RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 CTTNBP2Q8WZ74 1663 aa4.73□□□□□ -1.65
SNHG1-202ENST00000535689 LTBP3Q9NS15 1303 aa4.72□□□□□ -1.65
SNHG1-202ENST00000535689 TLDC2A0PJX2 215 aa4.72□□□□□ -1.65
SNHG1-202ENST00000535689 DYNC1LI2O43237 492 aaPredicted RBP4.72□□□□□ -1.65
SNHG1-202ENST00000535689 SIGLEC6O43699 453 aa4.72□□□□□ -1.65
SNHG1-202ENST00000535689 TP53P04637 393 aaPredicted RBP4.72□□□□□ -1.65
SNHG1-202ENST00000535689 NCLP19338 710 aaKnown RBP4.72□□□□□ -1.65
SNHG1-202ENST00000535689 POLR2BP30876 1174 aaKnown RBP4.72□□□□□ -1.65
SNHG1-202ENST00000535689 AMPD2Q01433 879 aa4.72□□□□□ -1.65
SNHG1-202ENST00000535689 PRKCQQ04759 706 aa4.72□□□□□ -1.65
SNHG1-202ENST00000535689 SSRP1Q08945 709 aaKnown RBP4.72□□□□□ -1.65
SNHG1-202ENST00000535689 NMIQ13287 307 aaPredicted RBP4.72□□□□□ -1.65
SNHG1-202ENST00000535689 BMS1Q14692 1282 aaKnown RBP4.72□□□□□ -1.65
SNHG1-202ENST00000535689 RNF111Q6ZNA4 994 aa4.72□□□□□ -1.65
SNHG1-202ENST00000535689 DTWD2Q8NBA8 298 aa4.72□□□□□ -1.65
SNHG1-202ENST00000535689 VWCEQ96DN2 955 aa4.72□□□□□ -1.65
SNHG1-202ENST00000535689 CDC6Q99741 560 aa4.72□□□□□ -1.65
SNHG1-202ENST00000535689 TNKS2Q9H2K2 1166 aa4.72□□□□□ -1.65
SNHG1-202ENST00000535689 LRRC4CQ9HCJ2 640 aa4.72□□□□□ -1.65
SNHG1-202ENST00000535689 GP6Q9HCN6 339 aa4.72□□□□□ -1.65
SNHG1-202ENST00000535689 LMCD1Q9NZU5 365 aa4.72□□□□□ -1.65
SNHG1-202ENST00000535689 AKT3Q9Y243 479 aa4.72□□□□□ -1.65
SNHG1-202ENST00000535689 ATP10AO60312 1499 aa4.72□□□□□ -1.65
SNHG1-202ENST00000535689 ATP10BO94823 1461 aa4.72□□□□□ -1.65
SNHG1-202ENST00000535689 RICTORQ6R327 1708 aa4.72□□□□□ -1.65
SNHG1-202ENST00000535689 FAM86C2PA6NEL3 165 aa4.71□□□□□ -1.66
SNHG1-202ENST00000535689 CCDC85CA6NKD9 419 aa4.71□□□□□ -1.66
SNHG1-202ENST00000535689 FAM170BA6NMN3 283 aa4.71□□□□□ -1.66
SNHG1-202ENST00000535689 HOXC12P31275 282 aa4.71□□□□□ -1.66
SNHG1-202ENST00000535689 OXCT1P55809 520 aa4.71□□□□□ -1.66
SNHG1-202ENST00000535689 ZYXQ15942 572 aaKnown RBP4.71□□□□□ -1.66
SNHG1-202ENST00000535689 EFCAB2Q5VUJ9 269 aa4.71□□□□□ -1.66
SNHG1-202ENST00000535689 IQCEQ6IPM2 695 aa4.71□□□□□ -1.66
SNHG1-202ENST00000535689 HOMER1Q86YM7 354 aa4.71□□□□□ -1.66
SNHG1-202ENST00000535689 KSR1Q8IVT5 923 aa4.71□□□□□ -1.66
SNHG1-202ENST00000535689 LRRN4CLQ8ND94 238 aa4.71□□□□□ -1.66
SNHG1-202ENST00000535689 AGBL5Q8NDL9 886 aa4.71□□□□□ -1.66
SNHG1-202ENST00000535689 APPBP2Q92624 585 aa4.71□□□□□ -1.66
SNHG1-202ENST00000535689 GATA6Q92908 595 aa4.71□□□□□ -1.66
SNHG1-202ENST00000535689 SNTG2Q9NY99 539 aa4.71□□□□□ -1.66
SNHG1-202ENST00000535689 ANGEL1Q9UNK9 670 aaKnown RBP4.71□□□□□ -1.66
SNHG1-202ENST00000535689 CAPN6Q9Y6Q1 641 aa4.71□□□□□ -1.66
SNHG1-202ENST00000535689 TRAPPC8Q9Y2L5 1435 aa4.71□□□□□ -1.66
SNHG1-202ENST00000535689 SUPT6HQ7KZ85 1726 aaKnown RBP4.7□□□□□ -1.66
SNHG1-202ENST00000535689 TRAV20A0A0B4J274 112 aa4.7□□□□□ -1.66
SNHG1-202ENST00000535689 IGSF3O75054 1194 aa4.7□□□□□ -1.66
SNHG1-202ENST00000535689 LEFTY1O75610 366 aa4.7□□□□□ -1.66
SNHG1-202ENST00000535689 TPP2P29144 1249 aaPredicted RBP4.7□□□□□ -1.66
SNHG1-202ENST00000535689 LTKP29376 864 aa4.7□□□□□ -1.66
SNHG1-202ENST00000535689 ADMP35318 185 aa4.7□□□□□ -1.66
SNHG1-202ENST00000535689 CEBPAP49715 358 aaPredicted RBP4.7□□□□□ -1.66
SNHG1-202ENST00000535689 TNK2Q07912 1038 aa4.7□□□□□ -1.66
SNHG1-202ENST00000535689 DUSP4Q13115 394 aa4.7□□□□□ -1.66
SNHG1-202ENST00000535689 RASA3Q14644 834 aa4.7□□□□□ -1.66
SNHG1-202ENST00000535689 PRSS36Q5K4E3 855 aa4.7□□□□□ -1.66
SNHG1-202ENST00000535689 AXDND1Q5T1B0 1012 aaPredicted RBP4.7□□□□□ -1.66
SNHG1-202ENST00000535689 ANGEL2Q5VTE6 544 aaKnown RBP4.7□□□□□ -1.66
SNHG1-202ENST00000535689 FAM214BQ7L5A3 538 aa4.7□□□□□ -1.66
SNHG1-202ENST00000535689 UBE3DQ7Z6J8 389 aa4.7□□□□□ -1.66
SNHG1-202ENST00000535689 VSIG10LQ86VR7 867 aa4.7□□□□□ -1.66
SNHG1-202ENST00000535689 TSPYL5Q86VY4 417 aaPredicted RBP4.7□□□□□ -1.66
SNHG1-202ENST00000535689 ZDHHC13Q8IUH4 622 aa4.7□□□□□ -1.66
SNHG1-202ENST00000535689 SCUBE1Q8IWY4 988 aa4.7□□□□□ -1.66
SNHG1-202ENST00000535689 ARHGEF39Q8N4T4 335 aa4.7□□□□□ -1.66
SNHG1-202ENST00000535689 RIN3Q8TB24 985 aa4.7□□□□□ -1.66
SNHG1-202ENST00000535689 AARSD1Q9BTE6 412 aaKnown RBP4.7□□□□□ -1.66
SNHG1-202ENST00000535689 SPATA9Q9BWV2 254 aa4.7□□□□□ -1.66
SNHG1-202ENST00000535689 PRDM14Q9GZV8 571 aa4.7□□□□□ -1.66
SNHG1-202ENST00000535689 KLHL25Q9H0H3 589 aa4.7□□□□□ -1.66
SNHG1-202ENST00000535689 DUSP13Q9UII6 198 aa4.7□□□□□ -1.66
SNHG1-202ENST00000535689 SLC5A6Q9Y289 635 aa4.7□□□□□ -1.66
SNHG1-202ENST00000535689 ZFYVE16Q7Z3T8 1539 aa4.7□□□□□ -1.66
SNHG1-202ENST00000535689 ARHGEF40Q8TER5 1519 aa4.7□□□□□ -1.66
SNHG1-202ENST00000535689 KDM2BQ8NHM5 1336 aa4.7□□□□□ -1.66
SNHG1-202ENST00000535689 LTBP4Q8N2S1 1624 aa4.69□□□□□ -1.66
SNHG1-202ENST00000535689 ZMYM4Q5VZL5 1548 aa4.69□□□□□ -1.66
SNHG1-202ENST00000535689 DNAJC25-GNG10A0A024R161 153 aa4.69□□□□□ -1.66
SNHG1-202ENST00000535689 TBC1D8O95759 1140 aa4.69□□□□□ -1.66
SNHG1-202ENST00000535689 EPHX1P07099 455 aa4.69□□□□□ -1.66
SNHG1-202ENST00000535689 HSD3B2P26439 372 aa4.69□□□□□ -1.66
SNHG1-202ENST00000535689 BMP8BP34820 402 aa4.69□□□□□ -1.66
SNHG1-202ENST00000535689 TCEA2Q15560 299 aa4.69□□□□□ -1.66
SNHG1-202ENST00000535689 CDKAL1Q5VV42 579 aa4.69□□□□□ -1.66
SNHG1-202ENST00000535689 TDRD10Q5VZ19 366 aaKnown RBP4.69□□□□□ -1.66
SNHG1-202ENST00000535689 CYP2R1Q6VVX0 501 aa4.69□□□□□ -1.66
SNHG1-202ENST00000535689 SPPL2CQ8IUH8 684 aa4.69□□□□□ -1.66
SNHG1-202ENST00000535689 FIBCD1Q8N539 461 aa4.69□□□□□ -1.66
SNHG1-202ENST00000535689 CELF2-AS1Q8N7Q2 184 aa4.69□□□□□ -1.66
SNHG1-202ENST00000535689 LINC00116Q8NCU8 138 aa4.69□□□□□ -1.66
SNHG1-202ENST00000535689 KCTD13Q8WZ19 329 aa4.69□□□□□ -1.66
SNHG1-202ENST00000535689 KLHL6Q8WZ60 621 aa4.69□□□□□ -1.66
SNHG1-202ENST00000535689 ZNF512BQ96KM6 892 aaPredicted RBP4.69□□□□□ -1.66
SNHG1-202ENST00000535689 HEXIM2Q96MH2 286 aaKnown RBP4.69□□□□□ -1.66
SNHG1-202ENST00000535689 ZSWIM5Q9P217 1185 aa4.69□□□□□ -1.66
SNHG1-202ENST00000535689 PTPRKQ15262 1439 aa4.69□□□□□ -1.66
SNHG1-202ENST00000535689 C9orf84Q5VXU9 1444 aa4.69□□□□□ -1.66
SNHG1-202ENST00000535689 CNTLNQ9NXG0 1405 aa4.69□□□□□ -1.66
SNHG1-202ENST00000535689 C9IYK1 514 aa4.68□□□□□ -1.66
SNHG1-202ENST00000535689 PPP1R12AO14974 1030 aaPredicted RBP4.68□□□□□ -1.66
SNHG1-202ENST00000535689 SRFP11831 508 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms