RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	ABCC9	O60706	1549 aa		7.06	□□□□□ -1.28
ATM-223	ENST00000533979	C1QTNF9	P0C862	333 aa		7.05	□□□□□ -1.28
ATM-223	ENST00000533979	BRF1	Q92994	677 aa		7.05	□□□□□ -1.28
ATM-223	ENST00000533979	SLC12A9	Q9BXP2	914 aa		7.05	□□□□□ -1.28
ATM-223	ENST00000533979	SF3B6	Q9Y3B4	125 aa	Known RBP	7.05	□□□□□ -1.28
ATM-223	ENST00000533979	USP2	O75604	605 aa	Predicted RBP	7.04	□□□□□ -1.28
ATM-223	ENST00000533979	MED14OS	P0DP75	135 aa		7.04	□□□□□ -1.28
ATM-223	ENST00000533979	ITGA4	P13612	1032 aa		7.04	□□□□□ -1.28
ATM-223	ENST00000533979	ATF4	P18848	351 aa	Predicted RBP	7.04	□□□□□ -1.28
ATM-223	ENST00000533979	GLDC	P23378	1020 aa		7.04	□□□□□ -1.28
ATM-223	ENST00000533979	PDE6B	P35913	854 aa		7.04	□□□□□ -1.28
ATM-223	ENST00000533979	SLC7A5	Q01650	507 aa		7.04	□□□□□ -1.28
ATM-223	ENST00000533979	POU4F1	Q01851	419 aa		7.04	□□□□□ -1.28
ATM-223	ENST00000533979	KRTAP19-4	Q3LI73	84 aa		7.04	□□□□□ -1.28
ATM-223	ENST00000533979	RTP2	Q5QGT7	225 aa		7.04	□□□□□ -1.28
ATM-223	ENST00000533979	HLA-DQA1	Q5Y7H0	255 aa		7.04	□□□□□ -1.28
ATM-223	ENST00000533979	CILP2	Q8IUL8	1156 aa		7.04	□□□□□ -1.28
ATM-223	ENST00000533979	SIRT2	Q8IXJ6	389 aa		7.04	□□□□□ -1.28
ATM-223	ENST00000533979	CDADC1	Q9BWV3	514 aa		7.04	□□□□□ -1.28
ATM-223	ENST00000533979	KRTAP9-9	Q9BYP9	154 aa		7.04	□□□□□ -1.28
ATM-223	ENST00000533979	KRTAP9-4	Q9BYQ2	154 aa		7.04	□□□□□ -1.28
ATM-223	ENST00000533979	CCSER2	Q9H7U1	834 aa		7.04	□□□□□ -1.28
ATM-223	ENST00000533979	AP5S1	Q9NUS5	200 aa		7.04	□□□□□ -1.28
ATM-223	ENST00000533979	ERVK13-1	Q9NX77	482 aa		7.04	□□□□□ -1.28
ATM-223	ENST00000533979	ARID1B	Q8NFD5	2236 aa	Predicted RBP	7.03	□□□□□ -1.28
ATM-223	ENST00000533979	OR14I1	A6ND48	311 aa		7.03	□□□□□ -1.28
ATM-223	ENST00000533979	ETV2	O00321	342 aa	Predicted RBP	7.03	□□□□□ -1.28
ATM-223	ENST00000533979	GSTM1	P09488	218 aa		7.03	□□□□□ -1.28
ATM-223	ENST00000533979	LAPTM5	Q13571	262 aa		7.03	□□□□□ -1.28
ATM-223	ENST00000533979	PPP2R5E	Q16537	467 aa		7.03	□□□□□ -1.28
ATM-223	ENST00000533979	HEATR6	Q6AI08	1181 aa	Known RBP	7.03	□□□□□ -1.28
ATM-223	ENST00000533979	CRTC3	Q6UUV7	619 aa		7.03	□□□□□ -1.28
ATM-223	ENST00000533979	FIBCD1	Q8N539	461 aa		7.03	□□□□□ -1.28
ATM-223	ENST00000533979	TOX2	Q96NM4	488 aa		7.03	□□□□□ -1.28
ATM-223	ENST00000533979	FCRL3	Q96P31	734 aa	Predicted RBP	7.03	□□□□□ -1.28
ATM-223	ENST00000533979	WHRN	Q9P202	907 aa		7.03	□□□□□ -1.28
ATM-223	ENST00000533979	ACSL6	Q9UKU0	697 aa		7.03	□□□□□ -1.28
ATM-223	ENST00000533979	TEX51	A0A1B0GUA7	166 aa		7.02	□□□□□ -1.29
ATM-223	ENST00000533979	MYOCOS	A0A1B0GUC4	107 aa		7.02	□□□□□ -1.29
ATM-223	ENST00000533979	HRK	O00198	91 aa		7.02	□□□□□ -1.29
ATM-223	ENST00000533979	CBFA2T2	O43439	604 aa		7.02	□□□□□ -1.29
ATM-223	ENST00000533979	EFEMP2	O95967	443 aa		7.02	□□□□□ -1.29
ATM-223	ENST00000533979	CEBPA	P49715	358 aa	Predicted RBP	7.02	□□□□□ -1.29
ATM-223	ENST00000533979	HSF5	Q4G112	596 aa	Predicted RBP	7.02	□□□□□ -1.29
ATM-223	ENST00000533979	SLCO6A1	Q86UG4	719 aa		7.02	□□□□□ -1.29
ATM-223	ENST00000533979	FAM177A1	Q8N128	213 aa	Predicted RBP	7.02	□□□□□ -1.29
ATM-223	ENST00000533979	RCC1L	Q96I51	464 aa	Known RBP	7.02	□□□□□ -1.29
ATM-223	ENST00000533979	HAUS7	Q99871	368 aa		7.02	□□□□□ -1.29
ATM-223	ENST00000533979	PLCD4	Q9BRC7	762 aa		7.02	□□□□□ -1.29
ATM-223	ENST00000533979	MCOLN1	Q9GZU1	580 aa		7.02	□□□□□ -1.29
ATM-223	ENST00000533979		H0Y8X5	98 aa		7.01	□□□□□ -1.29
ATM-223	ENST00000533979	ABLIM1	O14639	778 aa		7.01	□□□□□ -1.29
ATM-223	ENST00000533979	PPM1B	O75688	479 aa		7.01	□□□□□ -1.29
ATM-223	ENST00000533979	CFP	P27918	469 aa		7.01	□□□□□ -1.29
ATM-223	ENST00000533979	ERCC5	P28715	1186 aa	Predicted RBP	7.01	□□□□□ -1.29
ATM-223	ENST00000533979	GALK1	P51570	392 aa		7.01	□□□□□ -1.29
ATM-223	ENST00000533979	ERVFRD-1	P60508	538 aa		7.01	□□□□□ -1.29
ATM-223	ENST00000533979	YBX1	P67809	324 aa	Known RBP	7.01	□□□□□ -1.29
ATM-223	ENST00000533979	CYP4F8	P98187	520 aa		7.01	□□□□□ -1.29
ATM-223	ENST00000533979	TMEM132E	Q6IEE7	984 aa		7.01	□□□□□ -1.29
ATM-223	ENST00000533979	ATG14	Q6ZNE5	492 aa		7.01	□□□□□ -1.29
ATM-223	ENST00000533979	ZNF605	Q86T29	641 aa		7.01	□□□□□ -1.29
ATM-223	ENST00000533979	ARHGEF39	Q8N4T4	335 aa		7.01	□□□□□ -1.29
ATM-223	ENST00000533979	NLGN2	Q8NFZ4	835 aa		7.01	□□□□□ -1.29
ATM-223	ENST00000533979	KLHL25	Q9H0H3	589 aa		7.01	□□□□□ -1.29
ATM-223	ENST00000533979	FAM86C1	Q9NVL1	165 aa		7.01	□□□□□ -1.29
ATM-223	ENST00000533979	PCDHB10	Q9UN67	800 aa		7.01	□□□□□ -1.29
ATM-223	ENST00000533979	SMG5	Q9UPR3	1016 aa	Known RBP	7.01	□□□□□ -1.29
ATM-223	ENST00000533979	SEMA7A	O75326	666 aa		7	□□□□□ -1.29
ATM-223	ENST00000533979	TBC1D8	O95759	1140 aa		7	□□□□□ -1.29
ATM-223	ENST00000533979	MPO	P05164	745 aa		7	□□□□□ -1.29
ATM-223	ENST00000533979	TCF3	P15923	654 aa		7	□□□□□ -1.29
ATM-223	ENST00000533979	ARL4A	P40617	200 aa		7	□□□□□ -1.29
ATM-223	ENST00000533979	DLG4	P78352	724 aa		7	□□□□□ -1.29
ATM-223	ENST00000533979	ADGRF1	Q5T601	910 aa		7	□□□□□ -1.29
ATM-223	ENST00000533979	ADAT2	Q7Z6V5	191 aa	Known RBP	7	□□□□□ -1.29
ATM-223	ENST00000533979	SIAH1	Q8IUQ4	282 aa		7	□□□□□ -1.29
ATM-223	ENST00000533979	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	7	□□□□□ -1.29
ATM-223	ENST00000533979	KLHL6	Q8WZ60	621 aa		7	□□□□□ -1.29
ATM-223	ENST00000533979	GBP3	Q9H0R5	595 aa		7	□□□□□ -1.29
ATM-223	ENST00000533979	NOL6	Q9H6R4	1146 aa	Known RBP	7	□□□□□ -1.29
ATM-223	ENST00000533979	GPR55	Q9Y2T6	319 aa	Predicted RBP	7	□□□□□ -1.29
ATM-223	ENST00000533979	TAF6L	Q9Y6J9	622 aa		7	□□□□□ -1.29
ATM-223	ENST00000533979	FGF10	O15520	208 aa	Predicted RBP	6.99	□□□□□ -1.29
ATM-223	ENST00000533979	PRKCA	P17252	672 aa		6.99	□□□□□ -1.29
ATM-223	ENST00000533979	GNL2	Q13823	731 aa	Known RBP	6.99	□□□□□ -1.29
ATM-223	ENST00000533979	KIAA1211L	Q6NV74	962 aa		6.99	□□□□□ -1.29
ATM-223	ENST00000533979	AMIGO3	Q86WK7	504 aa		6.99	□□□□□ -1.29
ATM-223	ENST00000533979	FAM169B	Q8N8A8	192 aa		6.99	□□□□□ -1.29
ATM-223	ENST00000533979	APBA2	Q99767	749 aa		6.99	□□□□□ -1.29
ATM-223	ENST00000533979	CAPN10	Q9HC96	672 aa		6.99	□□□□□ -1.29
ATM-223	ENST00000533979	CD320	Q9NPF0	282 aa		6.99	□□□□□ -1.29
ATM-223	ENST00000533979	TCAF2	A6NFQ2	919 aa		6.98	□□□□□ -1.29
ATM-223	ENST00000533979	EPHX1	P07099	455 aa		6.98	□□□□□ -1.29
ATM-223	ENST00000533979	PPP2R5D	Q14738	602 aa		6.98	□□□□□ -1.29
ATM-223	ENST00000533979	CBX2	Q14781	532 aa	Predicted RBP	6.98	□□□□□ -1.29
ATM-223	ENST00000533979	KCNA10	Q16322	511 aa		6.98	□□□□□ -1.29
ATM-223	ENST00000533979	CYP2R1	Q6VVX0	501 aa		6.98	□□□□□ -1.29
ATM-223	ENST00000533979	NAT16	Q8N8M0	369 aa		6.98	□□□□□ -1.29
ATM-223	ENST00000533979	PTCHD1	Q96NR3	888 aa		6.98	□□□□□ -1.29

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