RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 OTUD7AQ8TE49 926 aaPredicted RBP20.04■□□□□ 0.8
CAPRIN1-216ENST00000534042 CHURC1Q8WUH1 139 aa20.04■□□□□ 0.8
CAPRIN1-216ENST00000534042 RNPC3Q96LT9 517 aaKnown RBP20.04■□□□□ 0.8
CAPRIN1-216ENST00000534042 FGD4Q96M96 766 aa20.04■□□□□ 0.8
CAPRIN1-216ENST00000534042 HOMER2Q9NSB8 354 aa20.04■□□□□ 0.8
CAPRIN1-216ENST00000534042 PCDHB15Q9Y5E8 787 aa20.04■□□□□ 0.8
CAPRIN1-216ENST00000534042 MYADML2A6NDP7 307 aa20.03■□□□□ 0.8
CAPRIN1-216ENST00000534042 C6orf222P0C671 652 aaPredicted RBP20.03■□□□□ 0.8
CAPRIN1-216ENST00000534042 CST5P28325 142 aaPredicted RBP20.03■□□□□ 0.8
CAPRIN1-216ENST00000534042 STAT2P52630 851 aa20.03■□□□□ 0.8
CAPRIN1-216ENST00000534042 FPGSQ05932 587 aa20.03■□□□□ 0.8
CAPRIN1-216ENST00000534042 FAAP100Q0VG06 881 aa20.03■□□□□ 0.8
CAPRIN1-216ENST00000534042 IKQ13123 557 aaPredicted RBP20.03■□□□□ 0.8
CAPRIN1-216ENST00000534042 CCDC144BQ3MJ40 725 aa20.03■□□□□ 0.8
CAPRIN1-216ENST00000534042 PPP4R3BQ5MIZ7 849 aa20.03■□□□□ 0.8
CAPRIN1-216ENST00000534042 CCSAPQ6IQ19 270 aaPredicted RBP20.03■□□□□ 0.8
CAPRIN1-216ENST00000534042 FAM160B2Q86V87 743 aa20.03■□□□□ 0.8
CAPRIN1-216ENST00000534042 PCSK9Q8NBP7 692 aaKnown RBP20.03■□□□□ 0.8
CAPRIN1-216ENST00000534042 GLT1D1Q96MS3 346 aa20.03■□□□□ 0.8
CAPRIN1-216ENST00000534042 CDX2Q99626 313 aaPredicted RBP20.03■□□□□ 0.8
CAPRIN1-216ENST00000534042 MYO9BQ13459 2157 aa20.02■□□□□ 0.8
CAPRIN1-216ENST00000534042 SLC1A4P43007 532 aa20.02■□□□□ 0.8
CAPRIN1-216ENST00000534042 EPHB4P54760 987 aa20.02■□□□□ 0.8
CAPRIN1-216ENST00000534042 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.02■□□□□ 0.8
CAPRIN1-216ENST00000534042 STAG1Q8WVM7 1258 aa20.02■□□□□ 0.8
CAPRIN1-216ENST00000534042 VTI1AQ96AJ9 217 aa20.02■□□□□ 0.8
CAPRIN1-216ENST00000534042 GMCL1Q96IK5 515 aa20.02■□□□□ 0.8
CAPRIN1-216ENST00000534042 ACAD9Q9H845 621 aa20.02■□□□□ 0.8
CAPRIN1-216ENST00000534042 ELP1O95163 1332 aa20.02■□□□□ 0.79
CAPRIN1-216ENST00000534042 ADCY6O43306 1168 aa20.01■□□□□ 0.79
CAPRIN1-216ENST00000534042 MX1P20591 662 aa20.01■□□□□ 0.79
CAPRIN1-216ENST00000534042 MCCP23508 829 aa20.01■□□□□ 0.79
CAPRIN1-216ENST00000534042 GJA9P57773 515 aa20.01■□□□□ 0.79
CAPRIN1-216ENST00000534042 CCDC144CPQ8IYA2 1237 aa20.01■□□□□ 0.79
CAPRIN1-216ENST00000534042 CHMP4CQ96CF2 233 aa20.01■□□□□ 0.79
CAPRIN1-216ENST00000534042 UPF3AQ9H1J1 476 aaKnown RBP20.01■□□□□ 0.79
CAPRIN1-216ENST00000534042 RNF146Q9NTX7 359 aa20.01■□□□□ 0.79
CAPRIN1-216ENST00000534042 ZBTB47Q9UFB7 747 aaPredicted RBP20.01■□□□□ 0.79
CAPRIN1-216ENST00000534042 STX8Q9UNK0 236 aa20.01■□□□□ 0.79
CAPRIN1-216ENST00000534042 LAMA2P24043 3122 aaKnown RBP20.01■□□□□ 0.79
CAPRIN1-216ENST00000534042 MROH7Q68CQ1 1323 aa20.01■□□□□ 0.79
CAPRIN1-216ENST00000534042 TSPY2A6NKD2 308 aa20■□□□□ 0.79
CAPRIN1-216ENST00000534042 ASGR1P07306 291 aa20■□□□□ 0.79
CAPRIN1-216ENST00000534042 IRX5P78411 483 aaPredicted RBP20■□□□□ 0.79
CAPRIN1-216ENST00000534042 CNTN2Q02246 1040 aa20■□□□□ 0.79
CAPRIN1-216ENST00000534042 TKFCQ3LXA3 575 aa20■□□□□ 0.79
CAPRIN1-216ENST00000534042 GNASQ5JWF2 1037 aa20■□□□□ 0.79
CAPRIN1-216ENST00000534042 FAM133AQ8N9E0 248 aa20■□□□□ 0.79
CAPRIN1-216ENST00000534042 AGBL1Q96MI9 1066 aa20■□□□□ 0.79
CAPRIN1-216ENST00000534042 TTYH1Q9H313 450 aaPredicted RBP20■□□□□ 0.79
CAPRIN1-216ENST00000534042 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20■□□□□ 0.79
CAPRIN1-216ENST00000534042 PLA2G6O60733 806 aa19.99■□□□□ 0.79
CAPRIN1-216ENST00000534042 TIMP1P01033 207 aa19.99■□□□□ 0.79
CAPRIN1-216ENST00000534042 CTDSPL2Q05D32 466 aa19.99■□□□□ 0.79
CAPRIN1-216ENST00000534042 RCSD1Q6JBY9 416 aa19.99■□□□□ 0.79
CAPRIN1-216ENST00000534042 CCDC129Q6ZRS4 1044 aa19.99■□□□□ 0.79
CAPRIN1-216ENST00000534042 A1CFQ9NQ94 594 aaKnown RBP19.99■□□□□ 0.79
CAPRIN1-216ENST00000534042 TBX21Q9UL17 535 aa19.99■□□□□ 0.79
CAPRIN1-216ENST00000534042 ZNF536O15090 1300 aa19.99■□□□□ 0.79
CAPRIN1-216ENST00000534042 A0A0U1RQG5 324 aaPredicted RBP19.98■□□□□ 0.79
CAPRIN1-216ENST00000534042 ASB14A6NK59 587 aa19.98■□□□□ 0.79
CAPRIN1-216ENST00000534042 ALAS1P13196 640 aa19.98■□□□□ 0.79
CAPRIN1-216ENST00000534042 CDK7P50613 346 aa19.98■□□□□ 0.79
CAPRIN1-216ENST00000534042 KCTD1Q719H9 257 aa19.98■□□□□ 0.79
CAPRIN1-216ENST00000534042 NOL8Q76FK4 1167 aaKnown RBP19.98■□□□□ 0.79
CAPRIN1-216ENST00000534042 MAFAQ8NHW3 353 aaPredicted RBP19.98■□□□□ 0.79
CAPRIN1-216ENST00000534042 MYLIPQ8WY64 445 aa19.98■□□□□ 0.79
CAPRIN1-216ENST00000534042 TRERF1Q96PN7 1200 aa19.98■□□□□ 0.79
CAPRIN1-216ENST00000534042 KATNBL1Q9H079 304 aa19.98■□□□□ 0.79
CAPRIN1-216ENST00000534042 INCENPQ9NQS7 918 aa19.98■□□□□ 0.79
CAPRIN1-216ENST00000534042 TMEM265A0A087WTH1 108 aa19.97■□□□□ 0.79
CAPRIN1-216ENST00000534042 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.97■□□□□ 0.79
CAPRIN1-216ENST00000534042 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.97■□□□□ 0.79
CAPRIN1-216ENST00000534042 SOWAHBA6NEL2 793 aa19.97■□□□□ 0.79
CAPRIN1-216ENST00000534042 ARVCFO00192 962 aa19.97■□□□□ 0.79
CAPRIN1-216ENST00000534042 FOXP2O15409 715 aa19.97■□□□□ 0.79
CAPRIN1-216ENST00000534042 RANBP6O60518 1105 aaKnown RBP19.97■□□□□ 0.79
CAPRIN1-216ENST00000534042 TNFAIP2Q03169 654 aa19.97■□□□□ 0.79
CAPRIN1-216ENST00000534042 MFSD5Q6N075 450 aa19.97■□□□□ 0.79
CAPRIN1-216ENST00000534042 CCDC174Q6PII3 467 aa19.97■□□□□ 0.79
CAPRIN1-216ENST00000534042 IL17RBQ9NRM6 502 aa19.97■□□□□ 0.79
CAPRIN1-216ENST00000534042 TLR3O15455 904 aaKnown RBP19.96■□□□□ 0.79
CAPRIN1-216ENST00000534042 NMT2O60551 498 aa19.96■□□□□ 0.79
CAPRIN1-216ENST00000534042 SNAP25P60880 206 aa19.96■□□□□ 0.79
CAPRIN1-216ENST00000534042 NKX3-2P78367 333 aa19.96■□□□□ 0.79
CAPRIN1-216ENST00000534042 PPIGQ13427 754 aaKnown RBP eCLIP19.96■□□□□ 0.79
CAPRIN1-216ENST00000534042 ANKRD45Q5TZF3 282 aa19.96■□□□□ 0.79
CAPRIN1-216ENST00000534042 EVI5LQ96CN4 794 aa19.96■□□□□ 0.79
CAPRIN1-216ENST00000534042 COL25A1Q9BXS0 654 aaPredicted RBP19.96■□□□□ 0.79
CAPRIN1-216ENST00000534042 PRR12Q9ULL5 1215 aa19.96■□□□□ 0.79
CAPRIN1-216ENST00000534042 MTMR7Q9Y216 660 aa19.96■□□□□ 0.79
CAPRIN1-216ENST00000534042 SALL3Q9BXA9 1300 aa19.96■□□□□ 0.79
CAPRIN1-216ENST00000534042 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.95■□□□□ 0.78
CAPRIN1-216ENST00000534042 CTAGE5O15320 804 aa19.95■□□□□ 0.78
CAPRIN1-216ENST00000534042 FOSL2P15408 326 aa19.95■□□□□ 0.78
CAPRIN1-216ENST00000534042 BEX3Q00994 111 aa19.95■□□□□ 0.78
CAPRIN1-216ENST00000534042 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.95■□□□□ 0.781e-8■□□□□ 10.6
CAPRIN1-216ENST00000534042 ANAPC4Q9UJX5 808 aa19.95■□□□□ 0.78
CAPRIN1-216ENST00000534042 ORC4O43929 436 aa19.94■□□□□ 0.78
CAPRIN1-216ENST00000534042 CCDC96Q2M329 555 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms