RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 PAX7P23759 505 aa17.41■□□□□ 0.38
CHFR-213ENST00000536843 CDR1P51861 262 aa17.41■□□□□ 0.38
CHFR-213ENST00000536843 ITPK1Q13572 414 aa17.41■□□□□ 0.38
CHFR-213ENST00000536843 TSEN2Q8NCE0 465 aaKnown RBP17.41■□□□□ 0.38
CHFR-213ENST00000536843 AIDAQ96BJ3 306 aa17.41■□□□□ 0.38
CHFR-213ENST00000536843 ACTR5Q9H9F9 607 aaPredicted RBP17.41■□□□□ 0.38
CHFR-213ENST00000536843 INCENPQ9NQS7 918 aa17.41■□□□□ 0.38
CHFR-213ENST00000536843 SRPRBQ9Y5M8 271 aaKnown RBP17.41■□□□□ 0.38
CHFR-213ENST00000536843 TNFRSF8P28908 595 aa17.4■□□□□ 0.38
CHFR-213ENST00000536843 SPAG1Q07617 926 aa17.4■□□□□ 0.38
CHFR-213ENST00000536843 RASGRF1Q13972 1273 aa17.4■□□□□ 0.38
CHFR-213ENST00000536843 SNCBQ16143 134 aa17.4■□□□□ 0.38
CHFR-213ENST00000536843 C6orf89Q6UWU4 347 aa17.4■□□□□ 0.38
CHFR-213ENST00000536843 SH3RF1Q7Z6J0 888 aa17.4■□□□□ 0.38
CHFR-213ENST00000536843 MARCH10Q8NA82 808 aaPredicted RBP17.4■□□□□ 0.38
CHFR-213ENST00000536843 PHKBQ93100 1093 aa17.4■□□□□ 0.38
CHFR-213ENST00000536843 SENP2Q9HC62 589 aa17.4■□□□□ 0.38
CHFR-213ENST00000536843 DDX20Q9UHI6 824 aaKnown RBP17.4■□□□□ 0.38
CHFR-213ENST00000536843 ANGEL1Q9UNK9 670 aaKnown RBP17.4■□□□□ 0.38
CHFR-213ENST00000536843 DOT1LQ8TEK3 1739 aa17.4■□□□□ 0.38
CHFR-213ENST00000536843 LOC102724428A0A0B4J2F2 783 aa17.4■□□□□ 0.38
CHFR-213ENST00000536843 B4E1Z4 1266 aa17.4■□□□□ 0.38
CHFR-213ENST00000536843 KRT86O43790 486 aa17.4■□□□□ 0.38
CHFR-213ENST00000536843 NEBLO76041 1014 aa17.4■□□□□ 0.38
CHFR-213ENST00000536843 COPB1P53618 953 aaKnown RBP17.4■□□□□ 0.38
CHFR-213ENST00000536843 SIK1P57059 783 aa17.4■□□□□ 0.38
CHFR-213ENST00000536843 KRT83P78385 493 aa17.4■□□□□ 0.38
CHFR-213ENST00000536843 APBA1Q02410 837 aa17.4■□□□□ 0.38
CHFR-213ENST00000536843 NNTQ13423 1086 aa17.4■□□□□ 0.38
CHFR-213ENST00000536843 PTGISQ16647 500 aa17.4■□□□□ 0.38
CHFR-213ENST00000536843 MAGEB6Q8N7X4 407 aa17.4■□□□□ 0.38
CHFR-213ENST00000536843 GSDMAQ96QA5 445 aa17.4■□□□□ 0.38
CHFR-213ENST00000536843 TRIM6Q9C030 488 aaPredicted RBP17.4■□□□□ 0.38
CHFR-213ENST00000536843 STK36Q9NRP7 1315 aa17.39■□□□□ 0.38
CHFR-213ENST00000536843 A0A1B0GUA9 196 aa17.39■□□□□ 0.37
CHFR-213ENST00000536843 ZNF185O15231 689 aa17.39■□□□□ 0.37
CHFR-213ENST00000536843 PPP1R37O75864 691 aa17.39■□□□□ 0.37
CHFR-213ENST00000536843 CLSTN1O94985 981 aa17.39■□□□□ 0.37
CHFR-213ENST00000536843 NTRK3Q16288 839 aa17.39■□□□□ 0.37
CHFR-213ENST00000536843 RNF187Q5TA31 235 aaPredicted RBP17.39■□□□□ 0.37
CHFR-213ENST00000536843 TLDC1Q6P9B6 456 aa17.39■□□□□ 0.37
CHFR-213ENST00000536843 OR8K1Q8NGG5 319 aa17.39■□□□□ 0.37
CHFR-213ENST00000536843 DNAJC7Q99615 494 aa17.39■□□□□ 0.37
CHFR-213ENST00000536843 LRP5O75197 1615 aa17.39■□□□□ 0.37
CHFR-213ENST00000536843 RXRAP19793 462 aa17.39■□□□□ 0.37
CHFR-213ENST00000536843 IARSP41252 1262 aaKnown RBP17.39■□□□□ 0.37
CHFR-213ENST00000536843 RILPL1Q5EBL4 403 aa17.39■□□□□ 0.37
CHFR-213ENST00000536843 PARP9Q8IXQ6 854 aa17.39■□□□□ 0.37
CHFR-213ENST00000536843 MYCBPAPQ8TBZ2 947 aa17.39■□□□□ 0.37
CHFR-213ENST00000536843 SGSM3Q96HU1 749 aa17.39■□□□□ 0.37
CHFR-213ENST00000536843 RNPC3Q96LT9 517 aaKnown RBP17.39■□□□□ 0.37
CHFR-213ENST00000536843 PURBQ96QR8 312 aaKnown RBP17.39■□□□□ 0.37
CHFR-213ENST00000536843 ATP6V0A4Q9HBG4 840 aa17.39■□□□□ 0.37
CHFR-213ENST00000536843 DMGDHQ9UI17 866 aaKnown RBP17.39■□□□□ 0.37
CHFR-213ENST00000536843 MBD4O95243 580 aa17.38■□□□□ 0.37
CHFR-213ENST00000536843 BCAMP50895 628 aa17.38■□□□□ 0.37
CHFR-213ENST00000536843 ATP2B2Q01814 1243 aa17.38■□□□□ 0.37
CHFR-213ENST00000536843 APOA5Q6Q788 366 aa17.38■□□□□ 0.37
CHFR-213ENST00000536843 ARMT1Q9H993 441 aa17.38■□□□□ 0.37
CHFR-213ENST00000536843 EPB41L4AQ9HCS5 686 aaPredicted RBP17.38■□□□□ 0.37
CHFR-213ENST00000536843 NIP7Q9Y221 180 aaKnown RBP eCLIP17.38■□□□□ 0.37
CHFR-213ENST00000536843 GOLGA6L7A0A1B0GV03 622 aa17.38■□□□□ 0.37
CHFR-213ENST00000536843 PATL2C9JE40 543 aaKnown RBP17.38■□□□□ 0.37
CHFR-213ENST00000536843 RANBP6O60518 1105 aaKnown RBP17.38■□□□□ 0.37
CHFR-213ENST00000536843 FAM107AO95990 144 aa17.38■□□□□ 0.37
CHFR-213ENST00000536843 EZRP15311 586 aaKnown RBP17.38■□□□□ 0.37
CHFR-213ENST00000536843 ATP1A2P50993 1020 aa17.38■□□□□ 0.37
CHFR-213ENST00000536843 MAP3K12Q12852 859 aa17.38■□□□□ 0.37
CHFR-213ENST00000536843 DPYDQ12882 1025 aa17.38■□□□□ 0.37
CHFR-213ENST00000536843 ALX1Q15699 326 aa17.38■□□□□ 0.37
CHFR-213ENST00000536843 NLRP14Q86W24 1093 aa17.38■□□□□ 0.37
CHFR-213ENST00000536843 IFNL3Q8IZI9 196 aa17.38■□□□□ 0.37
CHFR-213ENST00000536843 HDAC7Q8WUI4 952 aa17.38■□□□□ 0.37
CHFR-213ENST00000536843 ZIM3Q96PE6 472 aa17.38■□□□□ 0.37
CHFR-213ENST00000536843 CCT8L2Q96SF2 557 aa17.38■□□□□ 0.37
CHFR-213ENST00000536843 LRRC1Q9BTT6 524 aa17.38■□□□□ 0.37
CHFR-213ENST00000536843 USP21Q9UK80 565 aa17.38■□□□□ 0.37
CHFR-213ENST00000536843 CTDSPL2Q05D32 466 aa17.37■□□□□ 0.37
CHFR-213ENST00000536843 EZH2Q15910 746 aaKnown RBP17.37■□□□□ 0.37
CHFR-213ENST00000536843 CCDC152Q4G0S7 254 aa17.37■□□□□ 0.37
CHFR-213ENST00000536843 PARP10Q53GL7 1025 aa17.37■□□□□ 0.37
CHFR-213ENST00000536843 MEX3CQ5U5Q3 659 aaKnown RBP17.37■□□□□ 0.37
CHFR-213ENST00000536843 CYB5D1Q6P9G0 228 aa17.37■□□□□ 0.37
CHFR-213ENST00000536843 USP49Q70CQ1 688 aa17.37■□□□□ 0.37
CHFR-213ENST00000536843 FAM228AQ86W67 206 aa17.37■□□□□ 0.37
CHFR-213ENST00000536843 CREG2Q8IUH2 290 aa17.37■□□□□ 0.37
CHFR-213ENST00000536843 SH2D3CQ8N5H7 860 aa17.37■□□□□ 0.37
CHFR-213ENST00000536843 C1orf131Q8NDD1 294 aaKnown RBP17.37■□□□□ 0.37
CHFR-213ENST00000536843 VPS16Q9H269 839 aa17.37■□□□□ 0.37
CHFR-213ENST00000536843 TACC3Q9Y6A5 838 aa17.37■□□□□ 0.37
CHFR-213ENST00000536843 NTSR2O95665 410 aa17.37■□□□□ 0.37
CHFR-213ENST00000536843 KIAA1328Q86T90 577 aa17.37■□□□□ 0.37
CHFR-213ENST00000536843 FUKQ8N0W3 1084 aa17.37■□□□□ 0.37
CHFR-213ENST00000536843 IGDCC4Q8TDY8 1250 aa17.37■□□□□ 0.37
CHFR-213ENST00000536843 PAGE5Q96GU1 130 aa17.37■□□□□ 0.37
CHFR-213ENST00000536843 CSRNP2Q9H175 543 aa17.37■□□□□ 0.37
CHFR-213ENST00000536843 CENPHQ9H3R5 247 aa17.37■□□□□ 0.37
CHFR-213ENST00000536843 IQSEC3Q9UPP2 1182 aaPredicted RBP17.37■□□□□ 0.37
CHFR-213ENST00000536843 CTNND2Q9UQB3 1225 aa17.37■□□□□ 0.37
CHFR-213ENST00000536843 MMP1P03956 469 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms