-212ENST00000538470 RCSD1Q6JBY9 416 aa10.22□□□□□ -0.77
DDB1-212ENST00000538470 ANKRD33Q7Z3H0 272 aa10.22□□□□□ -0.77
DDB1-212ENST00000538470 FAM133AQ8N9E0 248 aa10.22□□□□□ -0.77
DDB1-212ENST00000538470 PCSK9Q8NBP7 692 aaKnown RBP10.22□□□□□ -0.77
DDB1-212ENST00000538470 BADQ92934 168 aa10.22□□□□□ -0.77
DDB1-212ENST00000538470 LENG1Q96BZ8 264 aaPredicted RBP10.22□□□□□ -0.77
DDB1-212ENST00000538470 TOX2Q96NM4 488 aa10.22□□□□□ -0.77
DDB1-212ENST00000538470 A1CFQ9NQ94 594 aaKnown RBP10.22□□□□□ -0.77
DDB1-212ENST00000538470 IL17RBQ9NRM6 502 aa10.22□□□□□ -0.77
DDB1-212ENST00000538470 HOMER2Q9NSB8 354 aa10.22□□□□□ -0.77
DDB1-212ENST00000538470 MTMR10Q9NXD2 777 aa10.22□□□□□ -0.77
DDB1-212ENST00000538470 ELP1O95163 1332 aa10.22□□□□□ -0.77
DDB1-212ENST00000538470 CCDC171Q6TFL3 1326 aa10.22□□□□□ -0.77
DDB1-212ENST00000538470 LOC102724159A0A0B4J2E5 919 aa10.21□□□□□ -0.77
DDB1-212ENST00000538470 A0A0D9SFI3 127 aa10.21□□□□□ -0.77
DDB1-212ENST00000538470 TRIM43BA6NCK2 446 aa10.21□□□□□ -0.77
DDB1-212ENST00000538470 KIAA0355O15063 1070 aa10.21□□□□□ -0.77
DDB1-212ENST00000538470 ICAM1P05362 532 aa10.21□□□□□ -0.77
DDB1-212ENST00000538470 MCCP23508 829 aa10.21□□□□□ -0.77
DDB1-212ENST00000538470 GJA9P57773 515 aa10.21□□□□□ -0.77
DDB1-212ENST00000538470 NKX3-2P78367 333 aa10.21□□□□□ -0.77
DDB1-212ENST00000538470 PWP2Q15269 919 aaKnown RBP10.21□□□□□ -0.77
DDB1-212ENST00000538470 CCSAPQ6IQ19 270 aaPredicted RBP10.21□□□□□ -0.77
DDB1-212ENST00000538470 KCTD1Q719H9 257 aa10.21□□□□□ -0.77
DDB1-212ENST00000538470 Q7L0L9 218 aa10.21□□□□□ -0.77
DDB1-212ENST00000538470 SMC5Q8IY18 1101 aa10.21□□□□□ -0.77
DDB1-212ENST00000538470 CCDC144CPQ8IYA2 1237 aa10.21□□□□□ -0.77
DDB1-212ENST00000538470 TRIM43Q96BQ3 446 aaPredicted RBP10.21□□□□□ -0.77
DDB1-212ENST00000538470 FAM227BQ96M60 508 aa10.21□□□□□ -0.77
DDB1-212ENST00000538470 GLT1D1Q96MS3 346 aa10.21□□□□□ -0.77
DDB1-212ENST00000538470 KATNBL1Q9H079 304 aa10.21□□□□□ -0.77
DDB1-212ENST00000538470 TCP11L1Q9NUJ3 509 aa10.21□□□□□ -0.77
DDB1-212ENST00000538470 PNMA2Q9UL42 364 aa10.21□□□□□ -0.77
DDB1-212ENST00000538470 PRR12Q9ULL5 1215 aa10.21□□□□□ -0.77
DDB1-212ENST00000538470 TMEM265A0A087WTH1 108 aa10.2□□□□□ -0.78
DDB1-212ENST00000538470 A0A0U1RQG5 324 aaPredicted RBP10.2□□□□□ -0.78
DDB1-212ENST00000538470 DCDC2CA8MYV0 355 aa10.2□□□□□ -0.78
DDB1-212ENST00000538470 NMT2O60551 498 aa10.2□□□□□ -0.78
DDB1-212ENST00000538470 PQBP1O60828 265 aaKnown RBP10.2□□□□□ -0.78
DDB1-212ENST00000538470 FGAP02671 866 aa10.2□□□□□ -0.78
DDB1-212ENST00000538470 C6orf222P0C671 652 aaPredicted RBP10.2□□□□□ -0.78
DDB1-212ENST00000538470 HSPD1P10809 573 aaKnown RBP10.2□□□□□ -0.78
DDB1-212ENST00000538470 TOP1P11387 765 aaKnown RBP10.2□□□□□ -0.78
DDB1-212ENST00000538470 ALAS1P13196 640 aa10.2□□□□□ -0.78
DDB1-212ENST00000538470 RAG1P15918 1043 aa10.2□□□□□ -0.78
DDB1-212ENST00000538470 SMAD3P84022 425 aaKnown RBP10.2□□□□□ -0.78
DDB1-212ENST00000538470 NMIQ13287 307 aaPredicted RBP10.2□□□□□ -0.78
DDB1-212ENST00000538470 KCNA10Q16322 511 aa10.2□□□□□ -0.78
DDB1-212ENST00000538470 CCDC96Q2M329 555 aa10.2□□□□□ -0.78
DDB1-212ENST00000538470 CCDC144BQ3MJ40 725 aa10.2□□□□□ -0.78
DDB1-212ENST00000538470 ZNF697Q5TEC3 545 aa10.2□□□□□ -0.78
DDB1-212ENST00000538470 BTNL9Q6UXG8 535 aa10.2□□□□□ -0.78
DDB1-212ENST00000538470 SH3RF1Q7Z6J0 888 aa10.2□□□□□ -0.78
DDB1-212ENST00000538470 ZNF589Q86UQ0 364 aaPredicted RBP10.2□□□□□ -0.78
DDB1-212ENST00000538470 AGBL1Q96MI9 1066 aa10.2□□□□□ -0.78
DDB1-212ENST00000538470 TRERF1Q96PN7 1200 aa10.2□□□□□ -0.78
DDB1-212ENST00000538470 LNPKQ9C0E8 428 aa10.2□□□□□ -0.78
DDB1-212ENST00000538470 RANBP17Q9H2T7 1088 aaKnown RBP10.2□□□□□ -0.78
DDB1-212ENST00000538470 RWDD1Q9H446 243 aaPredicted RBP10.2□□□□□ -0.78
DDB1-212ENST00000538470 OSBPL3Q9H4L5 887 aa10.2□□□□□ -0.78
DDB1-212ENST00000538470 RNF41Q9H4P4 317 aaPredicted RBP10.2□□□□□ -0.78
DDB1-212ENST00000538470 TOMM22Q9NS69 142 aa10.2□□□□□ -0.78
DDB1-212ENST00000538470 CYP39A1Q9NYL5 469 aa10.2□□□□□ -0.78
DDB1-212ENST00000538470 CCPG1Q9ULG6 757 aa10.2□□□□□ -0.78
DDB1-212ENST00000538470 WDR19Q8NEZ3 1342 aa10.19□□□□□ -0.78
DDB1-212ENST00000538470 MYADML2A6NDP7 307 aa10.19□□□□□ -0.78
DDB1-212ENST00000538470 ADCY6O43306 1168 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms