RNA–Protein interactions for RNA: ENST00000537642.1

USP28-204, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 732 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-204ENST00000537642 GPCPD1Q9NPB8 672 aa17.39■□□□□ 0.37
USP28-204ENST00000537642 HOMER2Q9NSB8 354 aa17.39■□□□□ 0.37
USP28-204ENST00000537642 FBXO40Q9UH90 709 aa17.39■□□□□ 0.37
USP28-204ENST00000537642 MSCO60682 206 aa17.38■□□□□ 0.37
USP28-204ENST00000537642 CYP21A2P08686 494 aa17.38■□□□□ 0.37
USP28-204ENST00000537642 ZNF543Q08ER8 600 aa17.38■□□□□ 0.37
USP28-204ENST00000537642 SYDE2Q5VT97 1194 aa17.38■□□□□ 0.37
USP28-204ENST00000537642 ENAHQ8N8S7 591 aaPredicted RBP17.38■□□□□ 0.37
USP28-204ENST00000537642 ZSCAN10Q96SZ4 725 aaPredicted RBP17.38■□□□□ 0.37
USP28-204ENST00000537642 RANBP17Q9H2T7 1088 aaKnown RBP17.38■□□□□ 0.37
USP28-204ENST00000537642 RNF146Q9NTX7 359 aa17.38■□□□□ 0.37
USP28-204ENST00000537642 U3KPZ7 1027 aaPredicted RBP17.38■□□□□ 0.37
USP28-204ENST00000537642 MCM3APO60318 1980 aa17.38■□□□□ 0.37
USP28-204ENST00000537642 H0YGN5 161 aa17.37■□□□□ 0.37
USP28-204ENST00000537642 SEPT4O43236 478 aa17.37■□□□□ 0.37
USP28-204ENST00000537642 ALAS1P13196 640 aa17.37■□□□□ 0.37
USP28-204ENST00000537642 TAL1P17542 331 aaPredicted RBP17.37■□□□□ 0.37
USP28-204ENST00000537642 TKFCQ3LXA3 575 aa17.37■□□□□ 0.37
USP28-204ENST00000537642 ANKRD35Q8N283 1001 aa17.37■□□□□ 0.37
USP28-204ENST00000537642 PNMA1Q8ND90 353 aa17.37■□□□□ 0.37
USP28-204ENST00000537642 FGD4Q96M96 766 aa17.37■□□□□ 0.37
USP28-204ENST00000537642 TRERF1Q96PN7 1200 aa17.37■□□□□ 0.37
USP28-204ENST00000537642 C11orf49Q9H6J7 331 aa17.37■□□□□ 0.37
USP28-204ENST00000537642 ACAD9Q9H845 621 aa17.37■□□□□ 0.37
USP28-204ENST00000537642 TAF6LQ9Y6J9 622 aa17.37■□□□□ 0.37
USP28-204ENST00000537642 TNKSO95271 1327 aa17.37■□□□□ 0.37
USP28-204ENST00000537642 COL6A1P12109 1028 aa17.36■□□□□ 0.37
USP28-204ENST00000537642 BMP2KLQ5H9B9 411 aa17.36■□□□□ 0.37
USP28-204ENST00000537642 ANO1Q5XXA6 986 aa17.36■□□□□ 0.37
USP28-204ENST00000537642 CYB5R4Q7L1T6 521 aa17.36■□□□□ 0.37
USP28-204ENST00000537642 MAP4K1Q92918 833 aa17.36■□□□□ 0.37
USP28-204ENST00000537642 A1CFQ9NQ94 594 aaKnown RBP17.36■□□□□ 0.37
USP28-204ENST00000537642 NRBP1Q9UHY1 535 aa17.36■□□□□ 0.37
USP28-204ENST00000537642 CCPG1Q9ULG6 757 aa17.36■□□□□ 0.37
USP28-204ENST00000537642 PFASO15067 1338 aa17.36■□□□□ 0.37
USP28-204ENST00000537642 ICAM1P05362 532 aa17.35■□□□□ 0.37
USP28-204ENST00000537642 MUM1L1Q5H9M0 696 aa17.35■□□□□ 0.37
USP28-204ENST00000537642 MAMDC4Q6UXC1 1216 aa17.35■□□□□ 0.37
USP28-204ENST00000537642 ZNF467Q7Z7K2 595 aaPredicted RBP17.35■□□□□ 0.37
USP28-204ENST00000537642 MSL3Q8N5Y2 521 aaKnown RBP17.35■□□□□ 0.37
USP28-204ENST00000537642 ESYT1Q9BSJ8 1104 aa17.35■□□□□ 0.37
USP28-204ENST00000537642 UBAC1Q9BSL1 405 aa17.35■□□□□ 0.37
USP28-204ENST00000537642 KAT14Q9H8E8 782 aa17.35■□□□□ 0.37
USP28-204ENST00000537642 RBM8AQ9Y5S9 174 aaKnown RBP17.35■□□□□ 0.37
USP28-204ENST00000537642 E7EWF7 191 aa17.34■□□□□ 0.37
USP28-204ENST00000537642 EVI5O60447 810 aa17.34■□□□□ 0.37
USP28-204ENST00000537642 SNAI1O95863 264 aaPredicted RBP17.34■□□□□ 0.37
USP28-204ENST00000537642 LCTP09848 1927 aa17.34■□□□□ 0.37
USP28-204ENST00000537642 ZNF865P0CJ78 1059 aaPredicted RBP17.34■□□□□ 0.37
USP28-204ENST00000537642 GOLGA8HP0CJ92 632 aa17.34■□□□□ 0.37
USP28-204ENST00000537642 CNTN2Q02246 1040 aa17.34■□□□□ 0.37
USP28-204ENST00000537642 SEC23AQ15436 765 aa17.34■□□□□ 0.37
USP28-204ENST00000537642 GPATCH4Q5T3I0 446 aaKnown RBP17.34■□□□□ 0.37
USP28-204ENST00000537642 STOX1Q6ZVD7 989 aa17.34■□□□□ 0.37
USP28-204ENST00000537642 FAM133AQ8N9E0 248 aa17.34■□□□□ 0.37
USP28-204ENST00000537642 CCDC136Q96JN2 1154 aa17.34■□□□□ 0.37
USP28-204ENST00000537642 SYNGAP1Q96PV0 1343 aa17.34■□□□□ 0.37
USP28-204ENST00000537642 LSG1Q9H089 658 aaKnown RBP17.34■□□□□ 0.37
USP28-204ENST00000537642 TRDNQ13061 729 aa17.33■□□□□ 0.36
USP28-204ENST00000537642 IFIT1BQ5T764 474 aaKnown RBP17.33■□□□□ 0.36
USP28-204ENST00000537642 UBA5Q9GZZ9 404 aa17.33■□□□□ 0.36
USP28-204ENST00000537642 CPVLQ9H3G5 476 aa17.33■□□□□ 0.36
USP28-204ENST00000537642 CNPY2Q9Y2B0 182 aa17.33■□□□□ 0.36
USP28-204ENST00000537642 NR2E3Q9Y5X4 410 aa17.33■□□□□ 0.36
USP28-204ENST00000537642 POTEB2H3BUK9 544 aa17.32■□□□□ 0.36
USP28-204ENST00000537642 DNM1LO00429 736 aa17.32■□□□□ 0.36
USP28-204ENST00000537642 GJC2Q5T442 439 aaPredicted RBP17.32■□□□□ 0.36
USP28-204ENST00000537642 KIAA1211Q6ZU35 1233 aa17.32■□□□□ 0.36
USP28-204ENST00000537642 CYP39A1Q9NYL5 469 aa17.32■□□□□ 0.36
USP28-204ENST00000537642 ASTN1O14525 1302 aa17.31■□□□□ 0.36
USP28-204ENST00000537642 SOWAHBA6NEL2 793 aa17.31■□□□□ 0.36
USP28-204ENST00000537642 ASPRV1Q53RT3 343 aa17.31■□□□□ 0.36
USP28-204ENST00000537642 ARMCX2Q7L311 632 aa17.31■□□□□ 0.36
USP28-204ENST00000537642 RALYLQ86SE5 291 aaKnown RBP17.31■□□□□ 0.36
USP28-204ENST00000537642 ARRDC4Q8NCT1 418 aa17.31■□□□□ 0.36
USP28-204ENST00000537642 NCOA7Q8NI08 942 aa17.31■□□□□ 0.36
USP28-204ENST00000537642 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.31■□□□□ 0.36
USP28-204ENST00000537642 MYH6P13533 1939 aa17.31■□□□□ 0.36
USP28-204ENST00000537642 WDR19Q8NEZ3 1342 aa17.3■□□□□ 0.36
USP28-204ENST00000537642 NFIBO00712 420 aa17.3■□□□□ 0.36
USP28-204ENST00000537642 PARP1P09874 1014 aaKnown RBP17.3■□□□□ 0.36
USP28-204ENST00000537642 RARBP10826 455 aa17.3■□□□□ 0.36
USP28-204ENST00000537642 AKR1A1P14550 325 aa17.3■□□□□ 0.36
USP28-204ENST00000537642 LRRC41Q15345 812 aa17.3■□□□□ 0.36
USP28-204ENST00000537642 LRRC26Q2I0M4 334 aa17.3■□□□□ 0.36
USP28-204ENST00000537642 NSMFQ6X4W1 530 aa17.3■□□□□ 0.36
USP28-204ENST00000537642 CHST3Q7LGC8 479 aa17.3■□□□□ 0.36
USP28-204ENST00000537642 CCDC144CPQ8IYA2 1237 aa17.3■□□□□ 0.36
USP28-204ENST00000537642 C7orf61Q8IZ16 206 aa17.3■□□□□ 0.36
USP28-204ENST00000537642 CLEC4DQ8WXI8 215 aa17.3■□□□□ 0.36
USP28-204ENST00000537642 LENG1Q96BZ8 264 aaPredicted RBP17.3■□□□□ 0.36
USP28-204ENST00000537642 SENP6Q9GZR1 1112 aaPredicted RBP17.3■□□□□ 0.36
USP28-204ENST00000537642 KATNBL1Q9H079 304 aa17.3■□□□□ 0.36
USP28-204ENST00000537642 SENP2Q9HC62 589 aa17.3■□□□□ 0.36
USP28-204ENST00000537642 ZHX1Q9UKY1 873 aaPredicted RBP17.3■□□□□ 0.36
USP28-204ENST00000537642 IFIT3O14879 490 aaKnown RBP17.29■□□□□ 0.36
USP28-204ENST00000537642 ANTXR2P58335 489 aa17.29■□□□□ 0.36
USP28-204ENST00000537642 ACVR2BQ13705 512 aa17.29■□□□□ 0.36
USP28-204ENST00000537642 BAATQ14032 418 aaPredicted RBP17.29■□□□□ 0.36
USP28-204ENST00000537642 MB21D2Q8IYB1 491 aaPredicted RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms