RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 CTTNBP2Q8WZ74 1663 aa13.88□□□□□ -0.19
SPG11-203ENST00000535302 TNKSO95271 1327 aa13.88□□□□□ -0.19
SPG11-203ENST00000535302 A0A087WWV3 80 aa13.88□□□□□ -0.19
SPG11-203ENST00000535302 BCRP11274 1271 aa13.88□□□□□ -0.19
SPG11-203ENST00000535302 MAP7Q14244 749 aa13.88□□□□□ -0.19
SPG11-203ENST00000535302 DENND2CQ68D51 928 aa13.88□□□□□ -0.19
SPG11-203ENST00000535302 BLIDQ8IZY5 108 aa13.88□□□□□ -0.19
SPG11-203ENST00000535302 IFIH1Q9BYX4 1025 aaKnown RBP13.88□□□□□ -0.19
SPG11-203ENST00000535302 KIAA0556O60303 1618 aa13.88□□□□□ -0.19
SPG11-203ENST00000535302 TMEM232C9JQI7 657 aa13.88□□□□□ -0.19
SPG11-203ENST00000535302 KCNA4P22459 653 aa13.88□□□□□ -0.19
SPG11-203ENST00000535302 KCTD1Q719H9 257 aa13.88□□□□□ -0.19
SPG11-203ENST00000535302 DDX25Q9UHL0 483 aaKnown RBP13.88□□□□□ -0.19
SPG11-203ENST00000535302 UBN2Q6ZU65 1347 aa13.88□□□□□ -0.19
SPG11-203ENST00000535302 GIGYF1O75420 1035 aaPredicted RBP13.88□□□□□ -0.19
SPG11-203ENST00000535302 ATP5JP18859 108 aa13.88□□□□□ -0.19
SPG11-203ENST00000535302 PHKA1P46020 1223 aa13.88□□□□□ -0.19
SPG11-203ENST00000535302 MORC3Q14149 939 aa13.88□□□□□ -0.19
SPG11-203ENST00000535302 SND1Q7KZF4 910 aaKnown RBP eCLIP13.88□□□□□ -0.19
SPG11-203ENST00000535302 IFT20Q8IY31 132 aa13.88□□□□□ -0.19
SPG11-203ENST00000535302 TMEM63CQ9P1W3 806 aa13.88□□□□□ -0.19
SPG11-203ENST00000535302 ASAP1Q9ULH1 1129 aa13.88□□□□□ -0.19
SPG11-203ENST00000535302 HSPD1P10809 573 aaKnown RBP13.88□□□□□ -0.19
SPG11-203ENST00000535302 INPP1P49441 399 aa13.88□□□□□ -0.19
SPG11-203ENST00000535302 DYNLL1P63167 89 aaKnown RBP13.88□□□□□ -0.19
SPG11-203ENST00000535302 RPS6KA1Q15418 735 aa13.88□□□□□ -0.19
SPG11-203ENST00000535302 GPR101Q96P66 508 aaPredicted RBP13.88□□□□□ -0.19
SPG11-203ENST00000535302 ZMYM4Q5VZL5 1548 aa13.87□□□□□ -0.19
SPG11-203ENST00000535302 PDE6AP16499 860 aa13.87□□□□□ -0.19
SPG11-203ENST00000535302 LIG4P49917 911 aa13.87□□□□□ -0.19
SPG11-203ENST00000535302 CCDC127Q96BQ5 260 aa13.87□□□□□ -0.19
SPG11-203ENST00000535302 ALKBH8Q96BT7 664 aaKnown RBP13.87□□□□□ -0.19
SPG11-203ENST00000535302 ERO1AQ96HE7 468 aa13.87□□□□□ -0.19
SPG11-203ENST00000535302 JADE1Q6IE81 842 aa13.87□□□□□ -0.19
SPG11-203ENST00000535302 USP28Q96RU2 1077 aa13.87□□□□□ -0.19
SPG11-203ENST00000535302 DSCC1Q9BVC3 393 aa13.87□□□□□ -0.19
SPG11-203ENST00000535302 USP44Q9H0E7 712 aa13.87□□□□□ -0.19
SPG11-203ENST00000535302 ANLNQ9NQW6 1124 aa13.87□□□□□ -0.19
SPG11-203ENST00000535302 COG7P83436 770 aa13.87□□□□□ -0.19
SPG11-203ENST00000535302 PNMA1Q8ND90 353 aa13.87□□□□□ -0.19
SPG11-203ENST00000535302 M0R2C6 588 aa13.87□□□□□ -0.19
SPG11-203ENST00000535302 TRIM37O94972 964 aa13.87□□□□□ -0.19
SPG11-203ENST00000535302 SLC16A2P36021 539 aa13.87□□□□□ -0.19
SPG11-203ENST00000535302 SNAP25P60880 206 aa13.87□□□□□ -0.19
SPG11-203ENST00000535302 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.87□□□□□ -0.19
SPG11-203ENST00000535302 KLRF2D3W0D1 207 aa13.87□□□□□ -0.19
SPG11-203ENST00000535302 FLOT1O75955 427 aa13.87□□□□□ -0.19
SPG11-203ENST00000535302 GDF11O95390 407 aa13.87□□□□□ -0.19
SPG11-203ENST00000535302 PDE6BP35913 854 aa13.87□□□□□ -0.19
SPG11-203ENST00000535302 MUM1Q2TAK8 710 aa13.87□□□□□ -0.19
SPG11-203ENST00000535302 HDAC11Q96DB2 347 aa13.87□□□□□ -0.19
SPG11-203ENST00000535302 NUP58Q9BVL2 599 aa13.87□□□□□ -0.19
SPG11-203ENST00000535302 MYSM1Q5VVJ2 828 aa13.86□□□□□ -0.19
SPG11-203ENST00000535302 ANKRD35Q8N283 1001 aa13.86□□□□□ -0.19
SPG11-203ENST00000535302 RNF10Q8N5U6 811 aaKnown RBP13.86□□□□□ -0.19
SPG11-203ENST00000535302 PPP1R2P41236 205 aa13.86□□□□□ -0.19
SPG11-203ENST00000535302 ARPP19P56211 112 aa13.86□□□□□ -0.19
SPG11-203ENST00000535302 CDC26Q8NHZ8 85 aa13.86□□□□□ -0.19
SPG11-203ENST00000535302 DBNDD1Q9H9R9 158 aa13.86□□□□□ -0.19
SPG11-203ENST00000535302 SEC31BQ9NQW1 1179 aa13.86□□□□□ -0.19
SPG11-203ENST00000535302 OGFRQ9NZT2 677 aa13.86□□□□□ -0.19
SPG11-203ENST00000535302 AOX1Q06278 1338 aa13.86□□□□□ -0.19
SPG11-203ENST00000535302 TUBB4AP04350 444 aa13.86□□□□□ -0.19
SPG11-203ENST00000535302 BTBD18B2RXH4 712 aa13.86□□□□□ -0.19
SPG11-203ENST00000535302 KCNK3O14649 394 aa13.86□□□□□ -0.19
SPG11-203ENST00000535302 FGAP02671 866 aa13.86□□□□□ -0.19
SPG11-203ENST00000535302 POLR2MP0CAP2 368 aa13.86□□□□□ -0.19
SPG11-203ENST00000535302 PEX19P40855 299 aa13.86□□□□□ -0.19
SPG11-203ENST00000535302 TRIM56Q9BRZ2 755 aaKnown RBP13.86□□□□□ -0.19
SPG11-203ENST00000535302 MAD1L1Q9Y6D9 718 aa13.86□□□□□ -0.19
SPG11-203ENST00000535302 MAST1Q9Y2H9 1570 aa13.86□□□□□ -0.19
SPG11-203ENST00000535302 DKC1O60832 514 aaKnown RBP eCLIP13.86□□□□□ -0.19
SPG11-203ENST00000535302 SERPINB6P35237 376 aa13.86□□□□□ -0.19
SPG11-203ENST00000535302 POLR2FP61218 127 aaKnown RBP13.86□□□□□ -0.19
SPG11-203ENST00000535302 OTUD6AQ7L8S5 288 aa13.86□□□□□ -0.19
SPG11-203ENST00000535302 ARFGAP2Q8N6H7 521 aa13.86□□□□□ -0.19
SPG11-203ENST00000535302 BNIP3LO60238 219 aa13.85□□□□□ -0.19
SPG11-203ENST00000535302 CRKLP46109 303 aaKnown RBP13.85□□□□□ -0.19
SPG11-203ENST00000535302 ICA1Q05084 483 aa13.85□□□□□ -0.19
SPG11-203ENST00000535302 RAPH1Q70E73 1250 aa13.85□□□□□ -0.19
SPG11-203ENST00000535302 TAOK1Q7L7X3 1001 aa13.85□□□□□ -0.19
SPG11-203ENST00000535302 PCDHA12Q9UN75 941 aa13.85□□□□□ -0.19
SPG11-203ENST00000535302 ZBTB24O43167 697 aaPredicted RBP13.85□□□□□ -0.19
SPG11-203ENST00000535302 LTKP29376 864 aa13.85□□□□□ -0.19
SPG11-203ENST00000535302 OAS2P29728 719 aaKnown RBP13.85□□□□□ -0.19
SPG11-203ENST00000535302 TRIM50Q86XT4 487 aa13.85□□□□□ -0.19
SPG11-203ENST00000535302 NOSTRINQ8IVI9 506 aa13.85□□□□□ -0.19
SPG11-203ENST00000535302 PRPF38AQ8NAV1 312 aaKnown RBP13.85□□□□□ -0.19
SPG11-203ENST00000535302 RPSAP08865 295 aaKnown RBP13.85□□□□□ -0.19
SPG11-203ENST00000535302 KRT71Q3SY84 523 aa13.85□□□□□ -0.19
SPG11-203ENST00000535302 ZBTB41Q5SVQ8 909 aa13.85□□□□□ -0.19
SPG11-203ENST00000535302 FANCBQ8NB91 859 aa13.85□□□□□ -0.19
SPG11-203ENST00000535302 LZTS2Q9BRK4 669 aa13.85□□□□□ -0.19
SPG11-203ENST00000535302 G3BP2Q9UN86 482 aaKnown RBP13.85□□□□□ -0.19
SPG11-203ENST00000535302 MMEL1Q495T6 779 aa13.85□□□□□ -0.19
SPG11-203ENST00000535302 B4GALNT4Q76KP1 1039 aa13.85□□□□□ -0.19
SPG11-203ENST00000535302 CABS1Q96KC9 395 aa13.85□□□□□ -0.19
SPG11-203ENST00000535302 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.85□□□□□ -0.19
SPG11-203ENST00000535302 LRRIQ4A6NIV6 560 aa13.85□□□□□ -0.19
SPG11-203ENST00000535302 ECE1P42892 770 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms