RNA–Protein interactions for RNA: ENST00000534556.1

USH1C-210, Transcript of USH1 protein network component harmonin, humanhuman

TSL 3

Gene USH1C, Length 244 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-210ENST00000534556 PAWRQ96IZ0 340 aaKnown RBP5.98□□□□□ -1.45
USH1C-210ENST00000534556 UBA5Q9GZZ9 404 aa5.98□□□□□ -1.45
USH1C-210ENST00000534556 KATNBL1Q9H079 304 aa5.98□□□□□ -1.45
USH1C-210ENST00000534556 MROH8Q9H579 483 aa5.98□□□□□ -1.45
USH1C-210ENST00000534556 HMX1Q9NP08 348 aaPredicted RBP5.98□□□□□ -1.45
USH1C-210ENST00000534556 GPCPD1Q9NPB8 672 aa5.98□□□□□ -1.45
USH1C-210ENST00000534556 TOMM22Q9NS69 142 aa5.98□□□□□ -1.45
USH1C-210ENST00000534556 FEM1BQ9UK73 627 aa5.98□□□□□ -1.45
USH1C-210ENST00000534556 OGDHLQ9ULD0 1010 aa5.98□□□□□ -1.45
USH1C-210ENST00000534556 SYNPO2Q9UMS6 1093 aa5.98□□□□□ -1.45
USH1C-210ENST00000534556 RBM8AQ9Y5S9 174 aaKnown RBP5.98□□□□□ -1.45
USH1C-210ENST00000534556 RAD50Q92878 1312 aa5.98□□□□□ -1.45
USH1C-210ENST00000534556 PTPRSQ13332 1948 aa5.97□□□□□ -1.45
USH1C-210ENST00000534556 SCN10AQ9Y5Y9 1956 aa5.97□□□□□ -1.45
USH1C-210ENST00000534556 STRNO43815 780 aa5.97□□□□□ -1.45
USH1C-210ENST00000534556 FARP2O94887 1054 aaPredicted RBP5.97□□□□□ -1.45
USH1C-210ENST00000534556 SLC25A27O95847 323 aa5.97□□□□□ -1.45
USH1C-210ENST00000534556 TFRCP02786 760 aaKnown RBP5.97□□□□□ -1.45
USH1C-210ENST00000534556 SLC3A2P08195 630 aaKnown RBP5.97□□□□□ -1.45
USH1C-210ENST00000534556 ZNF865P0CJ78 1059 aaPredicted RBP5.97□□□□□ -1.45
USH1C-210ENST00000534556 COL6A1P12109 1028 aa5.97□□□□□ -1.45
USH1C-210ENST00000534556 SLC1A4P43007 532 aa5.97□□□□□ -1.45
USH1C-210ENST00000534556 STAT2P52630 851 aa5.97□□□□□ -1.45
USH1C-210ENST00000534556 ZNF543Q08ER8 600 aa5.97□□□□□ -1.45
USH1C-210ENST00000534556 NECTIN1Q15223 517 aa5.97□□□□□ -1.45
USH1C-210ENST00000534556 BMP2KLQ5H9B9 411 aa5.97□□□□□ -1.45
USH1C-210ENST00000534556 OLFML2BQ68BL8 750 aa5.97□□□□□ -1.45
USH1C-210ENST00000534556 CCDC174Q6PII3 467 aa5.97□□□□□ -1.45
USH1C-210ENST00000534556 MB21D2Q8IYB1 491 aaPredicted RBP5.97□□□□□ -1.45
USH1C-210ENST00000534556 RASEFQ8IZ41 740 aa5.97□□□□□ -1.45
USH1C-210ENST00000534556 ABRAQ8N0Z2 381 aa5.97□□□□□ -1.45
USH1C-210ENST00000534556 FAM133AQ8N9E0 248 aa5.97□□□□□ -1.45
USH1C-210ENST00000534556 TET1Q8NFU7 2136 aa5.97□□□□□ -1.45
USH1C-210ENST00000534556 DCAF4Q8WV16 495 aa5.97□□□□□ -1.45
USH1C-210ENST00000534556 CLEC4DQ8WXI8 215 aa5.97□□□□□ -1.45
USH1C-210ENST00000534556 MMP19Q99542 508 aa5.97□□□□□ -1.45
USH1C-210ENST00000534556 TEX13BQ9BXU2 312 aa5.97□□□□□ -1.45
USH1C-210ENST00000534556 RANBP17Q9H2T7 1088 aaKnown RBP5.97□□□□□ -1.45
USH1C-210ENST00000534556 ZNF287Q9HBT7 754 aa5.97□□□□□ -1.45
USH1C-210ENST00000534556 A1CFQ9NQ94 594 aaKnown RBP5.97□□□□□ -1.45
USH1C-210ENST00000534556 HOMER2Q9NSB8 354 aa5.97□□□□□ -1.45
USH1C-210ENST00000534556 TNKSO95271 1327 aa5.97□□□□□ -1.45
USH1C-210ENST00000534556 MYADML2A6NDP7 307 aa5.96□□□□□ -1.46
USH1C-210ENST00000534556 H0YGN5 161 aa5.96□□□□□ -1.46
USH1C-210ENST00000534556 NFIBO00712 420 aa5.96□□□□□ -1.46
USH1C-210ENST00000534556 OPLAHO14841 1288 aa5.96□□□□□ -1.46
USH1C-210ENST00000534556 SLC27A2O14975 620 aa5.96□□□□□ -1.46
USH1C-210ENST00000534556 CTAGE5O15320 804 aa5.96□□□□□ -1.46
USH1C-210ENST00000534556 CYTH3O43739 400 aa5.96□□□□□ -1.46
USH1C-210ENST00000534556 PPP1R11O60927 126 aaPredicted RBP5.96□□□□□ -1.46
USH1C-210ENST00000534556 ZBED4O75132 1171 aa5.96□□□□□ -1.46
USH1C-210ENST00000534556 PCP11498 1178 aaKnown RBP5.96□□□□□ -1.46
USH1C-210ENST00000534556 FCER1AP12319 257 aa5.96□□□□□ -1.46
USH1C-210ENST00000534556 ALAS1P13196 640 aa5.96□□□□□ -1.46
USH1C-210ENST00000534556 MFAP1P55081 439 aaKnown RBP5.96□□□□□ -1.46
USH1C-210ENST00000534556 IMMTQ16891 758 aaKnown RBP5.96□□□□□ -1.46
USH1C-210ENST00000534556 LRRC26Q2I0M4 334 aa5.96□□□□□ -1.46
USH1C-210ENST00000534556 CCDC96Q2M329 555 aa5.96□□□□□ -1.46
USH1C-210ENST00000534556 ADCK5Q3MIX3 580 aa5.96□□□□□ -1.46
USH1C-210ENST00000534556 SYDE2Q5VT97 1194 aa5.96□□□□□ -1.46
USH1C-210ENST00000534556 MAMDC4Q6UXC1 1216 aa5.96□□□□□ -1.46
USH1C-210ENST00000534556 DPP9Q86TI2 863 aa5.96□□□□□ -1.46
USH1C-210ENST00000534556 FAM160B2Q86V87 743 aa5.96□□□□□ -1.46
USH1C-210ENST00000534556 DGKHQ86XP1 1220 aa5.96□□□□□ -1.46
USH1C-210ENST00000534556 CCAR1Q8IX12 1150 aaKnown RBP5.96□□□□□ -1.46
USH1C-210ENST00000534556 PNMA1Q8ND90 353 aa5.96□□□□□ -1.46
USH1C-210ENST00000534556 IGDCC4Q8TDY8 1250 aa5.96□□□□□ -1.46
USH1C-210ENST00000534556 CHURC1Q8WUH1 139 aa5.96□□□□□ -1.46
USH1C-210ENST00000534556 ESR2Q92731 530 aa5.96□□□□□ -1.46
USH1C-210ENST00000534556 TTC14Q96N46 770 aa5.96□□□□□ -1.46
USH1C-210ENST00000534556 ZSCAN10Q96SZ4 725 aaPredicted RBP5.96□□□□□ -1.46
USH1C-210ENST00000534556 TINF2Q9BSI4 451 aa5.96□□□□□ -1.46
USH1C-210ENST00000534556 PRO3102Q9H379 93 aa5.96□□□□□ -1.46
USH1C-210ENST00000534556 RNF146Q9NTX7 359 aa5.96□□□□□ -1.46
USH1C-210ENST00000534556 MAD2L2Q9UI95 211 aa5.96□□□□□ -1.46
USH1C-210ENST00000534556 IVNS1ABPQ9Y6Y0 642 aa5.96□□□□□ -1.46
USH1C-210ENST00000534556 KAT6AQ92794 2004 aa5.96□□□□□ -1.46
USH1C-210ENST00000534556 CDH23Q9H251 3354 aa5.95□□□□□ -1.46
USH1C-210ENST00000534556 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.95□□□□□ -1.46
USH1C-210ENST00000534556 CPA1P15085 419 aa5.95□□□□□ -1.46
USH1C-210ENST00000534556 CNGA1P29973 690 aa5.95□□□□□ -1.46
USH1C-210ENST00000534556 OAZ1P54368 228 aa5.95□□□□□ -1.46
USH1C-210ENST00000534556 GJC2Q5T442 439 aaPredicted RBP5.95□□□□□ -1.46
USH1C-210ENST00000534556 MFSD14CQ5VZR4 134 aa5.95□□□□□ -1.46
USH1C-210ENST00000534556 CREB3L3Q68CJ9 461 aa5.95□□□□□ -1.46
USH1C-210ENST00000534556 SLC30A10Q6XR72 485 aa5.95□□□□□ -1.46
USH1C-210ENST00000534556 TRMT44Q8IYL2 757 aaKnown RBP5.95□□□□□ -1.46
USH1C-210ENST00000534556 ADGRF4Q8IZF3 695 aa5.95□□□□□ -1.46
USH1C-210ENST00000534556 MTMR8Q96EF0 704 aa5.95□□□□□ -1.46
USH1C-210ENST00000534556 CCDC136Q96JN2 1154 aa5.95□□□□□ -1.46
USH1C-210ENST00000534556 TCEANC2Q96MN5 208 aa5.95□□□□□ -1.46
USH1C-210ENST00000534556 TRERF1Q96PN7 1200 aa5.95□□□□□ -1.46
USH1C-210ENST00000534556 MYL10Q9BUA6 226 aa5.95□□□□□ -1.46
USH1C-210ENST00000534556 LRRC2Q9BYS8 371 aa5.95□□□□□ -1.46
USH1C-210ENST00000534556 RNF41Q9H4P4 317 aaPredicted RBP5.95□□□□□ -1.46
USH1C-210ENST00000534556 JMJD4Q9H9V9 463 aa5.95□□□□□ -1.46
USH1C-210ENST00000534556 LY9Q9HBG7 655 aa5.95□□□□□ -1.46
USH1C-210ENST00000534556 CWC22Q9HCG8 908 aaKnown RBP5.95□□□□□ -1.46
USH1C-210ENST00000534556 PDGFCQ9NRA1 345 aa5.95□□□□□ -1.46
USH1C-210ENST00000534556 CYP39A1Q9NYL5 469 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms