RNA–Protein interactions for RNA: ENST00000533682.1

CLP1-205, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 2,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-205ENST00000533682 MORC2Q9Y6X9 1032 aaPredicted RBP13.56□□□□□ -0.24
CLP1-205ENST00000533682 COL4A5P29400 1685 aa13.56□□□□□ -0.24
CLP1-205ENST00000533682 CLRN2A0PK11 232 aa13.55□□□□□ -0.24
CLP1-205ENST00000533682 SMTNL1A8MU46 457 aa13.55□□□□□ -0.24
CLP1-205ENST00000533682 USP17L10C9JJH3 530 aa13.55□□□□□ -0.24
CLP1-205ENST00000533682 CCNT1O60563 726 aaKnown RBP13.55□□□□□ -0.24
CLP1-205ENST00000533682 CD44P16070 742 aaKnown RBP13.55□□□□□ -0.24
CLP1-205ENST00000533682 CCDC96Q2M329 555 aa13.55□□□□□ -0.24
CLP1-205ENST00000533682 LRRC8AQ8IWT6 810 aa13.55□□□□□ -0.24
CLP1-205ENST00000533682 MRIQ9BWK5 157 aa13.55□□□□□ -0.24
CLP1-205ENST00000533682 DPYDQ12882 1025 aa13.55□□□□□ -0.24
CLP1-205ENST00000533682 CUL4BQ13620 913 aa13.55□□□□□ -0.24
CLP1-205ENST00000533682 KLHL10Q6JEL2 608 aa13.55□□□□□ -0.24
CLP1-205ENST00000533682 TBCKQ8TEA7 893 aa13.55□□□□□ -0.24
CLP1-205ENST00000533682 LRRC15Q8TF66 581 aa13.55□□□□□ -0.24
CLP1-205ENST00000533682 BBXQ8WY36 941 aaPredicted RBP13.55□□□□□ -0.24
CLP1-205ENST00000533682 C6orf50Q9HD87 102 aa13.55□□□□□ -0.24
CLP1-205ENST00000533682 SCAF8Q9UPN6 1271 aaKnown RBP13.55□□□□□ -0.24
CLP1-205ENST00000533682 TCP10L2B9ZVM9 353 aa13.54□□□□□ -0.24
CLP1-205ENST00000533682 PSMD14O00487 310 aa13.54□□□□□ -0.24
CLP1-205ENST00000533682 EDIL3O43854 480 aa13.54□□□□□ -0.24
CLP1-205ENST00000533682 SNAP25P60880 206 aa13.54□□□□□ -0.24
CLP1-205ENST00000533682 FKBP1AP62942 108 aaKnown RBP13.54□□□□□ -0.24
CLP1-205ENST00000533682 ASPRV1Q53RT3 343 aa13.54□□□□□ -0.24
CLP1-205ENST00000533682 DNTTIP2Q5QJE6 756 aaKnown RBP13.54□□□□□ -0.24
CLP1-205ENST00000533682 SOGA3Q5TF21 947 aa13.54□□□□□ -0.24
CLP1-205ENST00000533682 GALNT17Q6IS24 598 aa13.54□□□□□ -0.24
CLP1-205ENST00000533682 KANK3Q6NY19 840 aa13.54□□□□□ -0.24
CLP1-205ENST00000533682 PDXDC2PQ6P474 469 aa13.54□□□□□ -0.24
CLP1-205ENST00000533682 DTHD1Q6ZMT9 781 aa13.54□□□□□ -0.24
CLP1-205ENST00000533682 TMC6Q7Z403 805 aa13.54□□□□□ -0.24
CLP1-205ENST00000533682 NUP88Q99567 741 aaPredicted RBP13.54□□□□□ -0.24
CLP1-205ENST00000533682 EHD4Q9H223 541 aa13.54□□□□□ -0.24
CLP1-205ENST00000533682 SMCHD1A6NHR9 2005 aa13.54□□□□□ -0.24
CLP1-205ENST00000533682 TMEM232C9JQI7 657 aa13.54□□□□□ -0.24
CLP1-205ENST00000533682 TPM3P06753 285 aa13.54□□□□□ -0.24
CLP1-205ENST00000533682 STX17P56962 302 aa13.54□□□□□ -0.24
CLP1-205ENST00000533682 HDLBPQ00341 1268 aaKnown RBP13.54□□□□□ -0.24
CLP1-205ENST00000533682 UBE2SQ16763 222 aa13.54□□□□□ -0.24
CLP1-205ENST00000533682 ARL6IP4Q66PJ3 421 aaKnown RBP13.54□□□□□ -0.24
CLP1-205ENST00000533682 CDAN1Q8IWY9 1227 aa13.54□□□□□ -0.24
CLP1-205ENST00000533682 LARGE2Q8N3Y3 721 aa13.54□□□□□ -0.24
CLP1-205ENST00000533682 PRDM10Q9NQV6 1147 aa13.54□□□□□ -0.24
CLP1-205ENST00000533682 SAMSN1Q9NSI8 373 aaKnown RBP13.54□□□□□ -0.24
CLP1-205ENST00000533682 GREB1LQ9C091 1923 aaPredicted RBP13.54□□□□□ -0.24
CLP1-205ENST00000533682 ZBTB7AO95365 584 aa13.53□□□□□ -0.24
CLP1-205ENST00000533682 ZSCAN20P17040 1043 aaPredicted RBP13.53□□□□□ -0.24
CLP1-205ENST00000533682 SMARCA1P28370 1054 aa13.53□□□□□ -0.24
CLP1-205ENST00000533682 GNA11P29992 359 aa13.53□□□□□ -0.24
CLP1-205ENST00000533682 NONOQ15233 471 aaKnown RBP eCLIP13.53□□□□□ -0.24
CLP1-205ENST00000533682 REXO1Q8N1G1 1221 aaKnown RBP13.53□□□□□ -0.24
CLP1-205ENST00000533682 IQUBQ8NA54 791 aa13.53□□□□□ -0.24
CLP1-205ENST00000533682 UIMC1Q96RL1 719 aa13.53□□□□□ -0.24
CLP1-205ENST00000533682 DHX36Q9H2U1 1008 aaKnown RBP13.53□□□□□ -0.24
CLP1-205ENST00000533682 SPTLC3Q9NUV7 552 aa13.53□□□□□ -0.24
CLP1-205ENST00000533682 NFE2L3Q9Y4A8 694 aa13.53□□□□□ -0.24
CLP1-205ENST00000533682 SERPINC1P01008 464 aa13.53□□□□□ -0.24
CLP1-205ENST00000533682 TAL1P17542 331 aaPredicted RBP13.53□□□□□ -0.24
CLP1-205ENST00000533682 BAG6P46379 1132 aa13.53□□□□□ -0.24
CLP1-205ENST00000533682 UBASH3AP57075 661 aa13.53□□□□□ -0.24
CLP1-205ENST00000533682 SF3B2Q13435 895 aaKnown RBP13.53□□□□□ -0.24
CLP1-205ENST00000533682 NAALADL2Q58DX5 795 aa13.53□□□□□ -0.24
CLP1-205ENST00000533682 CCDC12Q8WUD4 166 aaPredicted RBP13.53□□□□□ -0.24
CLP1-205ENST00000533682 CCDC94Q9BW85 323 aaPredicted RBP13.53□□□□□ -0.24
CLP1-205ENST00000533682 MYO3BQ8WXR4 1341 aa13.52□□□□□ -0.24
CLP1-205ENST00000533682 LONP1P36776 959 aaKnown RBP13.52□□□□□ -0.24
CLP1-205ENST00000533682 TPM4P67936 248 aa13.52□□□□□ -0.24
CLP1-205ENST00000533682 GOLGA8FQ08AF8 430 aa13.52□□□□□ -0.24
CLP1-205ENST00000533682 GOLGA8DPQ0D2H9 430 aa13.52□□□□□ -0.24
CLP1-205ENST00000533682 TATDN1Q6P1N9 297 aa13.52□□□□□ -0.24
CLP1-205ENST00000533682 POTEDQ86YR6 584 aa13.52□□□□□ -0.24
CLP1-205ENST00000533682 MLKLQ8NB16 471 aa13.52□□□□□ -0.24
CLP1-205ENST00000533682 GJA10Q969M2 543 aa13.52□□□□□ -0.24
CLP1-205ENST00000533682 CSRNP1Q96S65 589 aa13.52□□□□□ -0.24
CLP1-205ENST00000533682 TRIM34Q9BYJ4 488 aa13.52□□□□□ -0.24
CLP1-205ENST00000533682 INTS13Q9NVM9 706 aa13.52□□□□□ -0.24
CLP1-205ENST00000533682 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.52□□□□□ -0.24
CLP1-205ENST00000533682 PNMA6FA0A0J9YX94 578 aa13.52□□□□□ -0.25
CLP1-205ENST00000533682 GH2P01242 217 aa13.52□□□□□ -0.25
CLP1-205ENST00000533682 TECP42680 631 aa13.52□□□□□ -0.25
CLP1-205ENST00000533682 CCDC93Q567U6 631 aa13.52□□□□□ -0.25
CLP1-205ENST00000533682 ARMCX5Q6P1M9 558 aa13.52□□□□□ -0.25
CLP1-205ENST00000533682 KRT25Q7Z3Z0 450 aa13.52□□□□□ -0.25
CLP1-205ENST00000533682 NEK8Q86SG6 692 aa13.52□□□□□ -0.25
CLP1-205ENST00000533682 CCDC17Q96LX7 622 aa13.52□□□□□ -0.25
CLP1-205ENST00000533682 MAPK8IP1Q9UQF2 711 aa13.52□□□□□ -0.25
CLP1-205ENST00000533682 ATF5Q9Y2D1 282 aaPredicted RBP13.52□□□□□ -0.25
CLP1-205ENST00000533682 C10orf71Q711Q0 1435 aa13.52□□□□□ -0.25
CLP1-205ENST00000533682 TDP2O95551 362 aa13.51□□□□□ -0.25
CLP1-205ENST00000533682 SLC1A4P43007 532 aa13.51□□□□□ -0.25
CLP1-205ENST00000533682 CC2D2BQ6DHV5 1058 aa13.51□□□□□ -0.25
CLP1-205ENST00000533682 RSBN1LQ6PCB5 846 aaPredicted RBP13.51□□□□□ -0.25
CLP1-205ENST00000533682 RASSF8Q8NHQ8 419 aa13.51□□□□□ -0.25
CLP1-205ENST00000533682 DISC1Q9NRI5 854 aa13.51□□□□□ -0.25
CLP1-205ENST00000533682 SHTN1A0MZ66 631 aa13.51□□□□□ -0.25
CLP1-205ENST00000533682 SPDYE2BA6NHP3 402 aa13.51□□□□□ -0.25
CLP1-205ENST00000533682 USP27XA6NNY8 438 aa13.51□□□□□ -0.25
CLP1-205ENST00000533682 SLC37A4O43826 429 aa13.51□□□□□ -0.25
CLP1-205ENST00000533682 NEMFO60524 1076 aa13.51□□□□□ -0.25
CLP1-205ENST00000533682 SPDYE6P0CI01 402 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms