RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 KARSQ15046 597 aaKnown RBP9.3□□□□□ -0.92
ABCA4-207ENST00000536513 UVSSAQ2YD98 709 aa9.3□□□□□ -0.92
ABCA4-207ENST00000536513 TYW1BQ6NUM6 668 aa9.3□□□□□ -0.92
ABCA4-207ENST00000536513 MOB2Q70IA6 237 aa9.3□□□□□ -0.92
ABCA4-207ENST00000536513 BRAPQ7Z569 592 aa9.3□□□□□ -0.92
ABCA4-207ENST00000536513 CEP57L1Q8IYX8 460 aa9.3□□□□□ -0.92
ABCA4-207ENST00000536513 KRI1Q8N9T8 703 aaKnown RBP9.3□□□□□ -0.92
ABCA4-207ENST00000536513 CPLX3Q8WVH0 158 aa9.3□□□□□ -0.92
ABCA4-207ENST00000536513 SH2D3AQ9BRG2 576 aa9.3□□□□□ -0.92
ABCA4-207ENST00000536513 PAGR1Q9BTK6 254 aa9.3□□□□□ -0.92
ABCA4-207ENST00000536513 MYH2Q9UKX2 1941 aa9.3□□□□□ -0.92
ABCA4-207ENST00000536513 FLOT1O75955 427 aa9.3□□□□□ -0.92
ABCA4-207ENST00000536513 IBSPP21815 317 aaPredicted RBP9.3□□□□□ -0.92
ABCA4-207ENST00000536513 CACNB1Q02641 598 aaPredicted RBP9.3□□□□□ -0.92
ABCA4-207ENST00000536513 CEP135Q66GS9 1140 aa9.3□□□□□ -0.92
ABCA4-207ENST00000536513 C6orf50Q9HD87 102 aa9.3□□□□□ -0.92
ABCA4-207ENST00000536513 TBC1D7Q9P0N9 293 aa9.3□□□□□ -0.92
ABCA4-207ENST00000536513 BRWD3Q6RI45 1802 aa9.29□□□□□ -0.92
ABCA4-207ENST00000536513 CYTH3O43739 400 aa9.29□□□□□ -0.92
ABCA4-207ENST00000536513 SERPINC1P01008 464 aa9.29□□□□□ -0.92
ABCA4-207ENST00000536513 GNAQP50148 359 aa9.29□□□□□ -0.92
ABCA4-207ENST00000536513 TPM4P67936 248 aa9.29□□□□□ -0.92
ABCA4-207ENST00000536513 TMCO3Q6UWJ1 677 aa9.29□□□□□ -0.92
ABCA4-207ENST00000536513 DYMQ7RTS9 669 aa9.29□□□□□ -0.92
ABCA4-207ENST00000536513 ADGRF4Q8IZF3 695 aa9.29□□□□□ -0.92
ABCA4-207ENST00000536513 REXO1Q8N1G1 1221 aaKnown RBP9.29□□□□□ -0.92
ABCA4-207ENST00000536513 KIF18AQ8NI77 898 aa9.29□□□□□ -0.92
ABCA4-207ENST00000536513 DEFB129Q9H1M3 183 aa9.29□□□□□ -0.92
ABCA4-207ENST00000536513 HACL1Q9UJ83 578 aa9.29□□□□□ -0.92
ABCA4-207ENST00000536513 MYCLP12524 364 aaPredicted RBP9.29□□□□□ -0.92
ABCA4-207ENST00000536513 SHMT1P34896 483 aa9.29□□□□□ -0.92
ABCA4-207ENST00000536513 CYP4A11Q02928 519 aa9.29□□□□□ -0.92
ABCA4-207ENST00000536513 TNIP1Q15025 636 aa9.29□□□□□ -0.92
ABCA4-207ENST00000536513 LEKR1Q6ZMV7 388 aa9.29□□□□□ -0.92
ABCA4-207ENST00000536513 C16orf86Q6ZW13 317 aa9.29□□□□□ -0.92
ABCA4-207ENST00000536513 NEDD1Q8NHV4 660 aa9.29□□□□□ -0.92
ABCA4-207ENST00000536513 TBCKQ8TEA7 893 aa9.29□□□□□ -0.92
ABCA4-207ENST00000536513 RNF26Q9BY78 433 aaPredicted RBP9.29□□□□□ -0.92
ABCA4-207ENST00000536513 ZHX2Q9Y6X8 837 aa9.29□□□□□ -0.92
ABCA4-207ENST00000536513 SPDYE2BA6NHP3 402 aa9.29□□□□□ -0.92
ABCA4-207ENST00000536513 SPDYE6P0CI01 402 aa9.29□□□□□ -0.92
ABCA4-207ENST00000536513 CALML3P27482 149 aa9.29□□□□□ -0.92
ABCA4-207ENST00000536513 TXLNAP40222 546 aa9.29□□□□□ -0.92
ABCA4-207ENST00000536513 PPP4CP60510 307 aa9.29□□□□□ -0.92
ABCA4-207ENST00000536513 FAM160A1Q05DH4 1040 aa9.29□□□□□ -0.92
ABCA4-207ENST00000536513 KIF4BQ2VIQ3 1234 aa9.29□□□□□ -0.92
ABCA4-207ENST00000536513 LONRF3Q496Y0 759 aa9.29□□□□□ -0.92
ABCA4-207ENST00000536513 DGKHQ86XP1 1220 aa9.29□□□□□ -0.92
ABCA4-207ENST00000536513 PSTPIP2Q9H939 334 aa9.29□□□□□ -0.92
ABCA4-207ENST00000536513 DDX19AQ9NUU7 478 aaKnown RBP9.29□□□□□ -0.92
ABCA4-207ENST00000536513 NFKBIEO00221 500 aa9.28□□□□□ -0.92
ABCA4-207ENST00000536513 ORC4O43929 436 aa9.28□□□□□ -0.92
ABCA4-207ENST00000536513 CCDC178Q5BJE1 867 aa9.28□□□□□ -0.92
ABCA4-207ENST00000536513 RILPL1Q5EBL4 403 aa9.28□□□□□ -0.92
ABCA4-207ENST00000536513 SH3BP5LQ7L8J4 393 aa9.28□□□□□ -0.92
ABCA4-207ENST00000536513 EEPD1Q7L9B9 569 aa9.28□□□□□ -0.92
ABCA4-207ENST00000536513 SLC16A10Q8TF71 515 aa9.28□□□□□ -0.92
ABCA4-207ENST00000536513 PCMTD1Q96MG8 357 aaPredicted RBP9.28□□□□□ -0.92
ABCA4-207ENST00000536513 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.28□□□□□ -0.92
ABCA4-207ENST00000536513 NUP188Q5SRE5 1749 aa9.28□□□□□ -0.92
ABCA4-207ENST00000536513 DDAH1O94760 285 aa9.28□□□□□ -0.92
ABCA4-207ENST00000536513 PDHBP11177 359 aa9.28□□□□□ -0.92
ABCA4-207ENST00000536513 GTF2A1P52655 376 aaPredicted RBP9.28□□□□□ -0.92
ABCA4-207ENST00000536513 JAG1P78504 1218 aa9.28□□□□□ -0.92
ABCA4-207ENST00000536513 PRR16Q569H4 304 aa9.28□□□□□ -0.92
ABCA4-207ENST00000536513 SYMPKQ92797 1274 aaKnown RBP9.28□□□□□ -0.92
ABCA4-207ENST00000536513 KANSL2Q9H9L4 492 aa9.28□□□□□ -0.92
ABCA4-207ENST00000536513 PICK1Q9NRD5 415 aa9.28□□□□□ -0.92
ABCA4-207ENST00000536513 MYH3P11055 1940 aa9.28□□□□□ -0.92
ABCA4-207ENST00000536513 SPDYE3A6NKU9 549 aa9.28□□□□□ -0.92
ABCA4-207ENST00000536513 NDUFB10O96000 172 aa9.28□□□□□ -0.92
ABCA4-207ENST00000536513 FMR1Q06787 632 aaKnown RBP eCLIP9.28□□□□□ -0.92
ABCA4-207ENST00000536513 IRF5Q13568 498 aa9.28□□□□□ -0.92
ABCA4-207ENST00000536513 CDC37Q16543 378 aaPredicted RBP9.28□□□□□ -0.92
ABCA4-207ENST00000536513 HHIPL2Q6UWX4 724 aa9.28□□□□□ -0.92
ABCA4-207ENST00000536513 C11orf57Q6ZUT1 292 aaPredicted RBP9.28□□□□□ -0.92
ABCA4-207ENST00000536513 TBC1D5Q92609 795 aa9.28□□□□□ -0.92
ABCA4-207ENST00000536513 ZDHHC15Q96MV8 337 aa9.28□□□□□ -0.92
ABCA4-207ENST00000536513 TSPYL1Q9H0U9 437 aa9.28□□□□□ -0.92
ABCA4-207ENST00000536513 ARHGEF10LQ9HCE6 1279 aa9.28□□□□□ -0.92
ABCA4-207ENST00000536513 MAD2L2Q9UI95 211 aa9.28□□□□□ -0.92
ABCA4-207ENST00000536513 PYCARDQ9ULZ3 195 aa9.28□□□□□ -0.92
ABCA4-207ENST00000536513 FAM205AQ6ZU69 1335 aa9.27□□□□□ -0.92
ABCA4-207ENST00000536513 KCNA3P22001 575 aa9.27□□□□□ -0.93
ABCA4-207ENST00000536513 STAT6P42226 847 aa9.27□□□□□ -0.93
ABCA4-207ENST00000536513 ADCY7P51828 1080 aa9.27□□□□□ -0.93
ABCA4-207ENST00000536513 BMS1Q14692 1282 aaKnown RBP9.27□□□□□ -0.93
ABCA4-207ENST00000536513 NAA30Q147X3 362 aaPredicted RBP9.27□□□□□ -0.93
ABCA4-207ENST00000536513 PKN1Q16512 942 aa9.27□□□□□ -0.93
ABCA4-207ENST00000536513 DPCR1Q3MIW9 517 aa9.27□□□□□ -0.93
ABCA4-207ENST00000536513 SBK1Q52WX2 424 aa9.27□□□□□ -0.93
ABCA4-207ENST00000536513 DTHD1Q6ZMT9 781 aa9.27□□□□□ -0.93
ABCA4-207ENST00000536513 CCDC148Q8NFR7 591 aa9.27□□□□□ -0.93
ABCA4-207ENST00000536513 AGXT2Q9BYV1 514 aa9.27□□□□□ -0.93
ABCA4-207ENST00000536513 CEP131Q9UPN4 1083 aa9.27□□□□□ -0.93
ABCA4-207ENST00000536513 CICQ96RK0 1608 aaPredicted RBP9.27□□□□□ -0.93
ABCA4-207ENST00000536513 MEIS1O00470 390 aa9.27□□□□□ -0.93
ABCA4-207ENST00000536513 TDP2O95551 362 aa9.27□□□□□ -0.93
ABCA4-207ENST00000536513 LMAN1P49257 510 aa9.27□□□□□ -0.93
ABCA4-207ENST00000536513 HMGCS2P54868 508 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms