RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 CYTH3O43739 400 aa18.77■□□□□ 0.6
VAMP1-205ENST00000535927 PLEKHA8P1O95397 391 aa18.77■□□□□ 0.6
VAMP1-205ENST00000535927 CTDNEP1O95476 244 aa18.77■□□□□ 0.6
VAMP1-205ENST00000535927 PFKFB3Q16875 520 aaPredicted RBP18.77■□□□□ 0.6
VAMP1-205ENST00000535927 TKFCQ3LXA3 575 aa18.77■□□□□ 0.6
VAMP1-205ENST00000535927 TREML2Q5T2D2 321 aa18.77■□□□□ 0.6
VAMP1-205ENST00000535927 TTBK2Q6IQ55 1244 aa18.77■□□□□ 0.6
VAMP1-205ENST00000535927 PAXIP1Q6ZW49 1069 aaPredicted RBP18.77■□□□□ 0.6
VAMP1-205ENST00000535927 IFNL1Q8IU54 200 aa18.77■□□□□ 0.6
VAMP1-205ENST00000535927 IPO9Q96P70 1041 aaKnown RBP18.77■□□□□ 0.6
VAMP1-205ENST00000535927 UBA5Q9GZZ9 404 aa18.77■□□□□ 0.6
VAMP1-205ENST00000535927 ORC3Q9UBD5 711 aaPredicted RBP18.77■□□□□ 0.6
VAMP1-205ENST00000535927 RABGAP1Q9Y3P9 1069 aa18.77■□□□□ 0.6
VAMP1-205ENST00000535927 RLFQ13129 1914 aa18.76■□□□□ 0.59
VAMP1-205ENST00000535927 PTPDC1A2A3K4 754 aa18.76■□□□□ 0.59
VAMP1-205ENST00000535927 VWA5AO00534 786 aa18.76■□□□□ 0.59
VAMP1-205ENST00000535927 KIF23Q02241 960 aaPredicted RBP18.76■□□□□ 0.59
VAMP1-205ENST00000535927 ST3GAL1Q11201 340 aa18.76■□□□□ 0.59
VAMP1-205ENST00000535927 GALNT17Q6IS24 598 aa18.76■□□□□ 0.59
VAMP1-205ENST00000535927 RAB11FIP4Q86YS3 637 aa18.76■□□□□ 0.59
VAMP1-205ENST00000535927 FAM184AQ8NB25 1140 aa18.76■□□□□ 0.59
VAMP1-205ENST00000535927 KIFC2Q96AC6 838 aa18.76■□□□□ 0.59
VAMP1-205ENST00000535927 BEGAINQ9BUH8 593 aa18.76■□□□□ 0.59
VAMP1-205ENST00000535927 AMNQ9BXJ7 453 aa18.76■□□□□ 0.59
VAMP1-205ENST00000535927 SLC26A6Q9BXS9 759 aa18.76■□□□□ 0.59
VAMP1-205ENST00000535927 SLC34A2O95436 690 aa18.75■□□□□ 0.59
VAMP1-205ENST00000535927 ICAM1P05362 532 aa18.75■□□□□ 0.59
VAMP1-205ENST00000535927 SCG2P13521 617 aa18.75■□□□□ 0.59
VAMP1-205ENST00000535927 SLC16A2P36021 539 aa18.75■□□□□ 0.59
VAMP1-205ENST00000535927 CYP4F22Q6NT55 531 aa18.75■□□□□ 0.59
VAMP1-205ENST00000535927 PPP1R18Q6NYC8 613 aa18.75■□□□□ 0.59
VAMP1-205ENST00000535927 P2RX7Q99572 595 aaKnown RBP18.75■□□□□ 0.59
VAMP1-205ENST00000535927 PTPN18Q99952 460 aa18.75■□□□□ 0.59
VAMP1-205ENST00000535927 SPDYE16A6NNV3 312 aaPredicted RBP18.74■□□□□ 0.59
VAMP1-205ENST00000535927 HERVK_113P62684 666 aa18.74■□□□□ 0.59
VAMP1-205ENST00000535927 MKRN3Q13064 507 aaKnown RBP18.74■□□□□ 0.59
VAMP1-205ENST00000535927 CDC37Q16543 378 aaPredicted RBP18.74■□□□□ 0.59
VAMP1-205ENST00000535927 MCTP2Q6DN12 878 aa18.74■□□□□ 0.59
VAMP1-205ENST00000535927 FBXO11Q86XK2 927 aa18.74■□□□□ 0.59
VAMP1-205ENST00000535927 CCDC82Q8N4S0 544 aa18.74■□□□□ 0.59
VAMP1-205ENST00000535927 CCDC148Q8NFR7 591 aa18.74■□□□□ 0.59
VAMP1-205ENST00000535927 CFHR5Q9BXR6 569 aa18.74■□□□□ 0.59
VAMP1-205ENST00000535927 ZFYVE28Q9HCC9 887 aa18.74■□□□□ 0.59
VAMP1-205ENST00000535927 VAT1LQ9HCJ6 419 aa18.74■□□□□ 0.59
VAMP1-205ENST00000535927 FBXO28Q9NVF7 368 aa18.74■□□□□ 0.59
VAMP1-205ENST00000535927 MAP3K20Q9NYL2 800 aaKnown RBP18.74■□□□□ 0.59
VAMP1-205ENST00000535927 SLC25A27O95847 323 aa18.73■□□□□ 0.59
VAMP1-205ENST00000535927 CCNA1P78396 465 aa18.73■□□□□ 0.59
VAMP1-205ENST00000535927 TRIM29Q14134 588 aa18.73■□□□□ 0.59
VAMP1-205ENST00000535927 SMCR8Q8TEV9 937 aaPredicted RBP18.73■□□□□ 0.59
VAMP1-205ENST00000535927 PHKBQ93100 1093 aa18.73■□□□□ 0.59
VAMP1-205ENST00000535927 PIGSQ96S52 555 aa18.73■□□□□ 0.59
VAMP1-205ENST00000535927 BARHL2Q9NY43 387 aa18.73■□□□□ 0.59
VAMP1-205ENST00000535927 MRPL11Q9Y3B7 192 aaKnown RBP18.73■□□□□ 0.59
VAMP1-205ENST00000535927 ABCB11O95342 1321 aa18.73■□□□□ 0.59
VAMP1-205ENST00000535927 ESYT2A0FGR8 921 aa18.72■□□□□ 0.59
VAMP1-205ENST00000535927 CA12O43570 354 aa18.72■□□□□ 0.59
VAMP1-205ENST00000535927 FDPSP14324 419 aaKnown RBP18.72■□□□□ 0.59
VAMP1-205ENST00000535927 CALML3P27482 149 aa18.72■□□□□ 0.59
VAMP1-205ENST00000535927 GJB2P29033 226 aa18.72■□□□□ 0.59
VAMP1-205ENST00000535927 GNA11P29992 359 aa18.72■□□□□ 0.59
VAMP1-205ENST00000535927 DGKZQ13574 1117 aa18.72■□□□□ 0.59
VAMP1-205ENST00000535927 PKN1Q16512 942 aa18.72■□□□□ 0.59
VAMP1-205ENST00000535927 SLC35G1Q2M3R5 365 aa18.72■□□□□ 0.59
VAMP1-205ENST00000535927 QRICH1Q2TAL8 776 aa18.72■□□□□ 0.59
VAMP1-205ENST00000535927 FAM43AQ8N2R8 423 aa18.72■□□□□ 0.59
VAMP1-205ENST00000535927 ATG4CQ96DT6 458 aa18.72■□□□□ 0.59
VAMP1-205ENST00000535927 TEX13BQ9BXU2 312 aa18.72■□□□□ 0.59
VAMP1-205ENST00000535927 MORF4L1Q9UBU8 362 aa18.72■□□□□ 0.59
VAMP1-205ENST00000535927 FBXO40Q9UH90 709 aa18.72■□□□□ 0.59
VAMP1-205ENST00000535927 CCDC85CA6NKD9 419 aa18.71■□□□□ 0.59
VAMP1-205ENST00000535927 STAT3P40763 770 aa18.71■□□□□ 0.59
VAMP1-205ENST00000535927 GRM1Q13255 1194 aa18.71■□□□□ 0.59
VAMP1-205ENST00000535927 TAF1CQ15572 869 aaPredicted RBP18.71■□□□□ 0.59
VAMP1-205ENST00000535927 RASGRP2Q7LDG7 609 aa18.71■□□□□ 0.59
VAMP1-205ENST00000535927 MCF2L2Q86YR7 1114 aa18.71■□□□□ 0.59
VAMP1-205ENST00000535927 CMTR1Q8N1G2 835 aaKnown RBP18.71■□□□□ 0.59
VAMP1-205ENST00000535927 SHCBP1Q8NEM2 672 aa18.71■□□□□ 0.59
VAMP1-205ENST00000535927 CHST13Q8NET6 341 aa18.71■□□□□ 0.59
VAMP1-205ENST00000535927 REPS2Q8NFH8 660 aa18.71■□□□□ 0.59
VAMP1-205ENST00000535927 BICD2Q8TD16 824 aa18.71■□□□□ 0.59
VAMP1-205ENST00000535927 ALG1Q9BT22 464 aa18.71■□□□□ 0.59
VAMP1-205ENST00000535927 PCDHA1Q9Y5I3 950 aa18.71■□□□□ 0.59
VAMP1-205ENST00000535927 IGF2BP3O00425 579 aaKnown RBP eCLIP18.7■□□□□ 0.58
VAMP1-205ENST00000535927 TLR2O60603 784 aa18.7■□□□□ 0.58
VAMP1-205ENST00000535927 MRPL12P52815 198 aaKnown RBP18.7■□□□□ 0.58
VAMP1-205ENST00000535927 FAM110CQ1W6H9 321 aa18.7■□□□□ 0.58
VAMP1-205ENST00000535927 LARP1BQ659C4 914 aaKnown RBP18.7■□□□□ 0.58
VAMP1-205ENST00000535927 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.7■□□□□ 0.58
VAMP1-205ENST00000535927 HOMER1Q86YM7 354 aa18.7■□□□□ 0.58
VAMP1-205ENST00000535927 RIOX2Q8IUF8 465 aa18.7■□□□□ 0.58
VAMP1-205ENST00000535927 GPRC5AQ8NFJ5 357 aa18.7■□□□□ 0.58
VAMP1-205ENST00000535927 ZNF214Q9UL59 606 aaPredicted RBP18.7■□□□□ 0.58
VAMP1-205ENST00000535927 JAK2O60674 1132 aa18.69■□□□□ 0.58
VAMP1-205ENST00000535927 MLLT1Q03111 559 aaPredicted RBP18.69■□□□□ 0.58
VAMP1-205ENST00000535927 SAFBQ15424 915 aaKnown RBP eCLIP18.69■□□□□ 0.58
VAMP1-205ENST00000535927 NOM1Q5C9Z4 860 aaKnown RBP18.69■□□□□ 0.58
VAMP1-205ENST00000535927 FBXO18Q8NFZ0 1043 aa18.69■□□□□ 0.58
VAMP1-205ENST00000535927 DDX11Q96FC9 970 aa18.69■□□□□ 0.58
VAMP1-205ENST00000535927 C8orf76Q96K31 380 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms