RNA–Protein interactions for RNA: ENST00000535601.5

HTATSF1-204, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 3,019 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-204ENST00000535601 REXO1Q8N1G1 1221 aaKnown RBP20.75■□□□□ 0.91
HTATSF1-204ENST00000535601 C6orf50Q9HD87 102 aa20.75■□□□□ 0.91
HTATSF1-204ENST00000535601 SLFN14P0C7P3 912 aa20.74■□□□□ 0.91
HTATSF1-204ENST00000535601 ICA1Q05084 483 aa20.74■□□□□ 0.91
HTATSF1-204ENST00000535601 DHX8Q14562 1220 aaKnown RBP20.74■□□□□ 0.91
HTATSF1-204ENST00000535601 ZYXQ15942 572 aaKnown RBP20.74■□□□□ 0.91
HTATSF1-204ENST00000535601 DNTTIP2Q5QJE6 756 aaKnown RBP20.74■□□□□ 0.91
HTATSF1-204ENST00000535601 TMEM39BQ9GZU3 492 aa20.74■□□□□ 0.91
HTATSF1-204ENST00000535601 GOLGA6L6A8MZA4 724 aa20.74■□□□□ 0.91
HTATSF1-204ENST00000535601 TDP2O95551 362 aa20.74■□□□□ 0.91
HTATSF1-204ENST00000535601 SNHG28P0DPA3 235 aa20.74■□□□□ 0.91
HTATSF1-204ENST00000535601 SLC1A4P43007 532 aa20.74■□□□□ 0.91
HTATSF1-204ENST00000535601 RSBN1LQ6PCB5 846 aaPredicted RBP20.74■□□□□ 0.91
HTATSF1-204ENST00000535601 SARM1Q6SZW1 724 aa20.74■□□□□ 0.91
HTATSF1-204ENST00000535601 TMC6Q7Z403 805 aa20.74■□□□□ 0.91
HTATSF1-204ENST00000535601 TMEM232C9JQI7 657 aa20.73■□□□□ 0.91
HTATSF1-204ENST00000535601 ECE1P42892 770 aa20.73■□□□□ 0.91
HTATSF1-204ENST00000535601 IKQ13123 557 aaPredicted RBP20.73■□□□□ 0.91
HTATSF1-204ENST00000535601 NOLC1Q14978 699 aaKnown RBP eCLIP20.73■□□□□ 0.91
HTATSF1-204ENST00000535601 ASPRV1Q53RT3 343 aa20.73■□□□□ 0.91
HTATSF1-204ENST00000535601 EGFRP00533 1210 aa20.73■□□□□ 0.91
HTATSF1-204ENST00000535601 TRAPPC10P48553 1259 aa20.73■□□□□ 0.91
HTATSF1-204ENST00000535601 FANCCQ00597 558 aa20.73■□□□□ 0.91
HTATSF1-204ENST00000535601 NONOQ15233 471 aaKnown RBP eCLIP20.73■□□□□ 0.91
HTATSF1-204ENST00000535601 ABCB5Q2M3G0 1257 aa20.73■□□□□ 0.91
HTATSF1-204ENST00000535601 PCNTO95613 3336 aa20.72■□□□□ 0.91
HTATSF1-204ENST00000535601 USP17L15C9J2P7 530 aa20.72■□□□□ 0.91
HTATSF1-204ENST00000535601 USP17L13C9JLJ4 530 aa20.72■□□□□ 0.91
HTATSF1-204ENST00000535601 USP17L11C9JVI0 530 aa20.72■□□□□ 0.91
HTATSF1-204ENST00000535601 USP17L18D6R9N7 530 aa20.72■□□□□ 0.91
HTATSF1-204ENST00000535601 USP17L22D6RA61 530 aa20.72■□□□□ 0.91
HTATSF1-204ENST00000535601 USP17L17D6RBQ6 530 aa20.72■□□□□ 0.91
HTATSF1-204ENST00000535601 USP17L19D6RCP7 530 aa20.72■□□□□ 0.91
HTATSF1-204ENST00000535601 USP17L20D6RJB6 530 aa20.72■□□□□ 0.91
HTATSF1-204ENST00000535601 TECP42680 631 aa20.72■□□□□ 0.91
HTATSF1-204ENST00000535601 SARSP49591 514 aaKnown RBP20.72■□□□□ 0.91
HTATSF1-204ENST00000535601 MYL5Q02045 173 aa20.72■□□□□ 0.91
HTATSF1-204ENST00000535601 USP17L24Q0WX57 530 aa20.72■□□□□ 0.91
HTATSF1-204ENST00000535601 E2F4Q16254 413 aa20.72■□□□□ 0.91
HTATSF1-204ENST00000535601 SLFN13Q68D06 897 aa20.72■□□□□ 0.91
HTATSF1-204ENST00000535601 USP17L6PQ6QN14 398 aa20.72■□□□□ 0.91
HTATSF1-204ENST00000535601 DTHD1Q6ZMT9 781 aa20.72■□□□□ 0.91
HTATSF1-204ENST00000535601 SAMSN1Q9NSI8 373 aaKnown RBP20.72■□□□□ 0.91
HTATSF1-204ENST00000535601 A0A1W2PRG0 241 aa20.72■□□□□ 0.91
HTATSF1-204ENST00000535601 SPDYE2BA6NHP3 402 aa20.72■□□□□ 0.91
HTATSF1-204ENST00000535601 SPDYE6P0CI01 402 aa20.72■□□□□ 0.91
HTATSF1-204ENST00000535601 MORC3Q14149 939 aa20.72■□□□□ 0.91
HTATSF1-204ENST00000535601 NBPF9Q3BBW0 867 aa20.72■□□□□ 0.91
HTATSF1-204ENST00000535601 USH1GQ495M9 461 aa20.72■□□□□ 0.91
HTATSF1-204ENST00000535601 SLC37A4O43826 429 aa20.72■□□□□ 0.91
HTATSF1-204ENST00000535601 DPYDQ12882 1025 aa20.72■□□□□ 0.91
HTATSF1-204ENST00000535601 DLGAP5Q15398 846 aa20.72■□□□□ 0.91
HTATSF1-204ENST00000535601 DAGLBQ8NCG7 672 aa20.72■□□□□ 0.91
HTATSF1-204ENST00000535601 SUPT20HQ8NEM7 779 aa20.72■□□□□ 0.91
HTATSF1-204ENST00000535601 DHX36Q9H2U1 1008 aaKnown RBP20.72■□□□□ 0.91
HTATSF1-204ENST00000535601 EDIL3O43854 480 aa20.71■□□□□ 0.91
HTATSF1-204ENST00000535601 BMP15O95972 392 aa20.71■□□□□ 0.91
HTATSF1-204ENST00000535601 SERPINC1P01008 464 aa20.71■□□□□ 0.91
HTATSF1-204ENST00000535601 TXKP42681 527 aa20.71■□□□□ 0.91
HTATSF1-204ENST00000535601 CC2D2BQ6DHV5 1058 aa20.71■□□□□ 0.91
HTATSF1-204ENST00000535601 MRFAP1L1Q96HT8 127 aa20.71■□□□□ 0.91
HTATSF1-204ENST00000535601 EHD4Q9H223 541 aa20.71■□□□□ 0.91
HTATSF1-204ENST00000535601 HOOK1Q9UJC3 728 aaKnown RBP20.71■□□□□ 0.91
HTATSF1-204ENST00000535601 NFE2L3Q9Y4A8 694 aa20.71■□□□□ 0.91
HTATSF1-204ENST00000535601 GNA11P29992 359 aa20.71■□□□□ 0.91
HTATSF1-204ENST00000535601 ADCY7P51828 1080 aa20.71■□□□□ 0.91
HTATSF1-204ENST00000535601 PDXDC2PQ6P474 469 aa20.71■□□□□ 0.91
HTATSF1-204ENST00000535601 BPIFA3Q9BQP9 254 aa20.71■□□□□ 0.91
HTATSF1-204ENST00000535601 OFD1O75665 1012 aa20.7■□□□□ 0.9
HTATSF1-204ENST00000535601 NEK8Q86SG6 692 aa20.7■□□□□ 0.9
HTATSF1-204ENST00000535601 KIAA1524Q8TCG1 905 aa20.7■□□□□ 0.9
HTATSF1-204ENST00000535601 ACER1Q8TDN7 264 aa20.7■□□□□ 0.9
HTATSF1-204ENST00000535601 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.7■□□□□ 0.9
HTATSF1-204ENST00000535601 ZNF70Q9UC06 446 aaPredicted RBP20.7■□□□□ 0.9
HTATSF1-204ENST00000535601 MYH7BA7E2Y1 1941 aa20.7■□□□□ 0.9
HTATSF1-204ENST00000535601 GREB1LQ9C091 1923 aaPredicted RBP20.7■□□□□ 0.9
HTATSF1-204ENST00000535601 F5H6K3 240 aa20.7■□□□□ 0.9
HTATSF1-204ENST00000535601 STAT6P42226 847 aa20.7■□□□□ 0.9
HTATSF1-204ENST00000535601 CXCL9Q07325 125 aa20.7■□□□□ 0.9
HTATSF1-204ENST00000535601 KLRC3Q07444 240 aa20.7■□□□□ 0.9
HTATSF1-204ENST00000535601 R3HDM1Q15032 1099 aaKnown RBP20.7■□□□□ 0.9
HTATSF1-204ENST00000535601 QRICH1Q2TAL8 776 aa20.7■□□□□ 0.9
HTATSF1-204ENST00000535601 KIAA1755Q5JYT7 1200 aa20.7■□□□□ 0.9
HTATSF1-204ENST00000535601 RTKN2Q8IZC4 609 aa20.7■□□□□ 0.9
HTATSF1-204ENST00000535601 PSDA5PKW4 1024 aaPredicted RBP20.7■□□□□ 0.9
HTATSF1-204ENST00000535601 NEMFO60524 1076 aa20.7■□□□□ 0.9
HTATSF1-204ENST00000535601 HDLBPQ00341 1268 aaKnown RBP20.7■□□□□ 0.9
HTATSF1-204ENST00000535601 OGFOD1Q8N543 542 aa20.7■□□□□ 0.9
HTATSF1-204ENST00000535601 SMTNL1A8MU46 457 aa20.69■□□□□ 0.9
HTATSF1-204ENST00000535601 NAALADL2Q58DX5 795 aa20.69■□□□□ 0.9
HTATSF1-204ENST00000535601 TATDN1Q6P1N9 297 aa20.69■□□□□ 0.9
HTATSF1-204ENST00000535601 SH3RF1Q7Z6J0 888 aa20.69■□□□□ 0.9
HTATSF1-204ENST00000535601 CREBRFQ8IUR6 639 aa20.69■□□□□ 0.9
HTATSF1-204ENST00000535601 CCDC12Q8WUD4 166 aaPredicted RBP20.69■□□□□ 0.9
HTATSF1-204ENST00000535601 PNMA6FA0A0J9YX94 578 aa20.69■□□□□ 0.9
HTATSF1-204ENST00000535601 NT5C2P49902 561 aa20.69■□□□□ 0.9
HTATSF1-204ENST00000535601 FKBP1AP62942 108 aaKnown RBP20.69■□□□□ 0.9
HTATSF1-204ENST00000535601 KRT25Q7Z3Z0 450 aa20.69■□□□□ 0.9
HTATSF1-204ENST00000535601 IQUBQ8NA54 791 aa20.69■□□□□ 0.9
HTATSF1-204ENST00000535601 EEF2KMTQ96G04 330 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms