RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 TMEM67Q5HYA8 995 aa13.44□□□□□ -0.26
CLPB-208ENST00000538021 ARMCX2Q7L311 632 aa13.44□□□□□ -0.26
CLPB-208ENST00000538021 ZNF467Q7Z7K2 595 aaPredicted RBP13.44□□□□□ -0.26
CLPB-208ENST00000538021 ANKRD35Q8N283 1001 aa13.44□□□□□ -0.26
CLPB-208ENST00000538021 KHSRPQ92945 711 aaKnown RBP eCLIP13.44□□□□□ -0.26
CLPB-208ENST00000538021 HLA-CQ95604 372 aa13.44□□□□□ -0.26
CLPB-208ENST00000538021 SCLYQ96I15 445 aa13.44□□□□□ -0.26
CLPB-208ENST00000538021 NUP88Q99567 741 aaPredicted RBP13.44□□□□□ -0.26
CLPB-208ENST00000538021 SLF1Q9BQI6 1058 aa13.44□□□□□ -0.26
CLPB-208ENST00000538021 TRPV6Q9H1D0 765 aa13.44□□□□□ -0.26
CLPB-208ENST00000538021 WNT8AQ9H1J5 351 aa13.44□□□□□ -0.26
CLPB-208ENST00000538021 ARMT1Q9H993 441 aa13.44□□□□□ -0.26
CLPB-208ENST00000538021 KANSL2Q9H9L4 492 aa13.44□□□□□ -0.26
CLPB-208ENST00000538021 C11orf16Q9NQ32 467 aa13.44□□□□□ -0.26
CLPB-208ENST00000538021 CTDP1Q9Y5B0 961 aaPredicted RBP13.44□□□□□ -0.26
CLPB-208ENST00000538021 LRRC37A2A6NM11 1700 aa13.44□□□□□ -0.26
CLPB-208ENST00000538021 SMIM22K7EJ46 135 aa13.43□□□□□ -0.26
CLPB-208ENST00000538021 CTAGE5O15320 804 aa13.43□□□□□ -0.26
CLPB-208ENST00000538021 CDK8P49336 464 aa13.43□□□□□ -0.26
CLPB-208ENST00000538021 TTF1Q15361 905 aaPredicted RBP13.43□□□□□ -0.26
CLPB-208ENST00000538021 AACSQ86V21 672 aa13.43□□□□□ -0.26
CLPB-208ENST00000538021 AMOTL1Q8IY63 956 aa13.43□□□□□ -0.26
CLPB-208ENST00000538021 SLC43A3Q8NBI5 491 aa13.43□□□□□ -0.26
CLPB-208ENST00000538021 ARNTL2Q8WYA1 636 aa13.43□□□□□ -0.26
CLPB-208ENST00000538021 NOC4LQ9BVI4 516 aaKnown RBP13.43□□□□□ -0.26
CLPB-208ENST00000538021 NOP58Q9Y2X3 529 aaKnown RBP13.43□□□□□ -0.26
CLPB-208ENST00000538021 MCM3APO60318 1980 aa13.42□□□□□ -0.26
CLPB-208ENST00000538021 CYP2D7A0A087X1C5 515 aa13.42□□□□□ -0.26
CLPB-208ENST00000538021 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.42□□□□□ -0.26
CLPB-208ENST00000538021 EPOPA6NHQ4 379 aa13.42□□□□□ -0.26
CLPB-208ENST00000538021 PRKAB2O43741 272 aa13.42□□□□□ -0.26
CLPB-208ENST00000538021 B4GALT4O60513 344 aa13.42□□□□□ -0.26
CLPB-208ENST00000538021 CABYRO75952 493 aa13.42□□□□□ -0.26
CLPB-208ENST00000538021 POU3F3P20264 500 aaPredicted RBP13.42□□□□□ -0.26
CLPB-208ENST00000538021 TNFAIP2Q03169 654 aa13.42□□□□□ -0.26
CLPB-208ENST00000538021 TTLL4Q14679 1199 aa13.42□□□□□ -0.26
CLPB-208ENST00000538021 CCDC144CPQ8IYA2 1237 aa13.42□□□□□ -0.26
CLPB-208ENST00000538021 MUC6Q6W4X9 2439 aa13.42□□□□□ -0.26
CLPB-208ENST00000538021 PIEZO1Q92508 2521 aa13.42□□□□□ -0.26
CLPB-208ENST00000538021 GOLIM4O00461 696 aa13.41□□□□□ -0.26
CLPB-208ENST00000538021 ZBED4O75132 1171 aa13.41□□□□□ -0.26
CLPB-208ENST00000538021 FSCN1Q16658 493 aaKnown RBP13.41□□□□□ -0.26
CLPB-208ENST00000538021 DEFB128Q7Z7B8 93 aa13.41□□□□□ -0.26
CLPB-208ENST00000538021 TLK2Q86UE8 772 aa13.41□□□□□ -0.26
CLPB-208ENST00000538021 TMEM57Q8N5G2 664 aa13.41□□□□□ -0.26
CLPB-208ENST00000538021 FGD4Q96M96 766 aa13.41□□□□□ -0.26
CLPB-208ENST00000538021 DNAJC2Q99543 621 aaKnown RBP13.41□□□□□ -0.26
CLPB-208ENST00000538021 AP5M1Q9H0R1 490 aa13.41□□□□□ -0.26
CLPB-208ENST00000538021 RAVER2Q9HCJ3 691 aaKnown RBP13.41□□□□□ -0.26
CLPB-208ENST00000538021 ASTN1O14525 1302 aa13.4□□□□□ -0.26
CLPB-208ENST00000538021 GRIN2DO15399 1336 aa13.4□□□□□ -0.26
CLPB-208ENST00000538021 TCRBV5S4A2TA0A5A2 114 aa13.4□□□□□ -0.26
CLPB-208ENST00000538021 USP17L12C9JPN9 530 aa13.4□□□□□ -0.26
CLPB-208ENST00000538021 USP17L21D6R901 530 aa13.4□□□□□ -0.26
CLPB-208ENST00000538021 DYNC1LI2O43237 492 aaPredicted RBP13.4□□□□□ -0.26
CLPB-208ENST00000538021 ZEB2O60315 1214 aa13.4□□□□□ -0.26
CLPB-208ENST00000538021 MBD4O95243 580 aa13.4□□□□□ -0.26
CLPB-208ENST00000538021 PTGS1P23219 599 aa13.4□□□□□ -0.26
CLPB-208ENST00000538021 PSMC6P62333 389 aa13.4□□□□□ -0.26
CLPB-208ENST00000538021 NKX3-2P78367 333 aa13.4□□□□□ -0.26
CLPB-208ENST00000538021 C12orf60Q5U649 245 aa13.4□□□□□ -0.26
CLPB-208ENST00000538021 C16orf86Q6ZW13 317 aa13.4□□□□□ -0.26
CLPB-208ENST00000538021 PRPF38AQ8NAV1 312 aaKnown RBP13.4□□□□□ -0.26
CLPB-208ENST00000538021 KIFC2Q96AC6 838 aa13.4□□□□□ -0.26
CLPB-208ENST00000538021 AGBL1Q96MI9 1066 aa13.4□□□□□ -0.26
CLPB-208ENST00000538021 KATNBL1Q9H079 304 aa13.4□□□□□ -0.26
CLPB-208ENST00000538021 ATP8A2Q9NTI2 1148 aa13.4□□□□□ -0.26
CLPB-208ENST00000538021 BAZ2AQ9UIF9 1905 aaKnown RBP13.39□□□□□ -0.27
CLPB-208ENST00000538021 F5H6K3 240 aa13.39□□□□□ -0.27
CLPB-208ENST00000538021 PI4K2BG5E9Z4 385 aa13.39□□□□□ -0.27
CLPB-208ENST00000538021 PFKMP08237 780 aa13.39□□□□□ -0.27
CLPB-208ENST00000538021 ACTN1P12814 892 aa13.39□□□□□ -0.27
CLPB-208ENST00000538021 CNTN2Q02246 1040 aa13.39□□□□□ -0.27
CLPB-208ENST00000538021 KLRC3Q07444 240 aa13.39□□□□□ -0.27
CLPB-208ENST00000538021 SLFNL1Q499Z3 407 aa13.39□□□□□ -0.27
CLPB-208ENST00000538021 VWCEQ96DN2 955 aa13.39□□□□□ -0.27
CLPB-208ENST00000538021 DDRGK1Q96HY6 314 aa13.39□□□□□ -0.27
CLPB-208ENST00000538021 UIMC1Q96RL1 719 aa13.39□□□□□ -0.27
CLPB-208ENST00000538021 SEZ6LQ9BYH1 1024 aa13.39□□□□□ -0.27
CLPB-208ENST00000538021 BCL11AQ9H165 835 aa13.39□□□□□ -0.27
CLPB-208ENST00000538021 CD320Q9NPF0 282 aa13.39□□□□□ -0.27
CLPB-208ENST00000538021 HOMER2Q9NSB8 354 aa13.39□□□□□ -0.27
CLPB-208ENST00000538021 FBXO40Q9UH90 709 aa13.39□□□□□ -0.27
CLPB-208ENST00000538021 GNEQ9Y223 722 aaKnown RBP13.39□□□□□ -0.27
CLPB-208ENST00000538021 EXOC6BQ9Y2D4 811 aa13.39□□□□□ -0.27
CLPB-208ENST00000538021 KIF28PB7ZC32 967 aa13.38□□□□□ -0.27
CLPB-208ENST00000538021 ATP2A1O14983 1001 aa13.38□□□□□ -0.27
CLPB-208ENST00000538021 ARHGEF15O94989 841 aa13.38□□□□□ -0.27
CLPB-208ENST00000538021 NDUFB10O96000 172 aa13.38□□□□□ -0.27
CLPB-208ENST00000538021 CYP2C9P11712 490 aa13.38□□□□□ -0.27
CLPB-208ENST00000538021 TAP1Q03518 808 aa13.38□□□□□ -0.27
CLPB-208ENST00000538021 GRB10Q13322 594 aa13.38□□□□□ -0.27
CLPB-208ENST00000538021 CHST13Q8NET6 341 aa13.38□□□□□ -0.27
CLPB-208ENST00000538021 SLC9A7Q96T83 725 aa13.38□□□□□ -0.27
CLPB-208ENST00000538021 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.38□□□□□ -0.27
CLPB-208ENST00000538021 IL1RAPL2Q9NP60 686 aa13.38□□□□□ -0.27
CLPB-208ENST00000538021 TRMT13Q9NUP7 481 aaKnown RBP13.38□□□□□ -0.27
CLPB-208ENST00000538021 WDFY4Q6ZS81 3184 aa13.37□□□□□ -0.27
CLPB-208ENST00000538021 PRR33A8MZF0 331 aa13.37□□□□□ -0.27
CLPB-208ENST00000538021 SMPD1P17405 629 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms