RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 GFOD1Q9NXC2 390 aa8.53□□□□□ -1.04
CLIP1-207ENST00000536634 ZNF214Q9UL59 606 aaPredicted RBP8.53□□□□□ -1.04
CLIP1-207ENST00000536634 PCDHB12Q9Y5F1 795 aa8.53□□□□□ -1.04
CLIP1-207ENST00000536634 LTBP4Q8N2S1 1624 aa8.52□□□□□ -1.05
CLIP1-207ENST00000536634 SIGLEC6O43699 453 aa8.52□□□□□ -1.05
CLIP1-207ENST00000536634 TP53P04637 393 aaPredicted RBP8.52□□□□□ -1.05
CLIP1-207ENST00000536634 JUNBP17275 347 aaPredicted RBP8.52□□□□□ -1.05
CLIP1-207ENST00000536634 TEKQ02763 1124 aa8.52□□□□□ -1.05
CLIP1-207ENST00000536634 USHBP1Q8N6Y0 703 aa8.52□□□□□ -1.05
CLIP1-207ENST00000536634 C19orf47Q8N9M1 422 aaKnown RBP8.52□□□□□ -1.05
CLIP1-207ENST00000536634 DAGLBQ8NCG7 672 aa8.52□□□□□ -1.05
CLIP1-207ENST00000536634 ANAPC16Q96DE5 110 aa8.52□□□□□ -1.05
CLIP1-207ENST00000536634 TCTN2Q96GX1 697 aa8.52□□□□□ -1.05
CLIP1-207ENST00000536634 FBXL21Q9UKT6 434 aa8.52□□□□□ -1.05
CLIP1-207ENST00000536634 STRIP2Q9ULQ0 834 aa8.52□□□□□ -1.05
CLIP1-207ENST00000536634 PCDHB10Q9UN67 800 aa8.52□□□□□ -1.05
CLIP1-207ENST00000536634 MAGI2Q86UL8 1455 aa8.51□□□□□ -1.05
CLIP1-207ENST00000536634 MEIS1O00470 390 aa8.51□□□□□ -1.05
CLIP1-207ENST00000536634 GDNFP39905 211 aa8.51□□□□□ -1.05
CLIP1-207ENST00000536634 HK2P52789 917 aa8.51□□□□□ -1.05
CLIP1-207ENST00000536634 FYB2Q5VWT5 728 aa8.51□□□□□ -1.05
CLIP1-207ENST00000536634 C7orf61Q8IZ16 206 aa8.51□□□□□ -1.05
CLIP1-207ENST00000536634 CHST7Q9NS84 486 aa8.51□□□□□ -1.05
CLIP1-207ENST00000536634 TMEM59LQ9UK28 342 aa8.51□□□□□ -1.05
CLIP1-207ENST00000536634 YBX3P16989 372 aaKnown RBP eCLIP8.5□□□□□ -1.05
CLIP1-207ENST00000536634 CTSKP43235 329 aa8.5□□□□□ -1.05
CLIP1-207ENST00000536634 ERVFC1P60507 584 aa8.5□□□□□ -1.05
CLIP1-207ENST00000536634 PPP2R5EQ16537 467 aa8.5□□□□□ -1.05
CLIP1-207ENST00000536634 ZNF655Q8N720 491 aaPredicted RBP8.5□□□□□ -1.05
CLIP1-207ENST00000536634 FOXP3Q9BZS1 431 aa8.5□□□□□ -1.05
CLIP1-207ENST00000536634 MRVI1Q9Y6F6 885 aa8.5□□□□□ -1.05
CLIP1-207ENST00000536634 UHRF1BP1Q6BDS2 1440 aa8.49□□□□□ -1.05
CLIP1-207ENST00000536634 BIN1O00499 593 aa8.49□□□□□ -1.05
CLIP1-207ENST00000536634 ZGLP1P0C6A0 271 aa8.49□□□□□ -1.05
CLIP1-207ENST00000536634 TXKP42681 527 aa8.49□□□□□ -1.05
CLIP1-207ENST00000536634 BBS9Q3SYG4 887 aa8.49□□□□□ -1.05
CLIP1-207ENST00000536634 VPS37DQ86XT2 251 aa8.49□□□□□ -1.05
CLIP1-207ENST00000536634 SMARCC1Q92922 1105 aaPredicted RBP8.49□□□□□ -1.05
CLIP1-207ENST00000536634 EBF1Q9UH73 591 aa8.49□□□□□ -1.05
CLIP1-207ENST00000536634 ZNF451Q9Y4E5 1061 aa8.49□□□□□ -1.05
CLIP1-207ENST00000536634 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.49□□□□□ -1.05
CLIP1-207ENST00000536634 SETD1BQ9UPS6 1966 aaKnown RBP8.48□□□□□ -1.05
CLIP1-207ENST00000536634 PTPRTO14522 1441 aa8.48□□□□□ -1.05
CLIP1-207ENST00000536634 C9orf84Q5VXU9 1444 aa8.48□□□□□ -1.05
CLIP1-207ENST00000536634 CBFA2T2O43439 604 aa8.48□□□□□ -1.05
CLIP1-207ENST00000536634 SYPP08247 313 aa8.48□□□□□ -1.05
CLIP1-207ENST00000536634 FGRP09769 529 aa8.48□□□□□ -1.05
CLIP1-207ENST00000536634 CASP7P55210 303 aa8.48□□□□□ -1.05
CLIP1-207ENST00000536634 GNL2Q13823 731 aaKnown RBP8.48□□□□□ -1.05
CLIP1-207ENST00000536634 RNF111Q6ZNA4 994 aa8.48□□□□□ -1.05
CLIP1-207ENST00000536634 KLHL6Q8WZ60 621 aa8.48□□□□□ -1.05
CLIP1-207ENST00000536634 FAM168AQ92567 244 aa8.48□□□□□ -1.05
CLIP1-207ENST00000536634 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.48□□□□□ -1.05
CLIP1-207ENST00000536634 PHAXQ9H814 394 aaKnown RBP8.48□□□□□ -1.05
CLIP1-207ENST00000536634 GP6Q9HCN6 339 aa8.48□□□□□ -1.05
CLIP1-207ENST00000536634 TCFL5Q9UL49 500 aa8.48□□□□□ -1.05
CLIP1-207ENST00000536634 ZNF281Q9Y2X9 895 aa8.48□□□□□ -1.05
CLIP1-207ENST00000536634 ATP10AO60312 1499 aa8.48□□□□□ -1.05
CLIP1-207ENST00000536634 SCAPERQ9BY12 1400 aa8.47□□□□□ -1.05
CLIP1-207ENST00000536634 C3P01024 1663 aa8.47□□□□□ -1.05
CLIP1-207ENST00000536634 TMEM82A0PJX8 343 aa8.47□□□□□ -1.05
CLIP1-207ENST00000536634 FKTNO75072 461 aa8.47□□□□□ -1.05
CLIP1-207ENST00000536634 SSBP05455 408 aaKnown RBP eCLIP8.47□□□□□ -1.05
CLIP1-207ENST00000536634 GNPTABQ3T906 1256 aa8.47□□□□□ -1.05
CLIP1-207ENST00000536634 ANKRD39Q53RE8 183 aa8.47□□□□□ -1.05
CLIP1-207ENST00000536634 CRTC3Q6UUV7 619 aa8.47□□□□□ -1.05
CLIP1-207ENST00000536634 ZPBP2Q6X784 338 aa8.47□□□□□ -1.05
CLIP1-207ENST00000536634 LINC00116Q8NCU8 138 aa8.47□□□□□ -1.05
CLIP1-207ENST00000536634 G6PC3Q9BUM1 346 aa8.47□□□□□ -1.05
CLIP1-207ENST00000536634 SP110Q9HB58 689 aa8.47□□□□□ -1.05
CLIP1-207ENST00000536634 SLC12A7Q9Y666 1083 aa8.47□□□□□ -1.05
CLIP1-207ENST00000536634 IQSEC2Q5JU85 1478 aa8.46□□□□□ -1.05
CLIP1-207ENST00000536634 PLEKHD1A6NEE1 506 aa8.46□□□□□ -1.06
CLIP1-207ENST00000536634 PAX4O43316 350 aa8.46□□□□□ -1.06
CLIP1-207ENST00000536634 CD247P20963 164 aa8.46□□□□□ -1.06
CLIP1-207ENST00000536634 DNAJA1P31689 397 aaKnown RBP8.46□□□□□ -1.06
CLIP1-207ENST00000536634 TRHRP34981 398 aaPredicted RBP8.46□□□□□ -1.06
CLIP1-207ENST00000536634 AFMP43652 599 aa8.46□□□□□ -1.06
CLIP1-207ENST00000536634 PCBP3P57721 371 aaKnown RBP8.46□□□□□ -1.06
CLIP1-207ENST00000536634 ZNF445P59923 1031 aa8.46□□□□□ -1.06
CLIP1-207ENST00000536634 ARID5AQ03989 594 aa8.46□□□□□ -1.06
CLIP1-207ENST00000536634 ZSWIM9Q86XI8 627 aa8.46□□□□□ -1.06
CLIP1-207ENST00000536634 MCF2L2Q86YR7 1114 aa8.46□□□□□ -1.06
CLIP1-207ENST00000536634 BRF1Q92994 677 aa8.46□□□□□ -1.06
CLIP1-207ENST00000536634 ASIC4Q96FT7 647 aa8.46□□□□□ -1.06
CLIP1-207ENST00000536634 CCDC120Q96HB5 630 aa8.46□□□□□ -1.06
CLIP1-207ENST00000536634 HAUS7Q99871 368 aa8.46□□□□□ -1.06
CLIP1-207ENST00000536634 PRR13Q9NZ81 148 aa8.46□□□□□ -1.06
CLIP1-207ENST00000536634 RNF114Q9Y508 228 aa8.46□□□□□ -1.06
CLIP1-207ENST00000536634 CDK13Q14004 1512 aaKnown RBP8.45□□□□□ -1.06
CLIP1-207ENST00000536634 SMAD7O15105 426 aaKnown RBP8.45□□□□□ -1.06
CLIP1-207ENST00000536634 HPXP02790 462 aa8.45□□□□□ -1.06
CLIP1-207ENST00000536634 RPL10P27635 214 aaKnown RBP8.45□□□□□ -1.06
CLIP1-207ENST00000536634 ETFBP38117 255 aa8.45□□□□□ -1.06
CLIP1-207ENST00000536634 SLC7A5Q01650 507 aa8.45□□□□□ -1.06
CLIP1-207ENST00000536634 WAPLQ7Z5K2 1190 aa8.45□□□□□ -1.06
CLIP1-207ENST00000536634 FAM9AQ8IZU1 332 aaPredicted RBP8.45□□□□□ -1.06
CLIP1-207ENST00000536634 KIRREL1Q96J84 757 aa8.45□□□□□ -1.06
CLIP1-207ENST00000536634 DSCC1Q9BVC3 393 aa8.45□□□□□ -1.06
CLIP1-207ENST00000536634 PLCH2O75038 1416 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms