RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 FAM178BQ8IXR5 827 aa19.39■□□□□ 0.7
PHRF1-205ENST00000533464 U2AF1L4Q8WU68 220 aaKnown RBP19.39■□□□□ 0.7
PHRF1-205ENST00000533464 CACTINQ8WUQ7 758 aaKnown RBP19.39■□□□□ 0.7
PHRF1-205ENST00000533464 AMNQ9BXJ7 453 aa19.39■□□□□ 0.7
PHRF1-205ENST00000533464 QTRT2Q9H974 415 aaKnown RBP19.39■□□□□ 0.7
PHRF1-205ENST00000533464 SPHKAPQ2M3C7 1700 aa19.39■□□□□ 0.69
PHRF1-205ENST00000533464 ADGRL3Q9HAR2 1447 aa19.39■□□□□ 0.69
PHRF1-205ENST00000533464 TRIM37O94972 964 aa19.39■□□□□ 0.69
PHRF1-205ENST00000533464 MECOMQ03112 1051 aa19.39■□□□□ 0.69
PHRF1-205ENST00000533464 ADAM9Q13443 819 aa19.39■□□□□ 0.69
PHRF1-205ENST00000533464 APBB1IPQ7Z5R6 666 aaPredicted RBP19.39■□□□□ 0.69
PHRF1-205ENST00000533464 PLA2G4DQ86XP0 818 aa19.39■□□□□ 0.69
PHRF1-205ENST00000533464 SPICE1Q8N0Z3 855 aa19.39■□□□□ 0.69
PHRF1-205ENST00000533464 HAUS4Q9H6D7 363 aa19.39■□□□□ 0.69
PHRF1-205ENST00000533464 MYO1AQ9UBC5 1043 aa19.39■□□□□ 0.69
PHRF1-205ENST00000533464 SERPINB13Q9UIV8 391 aa19.39■□□□□ 0.69
PHRF1-205ENST00000533464 KIAA1024Q9UPX6 916 aa19.39■□□□□ 0.69
PHRF1-205ENST00000533464 CASP14P31944 242 aa19.39■□□□□ 0.69
PHRF1-205ENST00000533464 PTPN21Q16825 1174 aa19.39■□□□□ 0.69
PHRF1-205ENST00000533464 BSDC1Q9NW68 430 aaPredicted RBP19.39■□□□□ 0.69
PHRF1-205ENST00000533464 TXNDC16Q9P2K2 825 aa19.39■□□□□ 0.69
PHRF1-205ENST00000533464 EPN1Q9Y6I3 576 aaPredicted RBP19.39■□□□□ 0.69
PHRF1-205ENST00000533464 MADDQ8WXG6 1647 aa19.39■□□□□ 0.69
PHRF1-205ENST00000533464 LAD1O00515 517 aa19.39■□□□□ 0.69
PHRF1-205ENST00000533464 TNNI1P19237 187 aa19.39■□□□□ 0.69
PHRF1-205ENST00000533464 PAK2Q13177 524 aa19.39■□□□□ 0.69
PHRF1-205ENST00000533464 IWS1Q96ST2 819 aa19.39■□□□□ 0.69
PHRF1-205ENST00000533464 GJB4Q9NTQ9 266 aa19.39■□□□□ 0.69
PHRF1-205ENST00000533464 COL4A3BPQ9Y5P4 624 aa19.39■□□□□ 0.69
PHRF1-205ENST00000533464 TTLL1O95922 423 aa19.38■□□□□ 0.69
PHRF1-205ENST00000533464 CD19P15391 556 aa19.38■□□□□ 0.69
PHRF1-205ENST00000533464 PLEKHA4Q9H4M7 779 aa19.38■□□□□ 0.69
PHRF1-205ENST00000533464 SAMD15Q9P1V8 674 aa19.38■□□□□ 0.69
PHRF1-205ENST00000533464 USTQ9Y2C2 406 aa19.38■□□□□ 0.69
PHRF1-205ENST00000533464 THRAP3Q9Y2W1 955 aaKnown RBP19.38■□□□□ 0.69
PHRF1-205ENST00000533464 PCDHB6Q9Y5E3 794 aa19.38■□□□□ 0.69
PHRF1-205ENST00000533464 PALLDQ8WX93 1383 aa19.38■□□□□ 0.69
PHRF1-205ENST00000533464 PSDA5PKW4 1024 aaPredicted RBP19.38■□□□□ 0.69
PHRF1-205ENST00000533464 ABCB4P21439 1286 aa19.38■□□□□ 0.69
PHRF1-205ENST00000533464 POLR2FP61218 127 aaKnown RBP19.38■□□□□ 0.69
PHRF1-205ENST00000533464 MXRA7P84157 204 aa19.38■□□□□ 0.69
PHRF1-205ENST00000533464 WHAMMP3Q1A5X7 153 aa19.38■□□□□ 0.69
PHRF1-205ENST00000533464 DCUN1D2Q6PH85 259 aa19.38■□□□□ 0.69
PHRF1-205ENST00000533464 ASIC3Q9UHC3 531 aa19.38■□□□□ 0.69
PHRF1-205ENST00000533464 OTUD6AQ7L8S5 288 aa19.38■□□□□ 0.69
PHRF1-205ENST00000533464 TUBGCP2Q9BSJ2 902 aa19.38■□□□□ 0.69
PHRF1-205ENST00000533464 PRPF3O43395 683 aaKnown RBP19.38■□□□□ 0.69
PHRF1-205ENST00000533464 FOSP01100 380 aaPredicted RBP19.38■□□□□ 0.69
PHRF1-205ENST00000533464 CYP2E1P05181 493 aaPredicted RBP19.38■□□□□ 0.69
PHRF1-205ENST00000533464 TTC16Q8NEE8 873 aa19.38■□□□□ 0.69
PHRF1-205ENST00000533464 RPGRIP1Q96KN7 1286 aa19.38■□□□□ 0.69
PHRF1-205ENST00000533464 IRX3P78415 501 aaPredicted RBP19.38■□□□□ 0.69
PHRF1-205ENST00000533464 KCTD1Q719H9 257 aa19.38■□□□□ 0.69
PHRF1-205ENST00000533464 KIAA1524Q8TCG1 905 aa19.38■□□□□ 0.69
PHRF1-205ENST00000533464 PIGSQ96S52 555 aa19.38■□□□□ 0.69
PHRF1-205ENST00000533464 MAGEF1Q9HAY2 307 aa19.38■□□□□ 0.69
PHRF1-205ENST00000533464 NKIRAS1Q9NYS0 192 aa19.38■□□□□ 0.69
PHRF1-205ENST00000533464 LARSQ9P2J5 1176 aaKnown RBP19.38■□□□□ 0.69
PHRF1-205ENST00000533464 CDC42BPGQ6DT37 1551 aa19.37■□□□□ 0.69
PHRF1-205ENST00000533464 LRRC7Q96NW7 1537 aa19.37■□□□□ 0.69
PHRF1-205ENST00000533464 CDC25BP30305 580 aa19.37■□□□□ 0.69
PHRF1-205ENST00000533464 GOLGA8FQ08AF8 430 aa19.37■□□□□ 0.69
PHRF1-205ENST00000533464 GOLGA8DPQ0D2H9 430 aa19.37■□□□□ 0.69
PHRF1-205ENST00000533464 FAM102BQ5T8I3 360 aa19.37■□□□□ 0.69
PHRF1-205ENST00000533464 USP17L2Q6R6M4 530 aa19.37■□□□□ 0.69
PHRF1-205ENST00000533464 TBCKQ8TEA7 893 aa19.37■□□□□ 0.69
PHRF1-205ENST00000533464 LARP4BQ92615 738 aaKnown RBP19.37■□□□□ 0.69
PHRF1-205ENST00000533464 FERP16591 822 aa19.37■□□□□ 0.69
PHRF1-205ENST00000533464 BAG6P46379 1132 aa19.37■□□□□ 0.69
PHRF1-205ENST00000533464 ARHGEF16Q5VV41 709 aa19.37■□□□□ 0.69
PHRF1-205ENST00000533464 CUEDC2Q9H467 287 aa19.37■□□□□ 0.69
PHRF1-205ENST00000533464 DBNDD1Q9H9R9 158 aa19.37■□□□□ 0.69
PHRF1-205ENST00000533464 SWAP70Q9UH65 585 aa19.37■□□□□ 0.69
PHRF1-205ENST00000533464 BCS1LQ9Y276 419 aa19.37■□□□□ 0.69
PHRF1-205ENST00000533464 SLC16A2P36021 539 aa19.37■□□□□ 0.69
PHRF1-205ENST00000533464 GBP6Q6ZN66 633 aa19.37■□□□□ 0.69
PHRF1-205ENST00000533464 CDAN1Q8IWY9 1227 aa19.37■□□□□ 0.69
PHRF1-205ENST00000533464 PGBD1Q96JS3 809 aa19.37■□□□□ 0.69
PHRF1-205ENST00000533464 CNOT6LQ96LI5 555 aaKnown RBP19.37■□□□□ 0.69
PHRF1-205ENST00000533464 MAN1B1Q9UKM7 699 aa19.37■□□□□ 0.69
PHRF1-205ENST00000533464 NDUFAB1O14561 156 aa19.37■□□□□ 0.69
PHRF1-205ENST00000533464 CLEC4GQ6UXB4 293 aa19.37■□□□□ 0.69
PHRF1-205ENST00000533464 IPO4Q8TEX9 1081 aaKnown RBP19.37■□□□□ 0.69
PHRF1-205ENST00000533464 GLG1Q92896 1179 aa19.37■□□□□ 0.69
PHRF1-205ENST00000533464 AK8Q96MA6 479 aa19.36■□□□□ 0.69
PHRF1-205ENST00000533464 CSRNP1Q96S65 589 aa19.36■□□□□ 0.69
PHRF1-205ENST00000533464 VIMP08670 466 aaKnown RBP19.36■□□□□ 0.69
PHRF1-205ENST00000533464 CCDC6Q16204 474 aa19.36■□□□□ 0.69
PHRF1-205ENST00000533464 GNPTABQ3T906 1256 aa19.36■□□□□ 0.69
PHRF1-205ENST00000533464 XKR9Q5GH70 373 aa19.36■□□□□ 0.69
PHRF1-205ENST00000533464 GJA10Q969M2 543 aa19.36■□□□□ 0.69
PHRF1-205ENST00000533464 DDX41Q9UJV9 622 aaKnown RBP19.36■□□□□ 0.69
PHRF1-205ENST00000533464 CCDC105Q8IYK2 499 aa19.36■□□□□ 0.69
PHRF1-205ENST00000533464 CLRN2A0PK11 232 aa19.36■□□□□ 0.69
PHRF1-205ENST00000533464 BUB1O43683 1085 aa19.36■□□□□ 0.69
PHRF1-205ENST00000533464 KRT19P08727 400 aa19.36■□□□□ 0.69
PHRF1-205ENST00000533464 UAP1Q16222 522 aaPredicted RBP19.36■□□□□ 0.69
PHRF1-205ENST00000533464 TMC4Q7Z404 712 aa19.36■□□□□ 0.69
PHRF1-205ENST00000533464 ANKRD13CQ8N6S4 541 aa19.36■□□□□ 0.69
PHRF1-205ENST00000533464 SRPRBQ9Y5M8 271 aaKnown RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms