RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 WDR44Q5JSH3 913 aa19.07■□□□□ 0.64
PHRF1-206ENST00000534320 DBNDD1Q9H9R9 158 aa19.07■□□□□ 0.64
PHRF1-206ENST00000534320 DNM2P50570 870 aa19.07■□□□□ 0.64
PHRF1-206ENST00000534320 ALDH8A1Q9H2A2 487 aaPredicted RBP19.07■□□□□ 0.64
PHRF1-206ENST00000534320 MAGEF1Q9HAY2 307 aa19.07■□□□□ 0.64
PHRF1-206ENST00000534320 MRPL11Q9Y3B7 192 aaKnown RBP19.07■□□□□ 0.64
PHRF1-206ENST00000534320 ERCC5P28715 1186 aaPredicted RBP19.06■□□□□ 0.64
PHRF1-206ENST00000534320 NCBP1Q09161 790 aaKnown RBP19.06■□□□□ 0.64
PHRF1-206ENST00000534320 CYB5R4Q7L1T6 521 aa19.06■□□□□ 0.64
PHRF1-206ENST00000534320 CELF1Q92879 486 aaKnown RBP19.06■□□□□ 0.64
PHRF1-206ENST00000534320 POLR2MP0CAP2 368 aa19.06■□□□□ 0.64
PHRF1-206ENST00000534320 TSGA10IPQ3SY00 556 aa19.06■□□□□ 0.64
PHRF1-206ENST00000534320 HDXQ7Z353 690 aa19.06■□□□□ 0.64
PHRF1-206ENST00000534320 GPIHBP1Q8IV16 184 aa19.06■□□□□ 0.64
PHRF1-206ENST00000534320 PLA2G12BQ9BX93 195 aa19.06■□□□□ 0.64
PHRF1-206ENST00000534320 REREQ9P2R6 1566 aa19.06■□□□□ 0.64
PHRF1-206ENST00000534320 HARSP12081 509 aaKnown RBP19.06■□□□□ 0.64
PHRF1-206ENST00000534320 KRT5P13647 590 aa19.06■□□□□ 0.64
PHRF1-206ENST00000534320 KLHL30Q0D2K2 578 aa19.06■□□□□ 0.64
PHRF1-206ENST00000534320 TBC1D9BQ66K14 1250 aa19.06■□□□□ 0.64
PHRF1-206ENST00000534320 RRAGAQ7L523 313 aa19.06■□□□□ 0.64
PHRF1-206ENST00000534320 NUCKS1Q9H1E3 243 aaKnown RBP19.06■□□□□ 0.64
PHRF1-206ENST00000534320 NRBP1Q9UHY1 535 aa19.06■□□□□ 0.64
PHRF1-206ENST00000534320 ZDHHC9Q9Y397 364 aa19.06■□□□□ 0.64
PHRF1-206ENST00000534320 PCDHB6Q9Y5E3 794 aa19.06■□□□□ 0.64
PHRF1-206ENST00000534320 SFMBT2Q5VUG0 894 aa19.06■□□□□ 0.64
PHRF1-206ENST00000534320 CCDC50Q8IVM0 306 aa19.06■□□□□ 0.64
PHRF1-206ENST00000534320 KIFAP3Q92845 792 aa19.06■□□□□ 0.64
PHRF1-206ENST00000534320 GPR101Q96P66 508 aaPredicted RBP19.06■□□□□ 0.64
PHRF1-206ENST00000534320 RIPOR2Q9Y4F9 1068 aa19.06■□□□□ 0.64
PHRF1-206ENST00000534320 PRKG1Q13976 671 aa19.05■□□□□ 0.64
PHRF1-206ENST00000534320 SCARF1Q14162 830 aa19.05■□□□□ 0.64
PHRF1-206ENST00000534320 ATP6V0A2Q9Y487 856 aa19.05■□□□□ 0.64
PHRF1-206ENST00000534320 SLFN14P0C7P3 912 aa19.05■□□□□ 0.64
PHRF1-206ENST00000534320 PIGSQ96S52 555 aa19.05■□□□□ 0.64
PHRF1-206ENST00000534320 CUEDC2Q9H467 287 aa19.05■□□□□ 0.64
PHRF1-206ENST00000534320 GJB4Q9NTQ9 266 aa19.05■□□□□ 0.64
PHRF1-206ENST00000534320 USP17L3A6NCW0 530 aa19.05■□□□□ 0.64
PHRF1-206ENST00000534320 USP17L4A6NCW7 530 aa19.05■□□□□ 0.64
PHRF1-206ENST00000534320 KIF3CO14782 793 aa19.05■□□□□ 0.64
PHRF1-206ENST00000534320 KIF4AO95239 1232 aa19.05■□□□□ 0.64
PHRF1-206ENST00000534320 USP17L1Q7RTZ2 530 aa19.05■□□□□ 0.64
PHRF1-206ENST00000534320 AMNQ9BXJ7 453 aa19.05■□□□□ 0.64
PHRF1-206ENST00000534320 STMN4Q9H169 189 aaPredicted RBP19.05■□□□□ 0.64
PHRF1-206ENST00000534320 SLC39A2Q9NP94 309 aa19.05■□□□□ 0.64
PHRF1-206ENST00000534320 NLRC4Q9NPP4 1024 aa19.05■□□□□ 0.64
PHRF1-206ENST00000534320 PYCARDQ9ULZ3 195 aa19.05■□□□□ 0.64
PHRF1-206ENST00000534320 SRPRBQ9Y5M8 271 aaKnown RBP19.05■□□□□ 0.64
PHRF1-206ENST00000534320 PRDX5P30044 214 aa19.05■□□□□ 0.64
PHRF1-206ENST00000534320 PANK4Q9NVE7 773 aa19.05■□□□□ 0.64
PHRF1-206ENST00000534320 STRN3Q13033 797 aa19.04■□□□□ 0.64
PHRF1-206ENST00000534320 TYW1BQ6NUM6 668 aa19.04■□□□□ 0.64
PHRF1-206ENST00000534320 CLEC17AQ6ZS10 378 aa19.04■□□□□ 0.64
PHRF1-206ENST00000534320 FNBP4Q8N3X1 1017 aaPredicted RBP19.04■□□□□ 0.64
PHRF1-206ENST00000534320 AK8Q96MA6 479 aa19.04■□□□□ 0.64
PHRF1-206ENST00000534320 DESI2Q9BSY9 194 aa19.04■□□□□ 0.64
PHRF1-206ENST00000534320 FOSP01100 380 aaPredicted RBP19.04■□□□□ 0.64
PHRF1-206ENST00000534320 NT5C2P49902 561 aa19.04■□□□□ 0.64
PHRF1-206ENST00000534320 ALX1Q15699 326 aa19.04■□□□□ 0.64
PHRF1-206ENST00000534320 MIER3Q7Z3K6 550 aa19.04■□□□□ 0.64
PHRF1-206ENST00000534320 MIPOL1Q8TD10 442 aa19.04■□□□□ 0.64
PHRF1-206ENST00000534320 STIM2Q9P246 746 aa19.04■□□□□ 0.64
PHRF1-206ENST00000534320 CEP170BQ9Y4F5 1589 aaPredicted RBP19.04■□□□□ 0.64
PHRF1-206ENST00000534320 DGKHQ86XP1 1220 aa19.04■□□□□ 0.64
PHRF1-206ENST00000534320 FERMT1Q9BQL6 677 aa19.04■□□□□ 0.64
PHRF1-206ENST00000534320 KCNQ2O43526 872 aa19.04■□□□□ 0.64
PHRF1-206ENST00000534320 PLEKHA8P1O95397 391 aa19.04■□□□□ 0.64
PHRF1-206ENST00000534320 U2AF2P26368 475 aaKnown RBP eCLIP19.04■□□□□ 0.64
PHRF1-206ENST00000534320 USP17L2Q6R6M4 530 aa19.04■□□□□ 0.64
PHRF1-206ENST00000534320 GRAMD1CQ8IYS0 662 aa19.04■□□□□ 0.64
PHRF1-206ENST00000534320 CSRNP1Q96S65 589 aa19.04■□□□□ 0.64
PHRF1-206ENST00000534320 PPP2R2CQ9Y2T4 447 aa19.04■□□□□ 0.64
PHRF1-206ENST00000534320 PPFIBP2Q8ND30 876 aa19.04■□□□□ 0.64
PHRF1-206ENST00000534320 COL3A1P02461 1466 aaPredicted RBP19.03■□□□□ 0.64
PHRF1-206ENST00000534320 CD163L1Q9NR16 1453 aa19.03■□□□□ 0.64
PHRF1-206ENST00000534320 hCG_1984214I3L0E3 225 aa19.03■□□□□ 0.64
PHRF1-206ENST00000534320 PDIA6Q15084 440 aa19.03■□□□□ 0.64
PHRF1-206ENST00000534320 TMED8Q6PL24 325 aaPredicted RBP19.03■□□□□ 0.64
PHRF1-206ENST00000534320 KCTD1Q719H9 257 aa19.03■□□□□ 0.64
PHRF1-206ENST00000534320 DPH6Q7L8W6 267 aa19.03■□□□□ 0.64
PHRF1-206ENST00000534320 ZNF713Q8N859 430 aaPredicted RBP19.03■□□□□ 0.64
PHRF1-206ENST00000534320 KANSL2Q9H9L4 492 aa19.03■□□□□ 0.64
PHRF1-206ENST00000534320 ALAS1P13196 640 aa19.03■□□□□ 0.64
PHRF1-206ENST00000534320 CDK8P49336 464 aa19.03■□□□□ 0.64
PHRF1-206ENST00000534320 B4GALNT4Q76KP1 1039 aa19.03■□□□□ 0.64
PHRF1-206ENST00000534320 GSTA5Q7RTV2 222 aa19.03■□□□□ 0.64
PHRF1-206ENST00000534320 POTEDQ86YR6 584 aa19.03■□□□□ 0.64
PHRF1-206ENST00000534320 ZBTB9Q96C00 473 aa19.03■□□□□ 0.64
PHRF1-206ENST00000534320 IFIH1Q9BYX4 1025 aaKnown RBP19.03■□□□□ 0.64
PHRF1-206ENST00000534320 MAN1B1Q9UKM7 699 aa19.03■□□□□ 0.64
PHRF1-206ENST00000534320 MTUS1Q9ULD2 1270 aa19.03■□□□□ 0.64
PHRF1-206ENST00000534320 PCDHB13Q9Y5F0 798 aa19.03■□□□□ 0.64
PHRF1-206ENST00000534320 TBCKQ8TEA7 893 aa19.03■□□□□ 0.64
PHRF1-206ENST00000534320 COA1Q9GZY4 146 aa19.03■□□□□ 0.64
PHRF1-206ENST00000534320 BCS1LQ9Y276 419 aa19.03■□□□□ 0.64
PHRF1-206ENST00000534320 NPR1P16066 1061 aa19.03■□□□□ 0.64
PHRF1-206ENST00000534320 CLNS1AP54105 237 aaKnown RBP19.03■□□□□ 0.64
PHRF1-206ENST00000534320 FAM26FQ5R3K3 315 aa19.03■□□□□ 0.64
PHRF1-206ENST00000534320 ZNF772Q68DY9 489 aaPredicted RBP19.03■□□□□ 0.64
PHRF1-206ENST00000534320 NLRX1Q86UT6 975 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms