RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 CCDC114Q96M63 670 aa5.88□□□□□ -1.47
SNHG1-201ENST00000535076 TCHPQ9BT92 498 aa5.88□□□□□ -1.47
SNHG1-201ENST00000535076 CAPS2Q9BXY5 557 aa5.88□□□□□ -1.47
SNHG1-201ENST00000535076 PCDH18Q9HCL0 1135 aa5.88□□□□□ -1.47
SNHG1-201ENST00000535076 ARGLU1Q9NWB6 273 aaPredicted RBP5.88□□□□□ -1.47
SNHG1-201ENST00000535076 MKS1Q9NXB0 559 aa5.88□□□□□ -1.47
SNHG1-201ENST00000535076 TRMT1Q9NXH9 659 aaKnown RBP5.88□□□□□ -1.47
SNHG1-201ENST00000535076 CHPF2Q9P2E5 772 aa5.88□□□□□ -1.47
SNHG1-201ENST00000535076 ZNF510Q9Y2H8 683 aa5.88□□□□□ -1.47
SNHG1-201ENST00000535076 LUC7L2Q9Y383 392 aaKnown RBP5.88□□□□□ -1.47
SNHG1-201ENST00000535076 ELP1O95163 1332 aa5.88□□□□□ -1.47
SNHG1-201ENST00000535076 CCDC171Q6TFL3 1326 aa5.88□□□□□ -1.47
SNHG1-201ENST00000535076 PLEKHH1Q9ULM0 1364 aa5.88□□□□□ -1.47
SNHG1-201ENST00000535076 CECR2Q9BXF3 1484 aa5.88□□□□□ -1.47
SNHG1-201ENST00000535076 BAZ1AQ9NRL2 1556 aaPredicted RBP5.88□□□□□ -1.47
SNHG1-201ENST00000535076 TARSL2A2RTX5 802 aaKnown RBP5.87□□□□□ -1.47
SNHG1-201ENST00000535076 GOLGA6L4A6NEF3 574 aa5.87□□□□□ -1.47
SNHG1-201ENST00000535076 TMEM88BA6NKF7 163 aa5.87□□□□□ -1.47
SNHG1-201ENST00000535076 EIF3FO00303 357 aaPredicted RBP5.87□□□□□ -1.47
SNHG1-201ENST00000535076 SGTAO43765 313 aa5.87□□□□□ -1.47
SNHG1-201ENST00000535076 TBCAO75347 108 aaKnown RBP5.87□□□□□ -1.47
SNHG1-201ENST00000535076 PENKP01210 267 aaPredicted RBP5.87□□□□□ -1.47
SNHG1-201ENST00000535076 H2AFXP16104 143 aaPredicted RBP5.87□□□□□ -1.47
SNHG1-201ENST00000535076 S100A5P33763 92 aa5.87□□□□□ -1.47
SNHG1-201ENST00000535076 BAG6P46379 1132 aa5.87□□□□□ -1.47
SNHG1-201ENST00000535076 FNTAP49354 379 aa5.87□□□□□ -1.47
SNHG1-201ENST00000535076 PAPOLAP51003 745 aaKnown RBP5.87□□□□□ -1.47
SNHG1-201ENST00000535076 AFF1P51825 1210 aaKnown RBP5.87□□□□□ -1.47
SNHG1-201ENST00000535076 TUBA1BP68363 451 aa5.87□□□□□ -1.47
SNHG1-201ENST00000535076 SCRN1Q12765 414 aa5.87□□□□□ -1.47
SNHG1-201ENST00000535076 ZBTB17Q13105 803 aa5.87□□□□□ -1.47
SNHG1-201ENST00000535076 BIRC3Q13489 604 aa5.87□□□□□ -1.47
SNHG1-201ENST00000535076 RAB3GAP1Q15042 981 aa5.87□□□□□ -1.47
SNHG1-201ENST00000535076 RCN1Q15293 331 aa5.87□□□□□ -1.47
SNHG1-201ENST00000535076 GRIK5Q16478 980 aa5.87□□□□□ -1.47
SNHG1-201ENST00000535076 GNPTABQ3T906 1256 aa5.87□□□□□ -1.47
SNHG1-201ENST00000535076 CCDC14Q49A88 953 aa5.87□□□□□ -1.47
SNHG1-201ENST00000535076 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.87□□□□□ -1.471e-323■□□□□ 9.2
SNHG1-201ENST00000535076 Q4G0T1 1027 aa5.87□□□□□ -1.47
SNHG1-201ENST00000535076 SH2D4BQ5SQS7 431 aa5.87□□□□□ -1.47
SNHG1-201ENST00000535076 PERM1Q5SV97 790 aa5.87□□□□□ -1.47
SNHG1-201ENST00000535076 AGAP9Q5VTM2 703 aa5.87□□□□□ -1.47
SNHG1-201ENST00000535076 CCBE1Q6UXH8 406 aaPredicted RBP5.87□□□□□ -1.47
SNHG1-201ENST00000535076 TUBA1AQ71U36 451 aa5.87□□□□□ -1.47
SNHG1-201ENST00000535076 SAPCD2Q86UD0 394 aa5.87□□□□□ -1.47
SNHG1-201ENST00000535076 LURAP1LQ8IV03 231 aa5.87□□□□□ -1.47
SNHG1-201ENST00000535076 CCDC146Q8IYE0 955 aa5.87□□□□□ -1.47
SNHG1-201ENST00000535076 CLASRPQ8N2M8 674 aaKnown RBP5.87□□□□□ -1.47
SNHG1-201ENST00000535076 TTC39CQ8N584 583 aa5.87□□□□□ -1.47
SNHG1-201ENST00000535076 PRPF38AQ8NAV1 312 aaKnown RBP5.87□□□□□ -1.47
SNHG1-201ENST00000535076 SLC43A3Q8NBI5 491 aa5.87□□□□□ -1.47
SNHG1-201ENST00000535076 CUL5Q93034 780 aa5.87□□□□□ -1.47
SNHG1-201ENST00000535076 COL26A1Q96A83 441 aa5.87□□□□□ -1.47
SNHG1-201ENST00000535076 RUNDC1Q96C34 613 aa5.87□□□□□ -1.47
SNHG1-201ENST00000535076 RBM41Q96IZ5 413 aaKnown RBP5.87□□□□□ -1.47
SNHG1-201ENST00000535076 CABS1Q96KC9 395 aa5.87□□□□□ -1.47
SNHG1-201ENST00000535076 TBC1D32Q96NH3 1257 aa5.87□□□□□ -1.47
SNHG1-201ENST00000535076 CORO1BQ9BR76 489 aa5.87□□□□□ -1.47
SNHG1-201ENST00000535076 SRRTQ9BXP5 876 aaKnown RBP5.87□□□□□ -1.47
SNHG1-201ENST00000535076 CCDC68Q9H2F9 335 aa5.87□□□□□ -1.47
SNHG1-201ENST00000535076 NOP53Q9NZM5 478 aaKnown RBP5.87□□□□□ -1.47
SNHG1-201ENST00000535076 STIM2Q9P246 746 aa5.87□□□□□ -1.47
SNHG1-201ENST00000535076 CFAP45Q9UL16 551 aa5.87□□□□□ -1.47
SNHG1-201ENST00000535076 DIS3Q9Y2L1 958 aaKnown RBP5.87□□□□□ -1.47
SNHG1-201ENST00000535076 NOSIPQ9Y314 301 aaKnown RBP5.87□□□□□ -1.47
SNHG1-201ENST00000535076 MAPK8IP3Q9UPT6 1336 aa5.87□□□□□ -1.47
SNHG1-201ENST00000535076 CCNB3Q8WWL7 1395 aa5.87□□□□□ -1.47
SNHG1-201ENST00000535076 CTTNBP2Q8WZ74 1663 aa5.87□□□□□ -1.47
SNHG1-201ENST00000535076 INSRP06213 1382 aa5.86□□□□□ -1.47
SNHG1-201ENST00000535076 TNIKQ9UKE5 1360 aa5.86□□□□□ -1.47
SNHG1-201ENST00000535076 hCG_2014768A0A024R1R8 64 aa5.86□□□□□ -1.47
SNHG1-201ENST00000535076 ERICH2A1L162 156 aa5.86□□□□□ -1.47
SNHG1-201ENST00000535076 SPDYE3A6NKU9 549 aa5.86□□□□□ -1.47
SNHG1-201ENST00000535076 ENO4A6NNW6 628 aa5.86□□□□□ -1.47
SNHG1-201ENST00000535076 BOLA2-SMG1P6H3BVE0 249 aa5.86□□□□□ -1.47
SNHG1-201ENST00000535076 ABLIM1O14639 778 aa5.86□□□□□ -1.47
SNHG1-201ENST00000535076 ERLIN2O94905 339 aa5.86□□□□□ -1.47
SNHG1-201ENST00000535076 CPB1P15086 417 aa5.86□□□□□ -1.47
SNHG1-201ENST00000535076 DESP17661 470 aa5.86□□□□□ -1.47
SNHG1-201ENST00000535076 ATP2B4P23634 1241 aa5.86□□□□□ -1.47
SNHG1-201ENST00000535076 EVA1CP58658 441 aa5.86□□□□□ -1.47
SNHG1-201ENST00000535076 ARPC4P59998 168 aa5.86□□□□□ -1.47
SNHG1-201ENST00000535076 DYNC1I2Q13409 638 aaKnown RBP5.86□□□□□ -1.47
SNHG1-201ENST00000535076 NAA16Q6N069 864 aaPredicted RBP5.86□□□□□ -1.47
SNHG1-201ENST00000535076 PSAPL1Q6NUJ1 521 aa5.86□□□□□ -1.47
SNHG1-201ENST00000535076 SLC30A9Q6PML9 568 aa5.86□□□□□ -1.47
SNHG1-201ENST00000535076 LRSAM1Q6UWE0 723 aa5.86□□□□□ -1.47
SNHG1-201ENST00000535076 ATF7IPQ6VMQ6 1270 aa5.86□□□□□ -1.47
SNHG1-201ENST00000535076 DHX32Q7L7V1 743 aaKnown RBP5.86□□□□□ -1.47
SNHG1-201ENST00000535076 WAPLQ7Z5K2 1190 aa5.86□□□□□ -1.47
SNHG1-201ENST00000535076 DZIP1Q86YF9 867 aaKnown RBP5.86□□□□□ -1.47
SNHG1-201ENST00000535076 RPAP2Q8IXW5 612 aaPredicted RBP5.86□□□□□ -1.47
SNHG1-201ENST00000535076 STK11IPQ8N1F8 1099 aa5.86□□□□□ -1.47
SNHG1-201ENST00000535076 KIAA1958Q8N8K9 716 aa5.86□□□□□ -1.47
SNHG1-201ENST00000535076 UHMK1Q8TAS1 419 aaKnown RBP5.86□□□□□ -1.47
SNHG1-201ENST00000535076 ACMSDQ8TDX5 336 aa5.86□□□□□ -1.47
SNHG1-201ENST00000535076 PARD3BQ8TEW8 1205 aa5.86□□□□□ -1.47
SNHG1-201ENST00000535076 PNMA5Q96PV4 448 aa5.86□□□□□ -1.47
SNHG1-201ENST00000535076 LPIN3Q9BQK8 851 aa5.86□□□□□ -1.47
SNHG1-201ENST00000535076 TRIM4Q9C037 500 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms