RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 CCDC174Q6PII3 467 aa18.03■□□□□ 0.48
CPSF1-210ENST00000532935 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.03■□□□□ 0.48
CPSF1-210ENST00000532935 CHST13Q8NET6 341 aa18.03■□□□□ 0.48
CPSF1-210ENST00000532935 AGBL1Q96MI9 1066 aa18.03■□□□□ 0.48
CPSF1-210ENST00000532935 FBXO40Q9UH90 709 aa18.03■□□□□ 0.48
CPSF1-210ENST00000532935 FARP2O94887 1054 aaPredicted RBP18.02■□□□□ 0.48
CPSF1-210ENST00000532935 ZNF792Q3KQV3 632 aa18.02■□□□□ 0.48
CPSF1-210ENST00000532935 STOX1Q6ZVD7 989 aa18.02■□□□□ 0.48
CPSF1-210ENST00000532935 UBE2Q1Q7Z7E8 422 aa18.02■□□□□ 0.48
CPSF1-210ENST00000532935 DDX11Q96FC9 970 aa18.02■□□□□ 0.48
CPSF1-210ENST00000532935 RANBP17Q9H2T7 1088 aaKnown RBP18.02■□□□□ 0.48
CPSF1-210ENST00000532935 ANO2Q9NQ90 1003 aa18.02■□□□□ 0.48
CPSF1-210ENST00000532935 HOMER2Q9NSB8 354 aa18.02■□□□□ 0.48
CPSF1-210ENST00000532935 DIS3Q9Y2L1 958 aaKnown RBP18.02■□□□□ 0.48
CPSF1-210ENST00000532935 CDC45O75419 566 aa18.01■□□□□ 0.47
CPSF1-210ENST00000532935 SEC23AQ15436 765 aa18.01■□□□□ 0.47
CPSF1-210ENST00000532935 TKFCQ3LXA3 575 aa18.01■□□□□ 0.47
CPSF1-210ENST00000532935 GPATCH4Q5T3I0 446 aaKnown RBP18.01■□□□□ 0.47
CPSF1-210ENST00000532935 IFIT1BQ5T764 474 aaKnown RBP18.01■□□□□ 0.47
CPSF1-210ENST00000532935 CASC1Q6TDU7 716 aa18.01■□□□□ 0.47
CPSF1-210ENST00000532935 RALYLQ86SE5 291 aaKnown RBP18.01■□□□□ 0.47
CPSF1-210ENST00000532935 ANKRD35Q8N283 1001 aa18.01■□□□□ 0.47
CPSF1-210ENST00000532935 TRPV1Q8NER1 839 aa18.01■□□□□ 0.47
CPSF1-210ENST00000532935 NCOA7Q8NI08 942 aa18.01■□□□□ 0.47
CPSF1-210ENST00000532935 RNF146Q9NTX7 359 aa18.01■□□□□ 0.47
CPSF1-210ENST00000532935 PPP4R2Q9NY27 417 aa18.01■□□□□ 0.47
CPSF1-210ENST00000532935 LCTP09848 1927 aa18.01■□□□□ 0.47
CPSF1-210ENST00000532935 ALPK3Q96L96 1907 aa18■□□□□ 0.47
CPSF1-210ENST00000532935 DNAJC25-GNG10A0A024R161 153 aa18■□□□□ 0.47
CPSF1-210ENST00000532935 GOLGA8HP0CJ92 632 aa18■□□□□ 0.47
CPSF1-210ENST00000532935 ALAS1P13196 640 aa18■□□□□ 0.47
CPSF1-210ENST00000532935 CYBAP13498 195 aa18■□□□□ 0.47
CPSF1-210ENST00000532935 LHX8Q68G74 356 aa18■□□□□ 0.47
CPSF1-210ENST00000532935 ANKLE1Q8NAG6 615 aa18■□□□□ 0.47
CPSF1-210ENST00000532935 TRERF1Q96PN7 1200 aa18■□□□□ 0.47
CPSF1-210ENST00000532935 ACAD9Q9H845 621 aa18■□□□□ 0.47
CPSF1-210ENST00000532935 OGDHLQ9ULD0 1010 aa18■□□□□ 0.47
CPSF1-210ENST00000532935 CCPG1Q9ULG6 757 aa18■□□□□ 0.47
CPSF1-210ENST00000532935 ICAM1P05362 532 aa17.99■□□□□ 0.47
CPSF1-210ENST00000532935 CNGA1P29973 690 aa17.99■□□□□ 0.47
CPSF1-210ENST00000532935 TINF2Q9BSI4 451 aa17.99■□□□□ 0.47
CPSF1-210ENST00000532935 DNAH12Q6ZR08 3092 aa17.98■□□□□ 0.47
CPSF1-210ENST00000532935 IFIT3O14879 490 aaKnown RBP17.98■□□□□ 0.47
CPSF1-210ENST00000532935 SLC27A2O14975 620 aa17.98■□□□□ 0.47
CPSF1-210ENST00000532935 NECTIN1Q15223 517 aa17.98■□□□□ 0.47
CPSF1-210ENST00000532935 ASPRV1Q53RT3 343 aa17.98■□□□□ 0.47
CPSF1-210ENST00000532935 PRAMEF19Q5SWL8 479 aa17.98■□□□□ 0.47
CPSF1-210ENST00000532935 CREB3L3Q68CJ9 461 aa17.98■□□□□ 0.47
CPSF1-210ENST00000532935 CHST3Q7LGC8 479 aa17.98■□□□□ 0.47
CPSF1-210ENST00000532935 MB21D2Q8IYB1 491 aaPredicted RBP17.98■□□□□ 0.47
CPSF1-210ENST00000532935 DDX20Q9UHI6 824 aaKnown RBP17.98■□□□□ 0.47
CPSF1-210ENST00000532935 ERICH2A1L162 156 aa17.97■□□□□ 0.47
CPSF1-210ENST00000532935 MSCO60682 206 aa17.97■□□□□ 0.47
CPSF1-210ENST00000532935 PARP1P09874 1014 aaKnown RBP17.97■□□□□ 0.47
CPSF1-210ENST00000532935 TAL1P17542 331 aaPredicted RBP17.97■□□□□ 0.47
CPSF1-210ENST00000532935 MNX1P50219 401 aaPredicted RBP17.97■□□□□ 0.47
CPSF1-210ENST00000532935 ANTXR2P58335 489 aa17.97■□□□□ 0.47
CPSF1-210ENST00000532935 SART3Q15020 963 aaKnown RBP17.97■□□□□ 0.47
CPSF1-210ENST00000532935 MUM1L1Q5H9M0 696 aa17.97■□□□□ 0.47
CPSF1-210ENST00000532935 MSL3Q8N5Y2 521 aaKnown RBP17.97■□□□□ 0.47
CPSF1-210ENST00000532935 DIS3LQ8TF46 1054 aaKnown RBP17.97■□□□□ 0.47
CPSF1-210ENST00000532935 PAWRQ96IZ0 340 aaKnown RBP17.97■□□□□ 0.47
CPSF1-210ENST00000532935 UBA5Q9GZZ9 404 aa17.97■□□□□ 0.47
CPSF1-210ENST00000532935 CPVLQ9H3G5 476 aa17.97■□□□□ 0.47
CPSF1-210ENST00000532935 A1CFQ9NQ94 594 aaKnown RBP17.97■□□□□ 0.47
CPSF1-210ENST00000532935 CEP290O15078 2479 aa17.97■□□□□ 0.47
CPSF1-210ENST00000532935 PFASO15067 1338 aa17.97■□□□□ 0.47
CPSF1-210ENST00000532935 SEPT4O43236 478 aa17.96■□□□□ 0.47
CPSF1-210ENST00000532935 WTAPQ15007 396 aa17.96■□□□□ 0.47
CPSF1-210ENST00000532935 MAMDC4Q6UXC1 1216 aa17.96■□□□□ 0.47
CPSF1-210ENST00000532935 NECAB2Q7Z6G3 386 aa17.96■□□□□ 0.47
CPSF1-210ENST00000532935 ZNF467Q7Z7K2 595 aaPredicted RBP17.96■□□□□ 0.47
CPSF1-210ENST00000532935 FGD4Q96M96 766 aa17.96■□□□□ 0.47
CPSF1-210ENST00000532935 NRBP1Q9UHY1 535 aa17.96■□□□□ 0.47
CPSF1-210ENST00000532935 PNMA2Q9UL42 364 aa17.96■□□□□ 0.47
CPSF1-210ENST00000532935 SYNGAP1Q96PV0 1343 aa17.96■□□□□ 0.46
CPSF1-210ENST00000532935 BAZ2BQ9UIF8 2168 aaKnown RBP17.96■□□□□ 0.46
CPSF1-210ENST00000532935 POTEB2H3BUK9 544 aa17.95■□□□□ 0.46
CPSF1-210ENST00000532935 CNTN2Q02246 1040 aa17.95■□□□□ 0.46
CPSF1-210ENST00000532935 TMEM67Q5HYA8 995 aa17.95■□□□□ 0.46
CPSF1-210ENST00000532935 PRPF38BQ5VTL8 546 aaKnown RBP17.95■□□□□ 0.46
CPSF1-210ENST00000532935 ADGRF4Q8IZF3 695 aa17.95■□□□□ 0.46
CPSF1-210ENST00000532935 FAM133AQ8N9E0 248 aa17.95■□□□□ 0.46
CPSF1-210ENST00000532935 HTATIP2Q9BUP3 242 aa17.95■□□□□ 0.46
CPSF1-210ENST00000532935 SENP2Q9HC62 589 aa17.95■□□□□ 0.46
CPSF1-210ENST00000532935 CYP39A1Q9NYL5 469 aa17.95■□□□□ 0.46
CPSF1-210ENST00000532935 WDR19Q8NEZ3 1342 aa17.95■□□□□ 0.46
CPSF1-210ENST00000532935 LRRC37A2A6NM11 1700 aa17.95■□□□□ 0.46
CPSF1-210ENST00000532935 RNF20Q5VTR2 975 aa17.94■□□□□ 0.46
CPSF1-210ENST00000532935 STAG2Q8N3U4 1231 aa17.94■□□□□ 0.46
CPSF1-210ENST00000532935 IGDCC4Q8TDY8 1250 aa17.94■□□□□ 0.46
CPSF1-210ENST00000532935 CNPY2Q9Y2B0 182 aa17.94■□□□□ 0.46
CPSF1-210ENST00000532935 PRC1O43663 620 aa17.93■□□□□ 0.46
CPSF1-210ENST00000532935 SNAI1O95863 264 aaPredicted RBP17.93■□□□□ 0.46
CPSF1-210ENST00000532935 ZNF865P0CJ78 1059 aaPredicted RBP17.93■□□□□ 0.46
CPSF1-210ENST00000532935 MCM5P33992 734 aa17.93■□□□□ 0.46
CPSF1-210ENST00000532935 CDC37Q16543 378 aaPredicted RBP17.93■□□□□ 0.46
CPSF1-210ENST00000532935 ANO1Q5XXA6 986 aa17.93■□□□□ 0.46
CPSF1-210ENST00000532935 NSMFQ6X4W1 530 aa17.93■□□□□ 0.46
CPSF1-210ENST00000532935 DPF3Q92784 378 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms