RNA–Protein interactions for RNA: ENST00000537971.5

TSPAN9-206, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPAN9, Length 4,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-206ENST00000537971 ARRDC4Q8NCT1 418 aa13.92□□□□□ -0.18
TSPAN9-206ENST00000537971 OSBPL3Q9H4L5 887 aa13.92□□□□□ -0.18
TSPAN9-206ENST00000537971 STAG1Q8WVM7 1258 aa13.91□□□□□ -0.18
TSPAN9-206ENST00000537971 SNX21Q969T3 373 aa13.91□□□□□ -0.18
TSPAN9-206ENST00000537971 CEP95Q96GE4 821 aa13.91□□□□□ -0.18
TSPAN9-206ENST00000537971 ARFGEF1Q9Y6D6 1849 aa13.91□□□□□ -0.18
TSPAN9-206ENST00000537971 VCAM1P19320 739 aa13.91□□□□□ -0.18
TSPAN9-206ENST00000537971 RTN1Q16799 776 aa13.91□□□□□ -0.18
TSPAN9-206ENST00000537971 TKFCQ3LXA3 575 aa13.91□□□□□ -0.18
TSPAN9-206ENST00000537971 CCDC183Q5T5S1 534 aa13.91□□□□□ -0.18
TSPAN9-206ENST00000537971 ISM2Q6H9L7 571 aa13.91□□□□□ -0.18
TSPAN9-206ENST00000537971 KCTD1Q719H9 257 aa13.91□□□□□ -0.18
TSPAN9-206ENST00000537971 ACER1Q8TDN7 264 aa13.91□□□□□ -0.18
TSPAN9-206ENST00000537971 GLT8D2Q9H1C3 349 aa13.91□□□□□ -0.18
TSPAN9-206ENST00000537971 ACAD9Q9H845 621 aa13.91□□□□□ -0.18
TSPAN9-206ENST00000537971 RFX7Q2KHR2 1363 aa13.91□□□□□ -0.18
TSPAN9-206ENST00000537971 KLHL40Q2TBA0 621 aa13.91□□□□□ -0.18
TSPAN9-206ENST00000537971 SCAND2PQ9GZW5 306 aaPredicted RBP13.91□□□□□ -0.18
TSPAN9-206ENST00000537971 SLC45A1Q9Y2W3 748 aa13.91□□□□□ -0.18
TSPAN9-206ENST00000537971 FRMPD2Q68DX3 1309 aaPredicted RBP13.9□□□□□ -0.18
TSPAN9-206ENST00000537971 ZNF830Q96NB3 372 aaPredicted RBP13.9□□□□□ -0.18
TSPAN9-206ENST00000537971 MCOLN1Q9GZU1 580 aa13.9□□□□□ -0.18
TSPAN9-206ENST00000537971 SH2B1Q9NRF2 756 aaPredicted RBP13.9□□□□□ -0.18
TSPAN9-206ENST00000537971 ASB14A6NK59 587 aa13.9□□□□□ -0.18
TSPAN9-206ENST00000537971 CFBP00751 764 aa13.9□□□□□ -0.18
TSPAN9-206ENST00000537971 GSPT1P15170 499 aaKnown RBP13.9□□□□□ -0.18
TSPAN9-206ENST00000537971 DDIT3P35638 169 aa13.9□□□□□ -0.18
TSPAN9-206ENST00000537971 ZHX3Q9H4I2 956 aa13.9□□□□□ -0.18
TSPAN9-206ENST00000537971 TMX2Q9Y320 296 aa13.9□□□□□ -0.18
TSPAN9-206ENST00000537971 CPA1P15085 419 aa13.9□□□□□ -0.18
TSPAN9-206ENST00000537971 ERVK-9P63128 1117 aa13.9□□□□□ -0.18
TSPAN9-206ENST00000537971 ERVK-24P63145 666 aa13.9□□□□□ -0.18
TSPAN9-206ENST00000537971 FILIP1LQ4L180 1135 aa13.9□□□□□ -0.18
TSPAN9-206ENST00000537971 KLHL10Q6JEL2 608 aa13.9□□□□□ -0.18
TSPAN9-206ENST00000537971 DGKHQ86XP1 1220 aa13.9□□□□□ -0.18
TSPAN9-206ENST00000537971 CDAN1Q8IWY9 1227 aa13.9□□□□□ -0.18
TSPAN9-206ENST00000537971 BRF1Q92994 677 aa13.9□□□□□ -0.18
TSPAN9-206ENST00000537971 C8orf76Q96K31 380 aa13.9□□□□□ -0.18
TSPAN9-206ENST00000537971 RAVER2Q9HCJ3 691 aaKnown RBP13.9□□□□□ -0.18
TSPAN9-206ENST00000537971 RNF146Q9NTX7 359 aa13.9□□□□□ -0.18
TSPAN9-206ENST00000537971 RBM28Q9NW13 759 aaKnown RBP13.9□□□□□ -0.18
TSPAN9-206ENST00000537971 CD2BP2O95400 341 aaKnown RBP13.9□□□□□ -0.19
TSPAN9-206ENST00000537971 GNPTABQ3T906 1256 aa13.9□□□□□ -0.19
TSPAN9-206ENST00000537971 FAM47CQ5HY64 1035 aa13.9□□□□□ -0.19
TSPAN9-206ENST00000537971 ADGRA1Q86SQ6 560 aa13.9□□□□□ -0.19
TSPAN9-206ENST00000537971 AFG3L2Q9Y4W6 797 aa13.9□□□□□ -0.19
TSPAN9-206ENST00000537971 ANKRD31Q8N7Z5 1873 aa13.89□□□□□ -0.19
TSPAN9-206ENST00000537971 A0A0G2JLL6 359 aaPredicted RBP13.89□□□□□ -0.19
TSPAN9-206ENST00000537971 FLT3LGP49771 235 aa13.89□□□□□ -0.19
TSPAN9-206ENST00000537971 METAP2P50579 478 aaKnown RBP eCLIP13.89□□□□□ -0.19
TSPAN9-206ENST00000537971 ZSCAN23Q3MJ62 389 aa13.89□□□□□ -0.19
TSPAN9-206ENST00000537971 ARHGEF16Q5VV41 709 aa13.89□□□□□ -0.19
TSPAN9-206ENST00000537971 PRRT2Q7Z6L0 340 aaPredicted RBP13.89□□□□□ -0.19
TSPAN9-206ENST00000537971 TEPSINQ96N21 525 aa13.89□□□□□ -0.19
TSPAN9-206ENST00000537971 MTMR4Q9NYA4 1195 aa13.89□□□□□ -0.19
TSPAN9-206ENST00000537971 TNKSO95271 1327 aa13.89□□□□□ -0.19
TSPAN9-206ENST00000537971 TXLNAP40222 546 aa13.89□□□□□ -0.19
TSPAN9-206ENST00000537971 HEATR3Q7Z4Q2 680 aa13.89□□□□□ -0.19
TSPAN9-206ENST00000537971 FCHSD1Q86WN1 690 aa13.89□□□□□ -0.19
TSPAN9-206ENST00000537971 AMNQ9BXJ7 453 aa13.89□□□□□ -0.19
TSPAN9-206ENST00000537971 NOP56O00567 594 aaKnown RBP13.89□□□□□ -0.19
TSPAN9-206ENST00000537971 MSCO60682 206 aa13.89□□□□□ -0.19
TSPAN9-206ENST00000537971 NDUFB10O96000 172 aa13.89□□□□□ -0.19
TSPAN9-206ENST00000537971 MYCLP12524 364 aaPredicted RBP13.89□□□□□ -0.19
TSPAN9-206ENST00000537971 NAPAP54920 295 aa13.89□□□□□ -0.19
TSPAN9-206ENST00000537971 SLFNL1Q499Z3 407 aa13.89□□□□□ -0.19
TSPAN9-206ENST00000537971 CCDC148Q8NFR7 591 aa13.89□□□□□ -0.19
TSPAN9-206ENST00000537971 ATG4CQ96DT6 458 aa13.89□□□□□ -0.19
TSPAN9-206ENST00000537971 NRXN2Q9P2S2 1712 aa13.88□□□□□ -0.19
TSPAN9-206ENST00000537971 SGSM2O43147 1006 aa13.88□□□□□ -0.19
TSPAN9-206ENST00000537971 RARBP10826 455 aa13.88□□□□□ -0.19
TSPAN9-206ENST00000537971 TRMT1Q9NXH9 659 aaKnown RBP13.88□□□□□ -0.19
TSPAN9-206ENST00000537971 SRRDQ9UH36 339 aa13.88□□□□□ -0.19
TSPAN9-206ENST00000537971 ZNF112Q9UJU3 913 aa13.88□□□□□ -0.19
TSPAN9-206ENST00000537971 ORC4O43929 436 aa13.88□□□□□ -0.19
TSPAN9-206ENST00000537971 SHMT1P34896 483 aa13.88□□□□□ -0.19
TSPAN9-206ENST00000537971 LACTBP83111 547 aaPredicted RBP13.88□□□□□ -0.19
TSPAN9-206ENST00000537971 TEX35Q5T0J7 233 aa13.88□□□□□ -0.19
TSPAN9-206ENST00000537971 CHST13Q8NET6 341 aa13.88□□□□□ -0.19
TSPAN9-206ENST00000537971 CAGE1Q8TC20 777 aa13.88□□□□□ -0.19
TSPAN9-206ENST00000537971 ABHD8Q96I13 439 aa13.88□□□□□ -0.19
TSPAN9-206ENST00000537971 KLF18A0A0U1RQI7 1052 aa13.88□□□□□ -0.19
TSPAN9-206ENST00000537971 SSBP05455 408 aaKnown RBP eCLIP13.88□□□□□ -0.19
TSPAN9-206ENST00000537971 COL11A2P13942 1736 aaPredicted RBP13.87□□□□□ -0.19
TSPAN9-206ENST00000537971 RASA1P20936 1047 aa13.87□□□□□ -0.19
TSPAN9-206ENST00000537971 HSP90B2PQ58FF3 399 aa13.87□□□□□ -0.19
TSPAN9-206ENST00000537971 CDK5RAP3Q96JB5 506 aa13.87□□□□□ -0.19
TSPAN9-206ENST00000537971 MAP7D2Q96T17 732 aa13.87□□□□□ -0.19
TSPAN9-206ENST00000537971 NUP88Q99567 741 aaPredicted RBP13.87□□□□□ -0.19
TSPAN9-206ENST00000537971 KLRF2D3W0D1 207 aa13.87□□□□□ -0.19
TSPAN9-206ENST00000537971 SOX10P56693 466 aa13.87□□□□□ -0.19
TSPAN9-206ENST00000537971 DHX8Q14562 1220 aaKnown RBP13.87□□□□□ -0.19
TSPAN9-206ENST00000537971 CREB3L3Q68CJ9 461 aa13.87□□□□□ -0.19
TSPAN9-206ENST00000537971 RNF180Q86T96 592 aa13.87□□□□□ -0.19
TSPAN9-206ENST00000537971 TRERF1Q96PN7 1200 aa13.87□□□□□ -0.19
TSPAN9-206ENST00000537971 SPATC1LQ9H0A9 340 aa13.87□□□□□ -0.19
TSPAN9-206ENST00000537971 SCN4AP35499 1836 aa13.87□□□□□ -0.19
TSPAN9-206ENST00000537971 IGF2BP3O00425 579 aaKnown RBP eCLIP13.87□□□□□ -0.19
TSPAN9-206ENST00000537971 HMGCRP04035 888 aa13.87□□□□□ -0.19
TSPAN9-206ENST00000537971 DUOX1Q9NRD9 1551 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms