RNA–Protein interactions for RNA: ENST00000536187.6

CACNB3-202, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2 BASIC

Gene CACNB3, Length 1,872 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-202ENST00000536187 PTPN18Q99952 460 aa20.64■□□□□ 0.9
CACNB3-202ENST00000536187 SPDYE16A6NNV3 312 aaPredicted RBP20.64■□□□□ 0.89
CACNB3-202ENST00000536187 FAM155AB1AL88 458 aaPredicted RBP20.64■□□□□ 0.89
CACNB3-202ENST00000536187 MMP1P03956 469 aa20.64■□□□□ 0.89
CACNB3-202ENST00000536187 FSTL1Q12841 308 aa20.64■□□□□ 0.89
CACNB3-202ENST00000536187 RESTQ13127 1097 aa20.64■□□□□ 0.89
CACNB3-202ENST00000536187 PRPF38AQ8NAV1 312 aaKnown RBP20.64■□□□□ 0.89
CACNB3-202ENST00000536187 WASF1Q92558 559 aa20.64■□□□□ 0.89
CACNB3-202ENST00000536187 TNPO1Q92973 898 aaKnown RBP20.64■□□□□ 0.89
CACNB3-202ENST00000536187 AGBL1Q96MI9 1066 aa20.64■□□□□ 0.89
CACNB3-202ENST00000536187 ANP32EQ9BTT0 268 aa20.64■□□□□ 0.89
CACNB3-202ENST00000536187 A0A0G2JMZ2 1700 aa20.63■□□□□ 0.89
CACNB3-202ENST00000536187 WDR33Q9C0J8 1336 aaKnown RBP20.63■□□□□ 0.89
CACNB3-202ENST00000536187 FAM205CA6NFA0 338 aa20.63■□□□□ 0.89
CACNB3-202ENST00000536187 BTBD18B2RXH4 712 aa20.63■□□□□ 0.89
CACNB3-202ENST00000536187 USP17L15C9J2P7 530 aa20.63■□□□□ 0.89
CACNB3-202ENST00000536187 USP17L13C9JLJ4 530 aa20.63■□□□□ 0.89
CACNB3-202ENST00000536187 USP17L11C9JVI0 530 aa20.63■□□□□ 0.89
CACNB3-202ENST00000536187 USP17L18D6R9N7 530 aa20.63■□□□□ 0.89
CACNB3-202ENST00000536187 USP17L22D6RA61 530 aa20.63■□□□□ 0.89
CACNB3-202ENST00000536187 USP17L17D6RBQ6 530 aa20.63■□□□□ 0.89
CACNB3-202ENST00000536187 USP17L19D6RCP7 530 aa20.63■□□□□ 0.89
CACNB3-202ENST00000536187 USP17L20D6RJB6 530 aa20.63■□□□□ 0.89
CACNB3-202ENST00000536187 F13A1P00488 732 aa20.63■□□□□ 0.89
CACNB3-202ENST00000536187 DSG3P32926 999 aa20.63■□□□□ 0.89
CACNB3-202ENST00000536187 KIF23Q02241 960 aaPredicted RBP20.63■□□□□ 0.89
CACNB3-202ENST00000536187 USP17L24Q0WX57 530 aa20.63■□□□□ 0.89
CACNB3-202ENST00000536187 EARS2Q5JPH6 523 aaKnown RBP20.63■□□□□ 0.89
CACNB3-202ENST00000536187 MCTP1Q6DN14 999 aa20.63■□□□□ 0.89
CACNB3-202ENST00000536187 REPS2Q8NFH8 660 aa20.63■□□□□ 0.89
CACNB3-202ENST00000536187 RASGRP4Q8TDF6 673 aa20.63■□□□□ 0.89
CACNB3-202ENST00000536187 SLC38A10Q9HBR0 1119 aa20.63■□□□□ 0.89
CACNB3-202ENST00000536187 AGTPBP1Q9UPW5 1226 aa20.63■□□□□ 0.89
CACNB3-202ENST00000536187 KIF3AQ9Y496 699 aa20.63■□□□□ 0.89
CACNB3-202ENST00000536187 CCL15-CCL14A0A0B4J2E2 113 aa20.62■□□□□ 0.89
CACNB3-202ENST00000536187 VWA5AO00534 786 aa20.62■□□□□ 0.89
CACNB3-202ENST00000536187 OPLAHO14841 1288 aa20.62■□□□□ 0.89
CACNB3-202ENST00000536187 NAPAP54920 295 aa20.62■□□□□ 0.89
CACNB3-202ENST00000536187 NUCB2P80303 420 aa20.62■□□□□ 0.89
CACNB3-202ENST00000536187 CCL15Q16663 113 aa20.62■□□□□ 0.89
CACNB3-202ENST00000536187 P2RX7Q99572 595 aaKnown RBP20.62■□□□□ 0.89
CACNB3-202ENST00000536187 ASCC2Q9H1I8 757 aaPredicted RBP20.62■□□□□ 0.89
CACNB3-202ENST00000536187 RAVER2Q9HCJ3 691 aaKnown RBP20.62■□□□□ 0.89
CACNB3-202ENST00000536187 RBM27Q9P2N5 1060 aaKnown RBP20.62■□□□□ 0.89
CACNB3-202ENST00000536187 BTBD19C9JJ37 291 aa20.62■□□□□ 0.89
CACNB3-202ENST00000536187 ZBTB48P10074 688 aaPredicted RBP20.62■□□□□ 0.89
CACNB3-202ENST00000536187 HTRA3P83110 453 aa20.62■□□□□ 0.89
CACNB3-202ENST00000536187 DIS3L2Q8IYB7 885 aaKnown RBP20.62■□□□□ 0.89
CACNB3-202ENST00000536187 CPXCR1Q8N123 301 aa20.62■□□□□ 0.89
CACNB3-202ENST00000536187 FAM43AQ8N2R8 423 aa20.62■□□□□ 0.89
CACNB3-202ENST00000536187 ADAMTS5Q9UNA0 930 aa20.62■□□□□ 0.89
CACNB3-202ENST00000536187 PCDHA1Q9Y5I3 950 aa20.62■□□□□ 0.89
CACNB3-202ENST00000536187 SLC10A3P09131 477 aa20.61■□□□□ 0.89
CACNB3-202ENST00000536187 CYP2C8P10632 490 aa20.61■□□□□ 0.89
CACNB3-202ENST00000536187 HOXA7P31268 230 aaPredicted RBP20.61■□□□□ 0.89
CACNB3-202ENST00000536187 COG2Q14746 738 aa20.61■□□□□ 0.89
CACNB3-202ENST00000536187 MYH15Q9Y2K3 1946 aa20.61■□□□□ 0.89
CACNB3-202ENST00000536187 GTF2A2P52657 109 aa20.6■□□□□ 0.89
CACNB3-202ENST00000536187 GRM1Q13255 1194 aa20.6■□□□□ 0.89
CACNB3-202ENST00000536187 TMEM132BQ14DG7 1078 aa20.6■□□□□ 0.89
CACNB3-202ENST00000536187 CYP4F22Q6NT55 531 aa20.6■□□□□ 0.89
CACNB3-202ENST00000536187 FBXO11Q86XK2 927 aa20.6■□□□□ 0.89
CACNB3-202ENST00000536187 R3HDMLQ9H3Y0 253 aa20.6■□□□□ 0.89
CACNB3-202ENST00000536187 RIPK3Q9Y572 518 aa20.6■□□□□ 0.89
CACNB3-202ENST00000536187 TCHHQ07283 1943 aa20.6■□□□□ 0.89
CACNB3-202ENST00000536187 NLRP5P59047 1200 aa20.6■□□□□ 0.89
CACNB3-202ENST00000536187 TRIM29Q14134 588 aa20.6■□□□□ 0.89
CACNB3-202ENST00000536187 TNFRSF25Q93038 417 aa20.6■□□□□ 0.89
CACNB3-202ENST00000536187 AMNQ9BXJ7 453 aa20.6■□□□□ 0.89
CACNB3-202ENST00000536187 BTBD7Q9P203 1132 aa20.6■□□□□ 0.89
CACNB3-202ENST00000536187 ZNF214Q9UL59 606 aaPredicted RBP20.6■□□□□ 0.89
CACNB3-202ENST00000536187 SMCO2A6NFE2 343 aa20.59■□□□□ 0.89
CACNB3-202ENST00000536187 FASTKD5Q7L8L6 764 aaKnown RBP20.59■□□□□ 0.89
CACNB3-202ENST00000536187 TBC1D5Q92609 795 aa20.59■□□□□ 0.89
CACNB3-202ENST00000536187 FTOQ9C0B1 505 aaKnown RBP eCLIP20.59■□□□□ 0.89
CACNB3-202ENST00000536187 ZMYND12Q9H0C1 365 aa20.59■□□□□ 0.89
CACNB3-202ENST00000536187 TXNRD2Q9NNW7 524 aa20.59■□□□□ 0.89
CACNB3-202ENST00000536187 SH3GLB2Q9NR46 395 aa20.59■□□□□ 0.89
CACNB3-202ENST00000536187 M0R2N6 131 aa20.58■□□□□ 0.89
CACNB3-202ENST00000536187 IGF2BP3O00425 579 aaKnown RBP eCLIP20.58■□□□□ 0.89
CACNB3-202ENST00000536187 CETPP11597 493 aa20.58■□□□□ 0.89
CACNB3-202ENST00000536187 UBE2SQ16763 222 aa20.58■□□□□ 0.89
CACNB3-202ENST00000536187 TMEM260Q9NX78 707 aa20.58■□□□□ 0.89
CACNB3-202ENST00000536187 PDHXO00330 501 aa20.58■□□□□ 0.88
CACNB3-202ENST00000536187 WNT7AO00755 349 aa20.58■□□□□ 0.88
CACNB3-202ENST00000536187 CNMDO75829 334 aa20.58■□□□□ 0.88
CACNB3-202ENST00000536187 ICAM1P05362 532 aa20.58■□□□□ 0.88
CACNB3-202ENST00000536187 PGBD1Q96JS3 809 aa20.58■□□□□ 0.88
CACNB3-202ENST00000536187 HOMER2Q9NSB8 354 aa20.58■□□□□ 0.88
CACNB3-202ENST00000536187 CCPG1Q9ULG6 757 aa20.58■□□□□ 0.88
CACNB3-202ENST00000536187 U2AF2P26368 475 aaKnown RBP eCLIP20.57■□□□□ 0.88
CACNB3-202ENST00000536187 HERVK_113P62684 666 aa20.57■□□□□ 0.88
CACNB3-202ENST00000536187 IRX3P78415 501 aaPredicted RBP20.57■□□□□ 0.88
CACNB3-202ENST00000536187 MUM1L1Q5H9M0 696 aa20.57■□□□□ 0.88
CACNB3-202ENST00000536187 PCDHA4Q9UN74 947 aa20.57■□□□□ 0.88
CACNB3-202ENST00000536187 NFIBO00712 420 aa20.56■□□□□ 0.88
CACNB3-202ENST00000536187 XBP1P17861 261 aa20.56■□□□□ 0.88
CACNB3-202ENST00000536187 KRT2P35908 639 aa20.56■□□□□ 0.88
CACNB3-202ENST00000536187 APLP1P51693 650 aa20.56■□□□□ 0.88
CACNB3-202ENST00000536187 NBR1Q14596 966 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms