RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 AP5Z1O43299 807 aa15.21■□□□□ 0.03
BEST1-208ENST00000534553 ZNF500O60304 480 aaPredicted RBP15.21■□□□□ 0.03
BEST1-208ENST00000534553 ZBTB7AO95365 584 aa15.21■□□□□ 0.03
BEST1-208ENST00000534553 MRPL12P52815 198 aaKnown RBP15.21■□□□□ 0.03
BEST1-208ENST00000534553 DHX8Q14562 1220 aaKnown RBP15.21■□□□□ 0.03
BEST1-208ENST00000534553 INF2Q27J81 1249 aa15.21■□□□□ 0.03
BEST1-208ENST00000534553 SLFN13Q68D06 897 aa15.21■□□□□ 0.03
BEST1-208ENST00000534553 CIAPIN1Q6FI81 312 aa15.21■□□□□ 0.03
BEST1-208ENST00000534553 RASGRP2Q7LDG7 609 aa15.21■□□□□ 0.03
BEST1-208ENST00000534553 RASGRP4Q8TDF6 673 aa15.21■□□□□ 0.03
BEST1-208ENST00000534553 ERCC4Q92889 916 aaPredicted RBP15.21■□□□□ 0.03
BEST1-208ENST00000534553 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.21■□□□□ 0.03
BEST1-208ENST00000534553 WNT7AO00755 349 aa15.2■□□□□ 0.02
BEST1-208ENST00000534553 MYL1P05976 194 aa15.2■□□□□ 0.02
BEST1-208ENST00000534553 SEPT2Q15019 361 aa15.2■□□□□ 0.02
BEST1-208ENST00000534553 SH3RF1Q7Z6J0 888 aa15.2■□□□□ 0.02
BEST1-208ENST00000534553 CLEC10AQ8IUN9 316 aa15.2■□□□□ 0.02
BEST1-208ENST00000534553 CUL5Q93034 780 aa15.2■□□□□ 0.02
BEST1-208ENST00000534553 EPSTI1Q96J88 318 aa15.2■□□□□ 0.02
BEST1-208ENST00000534553 GSDMAQ96QA5 445 aa15.2■□□□□ 0.02
BEST1-208ENST00000534553 CPVLQ9H3G5 476 aa15.2■□□□□ 0.02
BEST1-208ENST00000534553 ARHGEF10LQ9HCE6 1279 aa15.2■□□□□ 0.02
BEST1-208ENST00000534553 COL4A5P29400 1685 aa15.2■□□□□ 0.02
BEST1-208ENST00000534553 BIN1O00499 593 aa15.2■□□□□ 0.02
BEST1-208ENST00000534553 NEMFO60524 1076 aa15.2■□□□□ 0.02
BEST1-208ENST00000534553 TNNI2P48788 182 aa15.2■□□□□ 0.02
BEST1-208ENST00000534553 MYL5Q02045 173 aa15.2■□□□□ 0.02
BEST1-208ENST00000534553 PDILTQ8N807 584 aa15.2■□□□□ 0.02
BEST1-208ENST00000534553 DHX58Q96C10 678 aa15.2■□□□□ 0.02
BEST1-208ENST00000534553 CUEDC2Q9H467 287 aa15.2■□□□□ 0.02
BEST1-208ENST00000534553 MAGEF1Q9HAY2 307 aa15.2■□□□□ 0.02
BEST1-208ENST00000534553 OR52Z1P0C646 297 aa15.19■□□□□ 0.02
BEST1-208ENST00000534553 CXCL9Q07325 125 aa15.19■□□□□ 0.02
BEST1-208ENST00000534553 TNFAIP1Q13829 316 aa15.19■□□□□ 0.02
BEST1-208ENST00000534553 MORC3Q14149 939 aa15.19■□□□□ 0.02
BEST1-208ENST00000534553 USP49Q70CQ1 688 aa15.19■□□□□ 0.02
BEST1-208ENST00000534553 ZBED3Q96IU2 234 aaPredicted RBP15.19■□□□□ 0.02
BEST1-208ENST00000534553 CCSER1Q9C0I3 900 aa15.19■□□□□ 0.02
BEST1-208ENST00000534553 SH2D4AQ9H788 454 aa15.19■□□□□ 0.02
BEST1-208ENST00000534553 BRCA1P38398 1863 aaKnown RBP15.19■□□□□ 0.02
BEST1-208ENST00000534553 FER1L6Q2WGJ9 1857 aa15.19■□□□□ 0.02
BEST1-208ENST00000534553 TCP10L2B9ZVM9 353 aa15.18■□□□□ 0.02
BEST1-208ENST00000534553 F5H6K3 240 aa15.18■□□□□ 0.02
BEST1-208ENST00000534553 CCNT1O60563 726 aaKnown RBP15.18■□□□□ 0.02
BEST1-208ENST00000534553 GH2P01242 217 aa15.18■□□□□ 0.02
BEST1-208ENST00000534553 GCFC2P16383 781 aaKnown RBP15.18■□□□□ 0.02
BEST1-208ENST00000534553 KLRC3Q07444 240 aa15.18■□□□□ 0.02
BEST1-208ENST00000534553 E2F4Q16254 413 aa15.18■□□□□ 0.02
BEST1-208ENST00000534553 KCTD1Q719H9 257 aa15.18■□□□□ 0.02
BEST1-208ENST00000534553 TBCKQ8TEA7 893 aa15.18■□□□□ 0.02
BEST1-208ENST00000534553 RAB34Q9BZG1 259 aa15.18■□□□□ 0.02
BEST1-208ENST00000534553 MAN1B1Q9UKM7 699 aa15.18■□□□□ 0.02
BEST1-208ENST00000534553 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.17■□□□□ 0.02
BEST1-208ENST00000534553 FAM196BA6NMK8 535 aa15.17■□□□□ 0.02
BEST1-208ENST00000534553 ADAMTS3O15072 1205 aa15.17■□□□□ 0.02
BEST1-208ENST00000534553 UBA7P41226 1012 aa15.17■□□□□ 0.02
BEST1-208ENST00000534553 CLK2P49760 499 aaKnown RBP15.17■□□□□ 0.02
BEST1-208ENST00000534553 LETM2Q2VYF4 491 aa15.17■□□□□ 0.02
BEST1-208ENST00000534553 BTNL9Q6UXG8 535 aa15.17■□□□□ 0.02
BEST1-208ENST00000534553 DRC7Q8IY82 874 aa15.17■□□□□ 0.02
BEST1-208ENST00000534553 PAGE5Q96GU1 130 aa15.17■□□□□ 0.02
BEST1-208ENST00000534553 ATF5Q9Y2D1 282 aaPredicted RBP15.17■□□□□ 0.02
BEST1-208ENST00000534553 ZBTB12Q9Y330 459 aaPredicted RBP15.17■□□□□ 0.02
BEST1-208ENST00000534553 CNTNAP1P78357 1384 aa15.17■□□□□ 0.02
BEST1-208ENST00000534553 CLRN2A0PK11 232 aa15.17■□□□□ 0.02
BEST1-208ENST00000534553 GDF11O95390 407 aa15.17■□□□□ 0.02
BEST1-208ENST00000534553 BMP3P12645 472 aa15.17■□□□□ 0.02
BEST1-208ENST00000534553 ERCC5P28715 1186 aaPredicted RBP15.17■□□□□ 0.02
BEST1-208ENST00000534553 PPP4R3AQ6IN85 833 aa15.17■□□□□ 0.02
BEST1-208ENST00000534553 SIAH1Q8IUQ4 282 aa15.17■□□□□ 0.02
BEST1-208ENST00000534553 UPF1Q92900 1129 aaKnown RBP eCLIP15.17■□□□□ 0.02
BEST1-208ENST00000534553 COA7Q96BR5 231 aa15.17■□□□□ 0.02
BEST1-208ENST00000534553 GOPCQ9HD26 462 aa15.17■□□□□ 0.02
BEST1-208ENST00000534553 MYOZ2Q9NPC6 264 aa15.17■□□□□ 0.02
BEST1-208ENST00000534553 DISC1Q9NRI5 854 aa15.17■□□□□ 0.02
BEST1-208ENST00000534553 GINM1Q9NU53 330 aa15.17■□□□□ 0.02
BEST1-208ENST00000534553 RMND1Q9NWS8 449 aa15.17■□□□□ 0.02
BEST1-208ENST00000534553 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.17■□□□□ 0.02
BEST1-208ENST00000534553 A0A087X0B3 334 aa15.16■□□□□ 0.02
BEST1-208ENST00000534553 USP17L10C9JJH3 530 aa15.16■□□□□ 0.02
BEST1-208ENST00000534553 CBFA2T2O43439 604 aa15.16■□□□□ 0.02
BEST1-208ENST00000534553 NDUFB10O96000 172 aa15.16■□□□□ 0.02
BEST1-208ENST00000534553 ZNF280AP59817 542 aaPredicted RBP15.16■□□□□ 0.02
BEST1-208ENST00000534553 MAP3K10Q02779 954 aa15.16■□□□□ 0.02
BEST1-208ENST00000534553 DPYDQ12882 1025 aa15.16■□□□□ 0.02
BEST1-208ENST00000534553 AP3B2Q13367 1082 aa15.16■□□□□ 0.02
BEST1-208ENST00000534553 NCAPHQ15003 741 aa15.16■□□□□ 0.02
BEST1-208ENST00000534553 IL17AQ16552 155 aa15.16■□□□□ 0.02
BEST1-208ENST00000534553 TMEM266Q2M3C6 531 aa15.16■□□□□ 0.02
BEST1-208ENST00000534553 TTBK2Q6IQ55 1244 aa15.16■□□□□ 0.02
BEST1-208ENST00000534553 AMNQ9BXJ7 453 aa15.16■□□□□ 0.02
BEST1-208ENST00000534553 GTPBP4Q9BZE4 634 aaKnown RBP15.16■□□□□ 0.02
BEST1-208ENST00000534553 PSTPIP2Q9H939 334 aa15.16■□□□□ 0.02
BEST1-208ENST00000534553 VEZTQ9HBM0 779 aa15.16■□□□□ 0.02
BEST1-208ENST00000534553 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.16■□□□□ 0.02
BEST1-208ENST00000534553 IMPACTQ9P2X3 320 aa15.16■□□□□ 0.02
BEST1-208ENST00000534553 BIN2Q9UBW5 565 aaPredicted RBP15.16■□□□□ 0.02
BEST1-208ENST00000534553 TMX2Q9Y320 296 aa15.16■□□□□ 0.02
BEST1-208ENST00000534553 NFKBIEO00221 500 aa15.15■□□□□ 0.02
BEST1-208ENST00000534553 GTPBP6O43824 516 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms