RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 CCL14Q16627 93 aa26.54■■□□□ 1.84
SFSWAP-204ENST00000535399 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.54■■□□□ 1.84
SFSWAP-204ENST00000535399 CATIPQ7Z7H3 387 aa26.54■■□□□ 1.84
SFSWAP-204ENST00000535399 NPLOC4Q8TAT6 608 aa26.54■■□□□ 1.84
SFSWAP-204ENST00000535399 BIN2Q9UBW5 565 aaPredicted RBP26.54■■□□□ 1.84
SFSWAP-204ENST00000535399 MAD2L2Q9UI95 211 aa26.54■■□□□ 1.84
SFSWAP-204ENST00000535399 PALM3A6NDB9 673 aaPredicted RBP26.53■■□□□ 1.84
SFSWAP-204ENST00000535399 ICAM1P05362 532 aa26.53■■□□□ 1.84
SFSWAP-204ENST00000535399 TMTC2Q8N394 836 aa26.53■■□□□ 1.84
SFSWAP-204ENST00000535399 CHST13Q8NET6 341 aa26.53■■□□□ 1.84
SFSWAP-204ENST00000535399 TCEANC2Q96MN5 208 aa26.53■■□□□ 1.84
SFSWAP-204ENST00000535399 JAKMIP1Q96N16 626 aaKnown RBP26.53■■□□□ 1.84
SFSWAP-204ENST00000535399 HMGCRP04035 888 aa26.52■■□□□ 1.84
SFSWAP-204ENST00000535399 HMGB1P09429 215 aaKnown RBP26.52■■□□□ 1.84
SFSWAP-204ENST00000535399 TAL1P17542 331 aaPredicted RBP26.52■■□□□ 1.84
SFSWAP-204ENST00000535399 MTFR1Q15390 333 aa26.52■■□□□ 1.84
SFSWAP-204ENST00000535399 TKFCQ3LXA3 575 aa26.52■■□□□ 1.84
SFSWAP-204ENST00000535399 DPP9Q86TI2 863 aa26.52■■□□□ 1.84
SFSWAP-204ENST00000535399 TRMT44Q8IYL2 757 aaKnown RBP26.52■■□□□ 1.84
SFSWAP-204ENST00000535399 ADGRF4Q8IZF3 695 aa26.52■■□□□ 1.84
SFSWAP-204ENST00000535399 ZNF654Q8IZM8 581 aa26.52■■□□□ 1.84
SFSWAP-204ENST00000535399 MYCP01106 439 aaPredicted RBP26.51■■□□□ 1.83
SFSWAP-204ENST00000535399 UBXN2AP68543 259 aa26.51■■□□□ 1.83
SFSWAP-204ENST00000535399 TRIM32Q13049 653 aa26.51■■□□□ 1.83
SFSWAP-204ENST00000535399 KCTD2Q14681 263 aa26.51■■□□□ 1.83
SFSWAP-204ENST00000535399 MYL10Q9BUA6 226 aa26.51■■□□□ 1.83
SFSWAP-204ENST00000535399 HOMER2Q9NSB8 354 aa26.51■■□□□ 1.83
SFSWAP-204ENST00000535399 RNF146Q9NTX7 359 aa26.51■■□□□ 1.83
SFSWAP-204ENST00000535399 FLRT1Q9NZU1 646 aa26.51■■□□□ 1.83
SFSWAP-204ENST00000535399 FBXO40Q9UH90 709 aa26.51■■□□□ 1.83
SFSWAP-204ENST00000535399 CCPG1Q9ULG6 757 aa26.51■■□□□ 1.83
SFSWAP-204ENST00000535399 KLRF2D3W0D1 207 aa26.5■■□□□ 1.83
SFSWAP-204ENST00000535399 DDAH1O94760 285 aa26.5■■□□□ 1.83
SFSWAP-204ENST00000535399 IGHA2P01877 340 aa26.5■■□□□ 1.83
SFSWAP-204ENST00000535399 ALAS1P13196 640 aa26.5■■□□□ 1.83
SFSWAP-204ENST00000535399 CPA1P15085 419 aa26.5■■□□□ 1.83
SFSWAP-204ENST00000535399 SOX10P56693 466 aa26.5■■□□□ 1.83
SFSWAP-204ENST00000535399 SLC35G1Q2M3R5 365 aa26.5■■□□□ 1.83
SFSWAP-204ENST00000535399 NFXL1Q6ZNB6 911 aa26.5■■□□□ 1.83
SFSWAP-204ENST00000535399 SGMS1Q86VZ5 419 aa26.5■■□□□ 1.83
SFSWAP-204ENST00000535399 MAP3K14Q99558 947 aa26.5■■□□□ 1.83
SFSWAP-204ENST00000535399 ZNF236Q9UL36 1845 aa26.5■■□□□ 1.83
SFSWAP-204ENST00000535399 CCDC69A6NI79 296 aa26.49■■□□□ 1.83
SFSWAP-204ENST00000535399 PGK2P07205 417 aa26.49■■□□□ 1.83
SFSWAP-204ENST00000535399 NUP133Q8WUM0 1156 aa26.49■■□□□ 1.83
SFSWAP-204ENST00000535399 TRERF1Q96PN7 1200 aa26.49■■□□□ 1.83
SFSWAP-204ENST00000535399 ACAD9Q9H845 621 aa26.49■■□□□ 1.83
SFSWAP-204ENST00000535399 JMJD4Q9H9V9 463 aa26.49■■□□□ 1.83
SFSWAP-204ENST00000535399 DNAJC25-GNG10A0A024R161 153 aa26.48■■□□□ 1.83
SFSWAP-204ENST00000535399 CCL5P13501 91 aa26.48■■□□□ 1.83
SFSWAP-204ENST00000535399 CDC37Q16543 378 aaPredicted RBP26.48■■□□□ 1.83
SFSWAP-204ENST00000535399 ZNF792Q3KQV3 632 aa26.48■■□□□ 1.83
SFSWAP-204ENST00000535399 MUM1L1Q5H9M0 696 aa26.48■■□□□ 1.83
SFSWAP-204ENST00000535399 MAP3K21Q5TCX8 1036 aa26.48■■□□□ 1.83
SFSWAP-204ENST00000535399 BLOC1S2Q6QNY1 142 aa26.48■■□□□ 1.83
SFSWAP-204ENST00000535399 UNC93B1Q9H1C4 597 aa26.48■■□□□ 1.83
SFSWAP-204ENST00000535399 SLC5A4Q9NY91 659 aa26.48■■□□□ 1.83
SFSWAP-204ENST00000535399 POTEFA5A3E0 1075 aa26.47■■□□□ 1.83
SFSWAP-204ENST00000535399 OLFML2BQ68BL8 750 aa26.47■■□□□ 1.83
SFSWAP-204ENST00000535399 MTMR8Q96EF0 704 aa26.47■■□□□ 1.83
SFSWAP-204ENST00000535399 VAT1LQ9HCJ6 419 aa26.47■■□□□ 1.83
SFSWAP-204ENST00000535399 PNMA2Q9UL42 364 aa26.47■■□□□ 1.83
SFSWAP-204ENST00000535399 DIS3Q9Y2L1 958 aaKnown RBP26.47■■□□□ 1.83
SFSWAP-204ENST00000535399 SLC12A7Q9Y666 1083 aa26.47■■□□□ 1.83
SFSWAP-204ENST00000535399 SEC24BO95487 1268 aa26.46■■□□□ 1.83
SFSWAP-204ENST00000535399 RPS6KB1P23443 525 aa26.46■■□□□ 1.83
SFSWAP-204ENST00000535399 PSMA5P28066 241 aa26.46■■□□□ 1.83
SFSWAP-204ENST00000535399 DDX11Q96FC9 970 aa26.46■■□□□ 1.83
SFSWAP-204ENST00000535399 MAML3Q96JK9 1138 aa26.46■■□□□ 1.83
SFSWAP-204ENST00000535399 TMEM106CQ9BVX2 250 aa26.46■■□□□ 1.83
SFSWAP-204ENST00000535399 RIOX1Q9H6W3 641 aa26.46■■□□□ 1.83
SFSWAP-204ENST00000535399 A1CFQ9NQ94 594 aaKnown RBP26.46■■□□□ 1.83
SFSWAP-204ENST00000535399 CYTH3O43739 400 aa26.45■■□□□ 1.82
SFSWAP-204ENST00000535399 DHX16O60231 1041 aaKnown RBP26.45■■□□□ 1.82
SFSWAP-204ENST00000535399 PRKAR2AP13861 404 aaKnown RBP26.45■■□□□ 1.82
SFSWAP-204ENST00000535399 RXRAP19793 462 aa26.45■■□□□ 1.82
SFSWAP-204ENST00000535399 CASTP20810 708 aaKnown RBP26.45■■□□□ 1.82
SFSWAP-204ENST00000535399 CACNB2Q08289 660 aaPredicted RBP26.45■■□□□ 1.82
SFSWAP-204ENST00000535399 QRICH1Q2TAL8 776 aa26.45■■□□□ 1.82
SFSWAP-204ENST00000535399 C8orf34Q49A92 452 aa26.45■■□□□ 1.82
SFSWAP-204ENST00000535399 MFSD14CQ5VZR4 134 aa26.45■■□□□ 1.82
SFSWAP-204ENST00000535399 ANKRD35Q8N283 1001 aa26.45■■□□□ 1.82
SFSWAP-204ENST00000535399 CTCFLQ8NI51 663 aaPredicted RBP26.45■■□□□ 1.82
SFSWAP-204ENST00000535399 CLEC4DQ8WXI8 215 aa26.45■■□□□ 1.82
SFSWAP-204ENST00000535399 RNF208Q9H0X6 261 aa26.45■■□□□ 1.82
SFSWAP-204ENST00000535399 EIF5BO60841 1220 aaKnown RBP26.44■■□□□ 1.82
SFSWAP-204ENST00000535399 CALM1P0DP23 149 aa26.44■■□□□ 1.82
SFSWAP-204ENST00000535399 CALM2P0DP24 149 aa26.44■■□□□ 1.82
SFSWAP-204ENST00000535399 CALM3P0DP25 149 aa26.44■■□□□ 1.82
SFSWAP-204ENST00000535399 KIF5BP33176 963 aa26.44■■□□□ 1.82
SFSWAP-204ENST00000535399 APOA5Q6Q788 366 aa26.44■■□□□ 1.82
SFSWAP-204ENST00000535399 RAB11FIP4Q86YS3 637 aa26.44■■□□□ 1.82
SFSWAP-204ENST00000535399 ZSWIM6Q9HCJ5 1215 aa26.44■■□□□ 1.82
SFSWAP-204ENST00000535399 BRPF3Q9ULD4 1205 aa26.44■■□□□ 1.82
SFSWAP-204ENST00000535399 GTF3C3Q9Y5Q9 886 aa26.44■■□□□ 1.82
SFSWAP-204ENST00000535399 KIAA0100Q14667 2235 aaKnown RBP26.44■■□□□ 1.82
SFSWAP-204ENST00000535399 CYP2C19P33261 490 aa26.43■■□□□ 1.82
SFSWAP-204ENST00000535399 Q6ZUG5 572 aa26.43■■□□□ 1.82
SFSWAP-204ENST00000535399 FBXL16Q8N461 479 aa26.43■■□□□ 1.82
SFSWAP-204ENST00000535399 FGD4Q96M96 766 aa26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms