RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 GJA9P57773 515 aa17.87■□□□□ 0.45
CTSB-230ENST00000534149 SBK1Q52WX2 424 aa17.87■□□□□ 0.45
CTSB-230ENST00000534149 GNASQ5JWF2 1037 aa17.87■□□□□ 0.45
CTSB-230ENST00000534149 RASIP1Q5U651 963 aa17.87■□□□□ 0.45
CTSB-230ENST00000534149 ZNF365Q70YC5 407 aa17.87■□□□□ 0.45
CTSB-230ENST00000534149 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.87■□□□□ 0.45
CTSB-230ENST00000534149 ARMCX2Q7L311 632 aa17.87■□□□□ 0.45
CTSB-230ENST00000534149 FAM126BQ8IXS8 530 aa17.87■□□□□ 0.45
CTSB-230ENST00000534149 TMEM199Q8N511 208 aa17.87■□□□□ 0.45
CTSB-230ENST00000534149 SLC38A10Q9HBR0 1119 aa17.87■□□□□ 0.45
CTSB-230ENST00000534149 DDX19BQ9UMR2 479 aa17.87■□□□□ 0.45
CTSB-230ENST00000534149 GBF1Q92538 1859 aa17.86■□□□□ 0.45
CTSB-230ENST00000534149 GSG1L2A8MUP6 293 aa17.86■□□□□ 0.45
CTSB-230ENST00000534149 TNFRSF10AO00220 468 aa17.86■□□□□ 0.45
CTSB-230ENST00000534149 MS4A1P11836 297 aa17.86■□□□□ 0.45
CTSB-230ENST00000534149 PSRC1Q6PGN9 363 aaPredicted RBP17.86■□□□□ 0.45
CTSB-230ENST00000534149 HOMER2Q9NSB8 354 aa17.86■□□□□ 0.45
CTSB-230ENST00000534149 IGKV6D-41A0A0C4DH26 115 aa17.85■□□□□ 0.45
CTSB-230ENST00000534149 CTAGE5O15320 804 aa17.85■□□□□ 0.45
CTSB-230ENST00000534149 TLR3O15455 904 aaKnown RBP17.85■□□□□ 0.45
CTSB-230ENST00000534149 SMARCA5O60264 1052 aaPredicted RBP17.85■□□□□ 0.45
CTSB-230ENST00000534149 PRDM1O75626 825 aa17.85■□□□□ 0.45
CTSB-230ENST00000534149 CYP2C18P33260 490 aa17.85■□□□□ 0.45
CTSB-230ENST00000534149 BEX3Q00994 111 aa17.85■□□□□ 0.45
CTSB-230ENST00000534149 CCDC144CPQ8IYA2 1237 aa17.85■□□□□ 0.45
CTSB-230ENST00000534149 LRRC47Q8N1G4 583 aaKnown RBP17.85■□□□□ 0.45
CTSB-230ENST00000534149 CHST13Q8NET6 341 aa17.85■□□□□ 0.45
CTSB-230ENST00000534149 KATNBL1Q9H079 304 aa17.85■□□□□ 0.45
CTSB-230ENST00000534149 FBXO40Q9UH90 709 aa17.85■□□□□ 0.45
CTSB-230ENST00000534149 FEM1BQ9UK73 627 aa17.85■□□□□ 0.45
CTSB-230ENST00000534149 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.84■□□□□ 0.45
CTSB-230ENST00000534149 CNTN2Q02246 1040 aa17.84■□□□□ 0.45
CTSB-230ENST00000534149 GIMAP6Q6P9H5 292 aa17.84■□□□□ 0.45
CTSB-230ENST00000534149 OSBP2Q969R2 916 aa17.84■□□□□ 0.45
CTSB-230ENST00000534149 CEP95Q96GE4 821 aa17.84■□□□□ 0.45
CTSB-230ENST00000534149 EPB41L4AQ9HCS5 686 aaPredicted RBP17.84■□□□□ 0.45
CTSB-230ENST00000534149 CXXC1Q9P0U4 656 aaPredicted RBP17.84■□□□□ 0.45
CTSB-230ENST00000534149 NCOR1O75376 2440 aa17.83■□□□□ 0.45
CTSB-230ENST00000534149 CHD7Q9P2D1 2997 aa17.83■□□□□ 0.45
CTSB-230ENST00000534149 ASTN1O14525 1302 aa17.83■□□□□ 0.44
CTSB-230ENST00000534149 CD4P01730 458 aa17.83■□□□□ 0.44
CTSB-230ENST00000534149 COL9A1P20849 921 aa17.83■□□□□ 0.44
CTSB-230ENST00000534149 ADGRE1Q14246 886 aa17.83■□□□□ 0.44
CTSB-230ENST00000534149 CCDC85BQ15834 202 aaPredicted RBP17.83■□□□□ 0.44
CTSB-230ENST00000534149 AKNAD1Q5T1N1 836 aa17.83■□□□□ 0.44
CTSB-230ENST00000534149 NOL8Q76FK4 1167 aaKnown RBP17.83■□□□□ 0.44
CTSB-230ENST00000534149 LRRCC1Q9C099 1032 aa17.83■□□□□ 0.44
CTSB-230ENST00000534149 NKX2-4Q9H2Z4 354 aa17.83■□□□□ 0.44
CTSB-230ENST00000534149 IL23AQ9NPF7 189 aa17.83■□□□□ 0.44
CTSB-230ENST00000534149 MTMR4Q9NYA4 1195 aa17.83■□□□□ 0.44
CTSB-230ENST00000534149 THEGQ9P2T0 379 aa17.83■□□□□ 0.44
CTSB-230ENST00000534149 MSRAQ9UJ68 235 aa17.83■□□□□ 0.44
CTSB-230ENST00000534149 ISY1Q9ULR0 285 aaKnown RBP17.83■□□□□ 0.44
CTSB-230ENST00000534149 LRRC37A2A6NM11 1700 aa17.83■□□□□ 0.44
CTSB-230ENST00000534149 UMODL1Q5DID0 1318 aa17.82■□□□□ 0.44
CTSB-230ENST00000534149 IGFBP4P22692 258 aa17.82■□□□□ 0.44
CTSB-230ENST00000534149 PTGS1P23219 599 aa17.82■□□□□ 0.44
CTSB-230ENST00000534149 TDO2P48775 406 aa17.82■□□□□ 0.44
CTSB-230ENST00000534149 OAZ1P54368 228 aa17.82■□□□□ 0.44
CTSB-230ENST00000534149 RAB30Q15771 203 aa17.82■□□□□ 0.44
CTSB-230ENST00000534149 CXCL17Q6UXB2 119 aa17.82■□□□□ 0.44
CTSB-230ENST00000534149 ZNF444Q8N0Y2 327 aaPredicted RBP17.82■□□□□ 0.44
CTSB-230ENST00000534149 ATXN2LQ8WWM7 1075 aaKnown RBP17.82■□□□□ 0.44
CTSB-230ENST00000534149 HERVK_113Q902F9 699 aa17.82■□□□□ 0.44
CTSB-230ENST00000534149 MKL1Q969V6 931 aa17.82■□□□□ 0.44
CTSB-230ENST00000534149 GPAA1O43292 621 aa17.81■□□□□ 0.44
CTSB-230ENST00000534149 TTLL1O95922 423 aa17.81■□□□□ 0.44
CTSB-230ENST00000534149 BMP3P12645 472 aa17.81■□□□□ 0.44
CTSB-230ENST00000534149 NKX3-2P78367 333 aa17.81■□□□□ 0.44
CTSB-230ENST00000534149 TNFAIP2Q03169 654 aa17.81■□□□□ 0.44
CTSB-230ENST00000534149 SLFN13Q68D06 897 aa17.81■□□□□ 0.44
CTSB-230ENST00000534149 TLK2Q86UE8 772 aa17.81■□□□□ 0.44
CTSB-230ENST00000534149 FAM133AQ8N9E0 248 aa17.81■□□□□ 0.44
CTSB-230ENST00000534149 KBTBD3Q8NAB2 608 aa17.81■□□□□ 0.44
CTSB-230ENST00000534149 GMCL1P1Q8NEA9 526 aa17.81■□□□□ 0.44
CTSB-230ENST00000534149 APPBP2Q92624 585 aa17.81■□□□□ 0.44
CTSB-230ENST00000534149 CHMP4CQ96CF2 233 aa17.81■□□□□ 0.44
CTSB-230ENST00000534149 ASB2Q96Q27 587 aa17.81■□□□□ 0.44
CTSB-230ENST00000534149 HIPK3Q9H422 1215 aa17.81■□□□□ 0.44
CTSB-230ENST00000534149 ACAD9Q9H845 621 aa17.81■□□□□ 0.44
CTSB-230ENST00000534149 A1CFQ9NQ94 594 aaKnown RBP17.81■□□□□ 0.44
CTSB-230ENST00000534149 ECHDC1Q9NTX5 307 aa17.81■□□□□ 0.44
CTSB-230ENST00000534149 YBX2Q9Y2T7 364 aaKnown RBP17.81■□□□□ 0.44
CTSB-230ENST00000534149 DDX49Q9Y6V7 483 aaKnown RBP17.81■□□□□ 0.44
CTSB-230ENST00000534149 SOWAHBA6NEL2 793 aa17.8■□□□□ 0.44
CTSB-230ENST00000534149 TMEM232C9JQI7 657 aa17.8■□□□□ 0.44
CTSB-230ENST00000534149 FGBP02675 491 aa17.8■□□□□ 0.44
CTSB-230ENST00000534149 TSHZ3Q63HK5 1081 aa17.8■□□□□ 0.44
CTSB-230ENST00000534149 OTOP2Q7RTS6 562 aa17.8■□□□□ 0.44
CTSB-230ENST00000534149 SLC43A3Q8NBI5 491 aa17.8■□□□□ 0.44
CTSB-230ENST00000534149 ADAMTS19Q8TE59 1207 aa17.8■□□□□ 0.44
CTSB-230ENST00000534149 AGBL1Q96MI9 1066 aa17.8■□□□□ 0.44
CTSB-230ENST00000534149 MTIF3Q9H2K0 278 aaKnown RBP17.8■□□□□ 0.44
CTSB-230ENST00000534149 ZNF287Q9HBT7 754 aa17.8■□□□□ 0.44
CTSB-230ENST00000534149 RNF146Q9NTX7 359 aa17.8■□□□□ 0.44
CTSB-230ENST00000534149 RAPGEFL1Q9UHV5 662 aa17.8■□□□□ 0.44
CTSB-230ENST00000534149 SYNPO2Q9UMS6 1093 aa17.8■□□□□ 0.44
CTSB-230ENST00000534149 GNEQ9Y223 722 aaKnown RBP17.8■□□□□ 0.44
CTSB-230ENST00000534149 M0R2C6 588 aa17.79■□□□□ 0.44
CTSB-230ENST00000534149 RNF113AO15541 343 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms