RNA–Protein interactions for RNA: ENST00000532893.5

CDC27-209, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-209ENST00000532893 ZNF467Q7Z7K2 595 aaPredicted RBP17.34■□□□□ 0.37
CDC27-209ENST00000532893 PRPF38AQ8NAV1 312 aaKnown RBP17.34■□□□□ 0.37
CDC27-209ENST00000532893 BOLA2Q9H3K6 86 aa17.34■□□□□ 0.37
CDC27-209ENST00000532893 SLC28A3Q9HAS3 691 aa17.34■□□□□ 0.37
CDC27-209ENST00000532893 YBX2Q9Y2T7 364 aaKnown RBP17.34■□□□□ 0.37
CDC27-209ENST00000532893 CTDP1Q9Y5B0 961 aaPredicted RBP17.34■□□□□ 0.37
CDC27-209ENST00000532893 SLC4A4Q9Y6R1 1079 aa17.34■□□□□ 0.37
CDC27-209ENST00000532893 F5H6K3 240 aa17.33■□□□□ 0.36
CDC27-209ENST00000532893 ZBED4O75132 1171 aa17.33■□□□□ 0.36
CDC27-209ENST00000532893 BEX3Q00994 111 aa17.33■□□□□ 0.36
CDC27-209ENST00000532893 KLRC3Q07444 240 aa17.33■□□□□ 0.36
CDC27-209ENST00000532893 ANKRD35Q8N283 1001 aa17.33■□□□□ 0.36
CDC27-209ENST00000532893 FGD4Q96M96 766 aa17.33■□□□□ 0.36
CDC27-209ENST00000532893 RAVER2Q9HCJ3 691 aaKnown RBP17.33■□□□□ 0.36
CDC27-209ENST00000532893 BAZ2AQ9UIF9 1905 aaKnown RBP17.33■□□□□ 0.36
CDC27-209ENST00000532893 MYH8P13535 1937 aa17.32■□□□□ 0.36
CDC27-209ENST00000532893 CTAGE5O15320 804 aa17.32■□□□□ 0.36
CDC27-209ENST00000532893 CD4P01730 458 aa17.32■□□□□ 0.36
CDC27-209ENST00000532893 ARMCX2Q7L311 632 aa17.32■□□□□ 0.36
CDC27-209ENST00000532893 OTOP2Q7RTS6 562 aa17.32■□□□□ 0.36
CDC27-209ENST00000532893 STK11IPQ8N1F8 1099 aa17.32■□□□□ 0.36
CDC27-209ENST00000532893 FAM122AQ96E09 287 aa17.32■□□□□ 0.36
CDC27-209ENST00000532893 KIF1BPQ96EK5 621 aa17.32■□□□□ 0.36
CDC27-209ENST00000532893 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.32■□□□□ 0.36
CDC27-209ENST00000532893 MTIF3Q9H2K0 278 aaKnown RBP17.32■□□□□ 0.36
CDC27-209ENST00000532893 UMODL1Q5DID0 1318 aa17.31■□□□□ 0.36
CDC27-209ENST00000532893 ATP2A1O14983 1001 aa17.31■□□□□ 0.36
CDC27-209ENST00000532893 NDUFB10O96000 172 aa17.31■□□□□ 0.36
CDC27-209ENST00000532893 PLA2G5P39877 138 aa17.31■□□□□ 0.36
CDC27-209ENST00000532893 RABGGTBP53611 331 aa17.31■□□□□ 0.36
CDC27-209ENST00000532893 NOL8Q76FK4 1167 aaKnown RBP17.31■□□□□ 0.36
CDC27-209ENST00000532893 CCDC144CPQ8IYA2 1237 aa17.31■□□□□ 0.36
CDC27-209ENST00000532893 MICALL1Q8N3F8 863 aa17.31■□□□□ 0.36
CDC27-209ENST00000532893 KIFC2Q96AC6 838 aa17.31■□□□□ 0.36
CDC27-209ENST00000532893 NECAB3Q96P71 396 aaPredicted RBP17.31■□□□□ 0.36
CDC27-209ENST00000532893 HIPK3Q9H422 1215 aa17.31■□□□□ 0.36
CDC27-209ENST00000532893 NYAP2Q9P242 653 aa17.31■□□□□ 0.36
CDC27-209ENST00000532893 CLIP2Q9UDT6 1046 aa17.31■□□□□ 0.36
CDC27-209ENST00000532893 RASA1P20936 1047 aa17.3■□□□□ 0.36
CDC27-209ENST00000532893 CCL23P55773 120 aa17.3■□□□□ 0.36
CDC27-209ENST00000532893 CNTN2Q02246 1040 aa17.3■□□□□ 0.36
CDC27-209ENST00000532893 UBE3CQ15386 1083 aa17.3■□□□□ 0.36
CDC27-209ENST00000532893 CXCL17Q6UXB2 119 aa17.3■□□□□ 0.36
CDC27-209ENST00000532893 PUS7LQ9H0K6 701 aaKnown RBP17.3■□□□□ 0.36
CDC27-209ENST00000532893 TSPYL2Q9H2G4 693 aaPredicted RBP17.3■□□□□ 0.36
CDC27-209ENST00000532893 MKNK2Q9HBH9 465 aa17.3■□□□□ 0.36
CDC27-209ENST00000532893 ZBED9Q6R2W3 1325 aa17.29■□□□□ 0.36
CDC27-209ENST00000532893 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.29■□□□□ 0.36
CDC27-209ENST00000532893 BMP1P13497 986 aa17.29■□□□□ 0.36
CDC27-209ENST00000532893 MYOGP15173 224 aa17.29■□□□□ 0.36
CDC27-209ENST00000532893 ATP5JP18859 108 aa17.29■□□□□ 0.36
CDC27-209ENST00000532893 TNFAIP2Q03169 654 aa17.29■□□□□ 0.36
CDC27-209ENST00000532893 TFF2Q03403 129 aa17.29■□□□□ 0.36
CDC27-209ENST00000532893 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.29■□□□□ 0.36
CDC27-209ENST00000532893 SLC43A3Q8NBI5 491 aa17.29■□□□□ 0.36
CDC27-209ENST00000532893 CHST13Q8NET6 341 aa17.29■□□□□ 0.36
CDC27-209ENST00000532893 PANK1Q8TE04 598 aa17.29■□□□□ 0.36
CDC27-209ENST00000532893 KATNBL1Q9H079 304 aa17.29■□□□□ 0.36
CDC27-209ENST00000532893 SLC38A10Q9HBR0 1119 aa17.29■□□□□ 0.36
CDC27-209ENST00000532893 HOMER2Q9NSB8 354 aa17.29■□□□□ 0.36
CDC27-209ENST00000532893 FBXO40Q9UH90 709 aa17.29■□□□□ 0.36
CDC27-209ENST00000532893 REV3LO60673 3130 aa17.28■□□□□ 0.36
CDC27-209ENST00000532893 ASTN1O14525 1302 aa17.28■□□□□ 0.36
CDC27-209ENST00000532893 CCER2I3L3R5 266 aa17.28■□□□□ 0.36
CDC27-209ENST00000532893 NKX3-2P78367 333 aa17.28■□□□□ 0.36
CDC27-209ENST00000532893 ITGA7Q13683 1181 aa17.28■□□□□ 0.36
CDC27-209ENST00000532893 HAUS7Q99871 368 aa17.28■□□□□ 0.36
CDC27-209ENST00000532893 TRPV6Q9H1D0 765 aa17.28■□□□□ 0.36
CDC27-209ENST00000532893 SLC4A7Q9Y6M7 1214 aa17.28■□□□□ 0.36
CDC27-209ENST00000532893 MCM3APO60318 1980 aa17.28■□□□□ 0.36
CDC27-209ENST00000532893 TCF20Q9UGU0 1960 aaKnown RBP17.28■□□□□ 0.36
CDC27-209ENST00000532893 GRIN2DO15399 1336 aa17.27■□□□□ 0.36
CDC27-209ENST00000532893 MINDY4BA8MYZ0 360 aa17.27■□□□□ 0.36
CDC27-209ENST00000532893 CABYRO75952 493 aa17.27■□□□□ 0.36
CDC27-209ENST00000532893 PTGS1P23219 599 aa17.27■□□□□ 0.36
CDC27-209ENST00000532893 PPP2R2DQ66LE6 453 aa17.27■□□□□ 0.36
CDC27-209ENST00000532893 NOC4LQ9BVI4 516 aaKnown RBP17.27■□□□□ 0.36
CDC27-209ENST00000532893 ARPP21Q9UBL0 812 aaPredicted RBP17.27■□□□□ 0.36
CDC27-209ENST00000532893 FEM1BQ9UK73 627 aa17.27■□□□□ 0.36
CDC27-209ENST00000532893 XIRP2A4UGR9 3374 aa17.26■□□□□ 0.35
CDC27-209ENST00000532893 ZBBXA8MT70 800 aa17.26■□□□□ 0.35
CDC27-209ENST00000532893 DYNC1LI2O43237 492 aaPredicted RBP17.26■□□□□ 0.35
CDC27-209ENST00000532893 ABCB7O75027 752 aa17.26■□□□□ 0.35
CDC27-209ENST00000532893 SKIV2LQ15477 1246 aaKnown RBP17.26■□□□□ 0.35
CDC27-209ENST00000532893 FSCN1Q16658 493 aaKnown RBP17.26■□□□□ 0.35
CDC27-209ENST00000532893 SBK1Q52WX2 424 aa17.26■□□□□ 0.35
CDC27-209ENST00000532893 ZSCAN25Q6NSZ9 544 aa17.26■□□□□ 0.35
CDC27-209ENST00000532893 TLK2Q86UE8 772 aa17.26■□□□□ 0.35
CDC27-209ENST00000532893 RPUSD2Q8IZ73 545 aaKnown RBP17.26■□□□□ 0.35
CDC27-209ENST00000532893 STRBPQ96SI9 672 aaKnown RBP17.26■□□□□ 0.35
CDC27-209ENST00000532893 C1QTNF1Q9BXJ1 281 aa17.26■□□□□ 0.35
CDC27-209ENST00000532893 AP5M1Q9H0R1 490 aa17.26■□□□□ 0.35
CDC27-209ENST00000532893 WNT8AQ9H1J5 351 aa17.26■□□□□ 0.35
CDC27-209ENST00000532893 GNEQ9Y223 722 aaKnown RBP17.26■□□□□ 0.35
CDC27-209ENST00000532893 PCDHA11Q9Y5I1 949 aa17.26■□□□□ 0.35
CDC27-209ENST00000532893 GSG1L2A8MUP6 293 aa17.25■□□□□ 0.35
CDC27-209ENST00000532893 B4GALT4O60513 344 aa17.25■□□□□ 0.35
CDC27-209ENST00000532893 RAB11FIP3O75154 756 aa17.25■□□□□ 0.35
CDC27-209ENST00000532893 KCNQ1P51787 676 aa17.25■□□□□ 0.35
CDC27-209ENST00000532893 PSMC6P62333 389 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms