RNA–Protein interactions for RNA: ENST00000532884.1

PUF60-220, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 5

Gene PUF60, Length 819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-220ENST00000532884 UBA5Q9GZZ9 404 aa16.94■□□□□ 0.3
PUF60-220ENST00000532884 CPVLQ9H3G5 476 aa16.94■□□□□ 0.3
PUF60-220ENST00000532884 CCPG1Q9ULG6 757 aa16.94■□□□□ 0.3
PUF60-220ENST00000532884 ERICH2A1L162 156 aa16.93■□□□□ 0.3
PUF60-220ENST00000532884 SLC27A2O14975 620 aa16.93■□□□□ 0.3
PUF60-220ENST00000532884 PRAMEF19Q5SWL8 479 aa16.93■□□□□ 0.3
PUF60-220ENST00000532884 CREB3L3Q68CJ9 461 aa16.93■□□□□ 0.3
PUF60-220ENST00000532884 BTNL9Q6UXG8 535 aa16.93■□□□□ 0.3
PUF60-220ENST00000532884 MAML3Q96JK9 1138 aa16.93■□□□□ 0.3
PUF60-220ENST00000532884 TRERF1Q96PN7 1200 aa16.93■□□□□ 0.3
PUF60-220ENST00000532884 RNF146Q9NTX7 359 aa16.93■□□□□ 0.3
PUF60-220ENST00000532884 ZNF536O15090 1300 aa16.93■□□□□ 0.3
PUF60-220ENST00000532884 DHX16O60231 1041 aaKnown RBP16.92■□□□□ 0.3
PUF60-220ENST00000532884 SNHG28P0DPA3 235 aa16.92■□□□□ 0.3
PUF60-220ENST00000532884 SART3Q15020 963 aaKnown RBP16.92■□□□□ 0.3
PUF60-220ENST00000532884 SEC23AQ15436 765 aa16.92■□□□□ 0.3
PUF60-220ENST00000532884 TMEM67Q5HYA8 995 aa16.92■□□□□ 0.3
PUF60-220ENST00000532884 GPATCH4Q5T3I0 446 aaKnown RBP16.92■□□□□ 0.3
PUF60-220ENST00000532884 OLFML2BQ68BL8 750 aa16.92■□□□□ 0.3
PUF60-220ENST00000532884 CHST13Q8NET6 341 aa16.92■□□□□ 0.3
PUF60-220ENST00000532884 SENP2Q9HC62 589 aa16.92■□□□□ 0.3
PUF60-220ENST00000532884 FBXO40Q9UH90 709 aa16.92■□□□□ 0.3
PUF60-220ENST00000532884 FARP2O94887 1054 aaPredicted RBP16.91■□□□□ 0.3
PUF60-220ENST00000532884 PARP1P09874 1014 aaKnown RBP16.91■□□□□ 0.3
PUF60-220ENST00000532884 WTAPQ15007 396 aa16.91■□□□□ 0.3
PUF60-220ENST00000532884 NECTIN1Q15223 517 aa16.91■□□□□ 0.3
PUF60-220ENST00000532884 ZNF792Q3KQV3 632 aa16.91■□□□□ 0.3
PUF60-220ENST00000532884 TRPV1Q8NER1 839 aa16.91■□□□□ 0.3
PUF60-220ENST00000532884 RANBP17Q9H2T7 1088 aaKnown RBP16.91■□□□□ 0.3
PUF60-220ENST00000532884 ACAD9Q9H845 621 aa16.91■□□□□ 0.3
PUF60-220ENST00000532884 VAT1LQ9HCJ6 419 aa16.91■□□□□ 0.3
PUF60-220ENST00000532884 MKI67P46013 3256 aaKnown RBP16.9■□□□□ 0.3
PUF60-220ENST00000532884 ICAM1P05362 532 aa16.9■□□□□ 0.3
PUF60-220ENST00000532884 ANTXR2P58335 489 aa16.9■□□□□ 0.3
PUF60-220ENST00000532884 ASPRV1Q53RT3 343 aa16.9■□□□□ 0.3
PUF60-220ENST00000532884 MUM1L1Q5H9M0 696 aa16.9■□□□□ 0.3
PUF60-220ENST00000532884 ANO1Q5XXA6 986 aa16.9■□□□□ 0.3
PUF60-220ENST00000532884 MB21D2Q8IYB1 491 aaPredicted RBP16.9■□□□□ 0.3
PUF60-220ENST00000532884 CRISPLD2Q9H0B8 497 aa16.9■□□□□ 0.3
PUF60-220ENST00000532884 GPHNQ9NQX3 736 aaPredicted RBP16.9■□□□□ 0.3
PUF60-220ENST00000532884 PRC1O43663 620 aa16.89■□□□□ 0.29
PUF60-220ENST00000532884 CNTN2Q02246 1040 aa16.89■□□□□ 0.29
PUF60-220ENST00000532884 COL9A3Q14050 684 aaPredicted RBP16.89■□□□□ 0.29
PUF60-220ENST00000532884 TKFCQ3LXA3 575 aa16.89■□□□□ 0.29
PUF60-220ENST00000532884 RNF20Q5VTR2 975 aa16.89■□□□□ 0.29
PUF60-220ENST00000532884 NSMFQ6X4W1 530 aa16.89■□□□□ 0.29
PUF60-220ENST00000532884 ADGRF4Q8IZF3 695 aa16.89■□□□□ 0.29
PUF60-220ENST00000532884 STAG2Q8N3U4 1231 aa16.89■□□□□ 0.29
PUF60-220ENST00000532884 TINF2Q9BSI4 451 aa16.89■□□□□ 0.29
PUF60-220ENST00000532884 DIS3Q9Y2L1 958 aaKnown RBP16.89■□□□□ 0.29
PUF60-220ENST00000532884 RBBP6Q7Z6E9 1792 aaKnown RBP16.89■□□□□ 0.29
PUF60-220ENST00000532884 DNAJC25-GNG10A0A024R161 153 aa16.88■□□□□ 0.29
PUF60-220ENST00000532884 POTEB2H3BUK9 544 aa16.88■□□□□ 0.29
PUF60-220ENST00000532884 MYCNP04198 464 aaPredicted RBP16.88■□□□□ 0.29
PUF60-220ENST00000532884 CYBAP13498 195 aa16.88■□□□□ 0.29
PUF60-220ENST00000532884 MCM5P33992 734 aa16.88■□□□□ 0.29
PUF60-220ENST00000532884 USH1GQ495M9 461 aa16.88■□□□□ 0.29
PUF60-220ENST00000532884 LHX8Q68G74 356 aa16.88■□□□□ 0.29
PUF60-220ENST00000532884 IGDCC4Q8TDY8 1250 aa16.88■□□□□ 0.29
PUF60-220ENST00000532884 DIS3LQ8TF46 1054 aaKnown RBP16.88■□□□□ 0.29
PUF60-220ENST00000532884 PAWRQ96IZ0 340 aaKnown RBP16.88■□□□□ 0.29
PUF60-220ENST00000532884 A1CFQ9NQ94 594 aaKnown RBP16.88■□□□□ 0.29
PUF60-220ENST00000532884 DDX20Q9UHI6 824 aaKnown RBP16.88■□□□□ 0.29
PUF60-220ENST00000532884 KLRF2D3W0D1 207 aa16.87■□□□□ 0.29
PUF60-220ENST00000532884 IGHA2P01877 340 aa16.87■□□□□ 0.29
PUF60-220ENST00000532884 NFXL1Q6ZNB6 911 aa16.87■□□□□ 0.29
PUF60-220ENST00000532884 CATIPQ7Z7H3 387 aa16.87■□□□□ 0.29
PUF60-220ENST00000532884 NUP133Q8WUM0 1156 aa16.87■□□□□ 0.29
PUF60-220ENST00000532884 DPF3Q92784 378 aa16.87■□□□□ 0.29
PUF60-220ENST00000532884 LRRC2Q9BYS8 371 aa16.87■□□□□ 0.29
PUF60-220ENST00000532884 CNPY2Q9Y2B0 182 aa16.87■□□□□ 0.29
PUF60-220ENST00000532884 ZNF236Q9UL36 1845 aa16.86■□□□□ 0.29
PUF60-220ENST00000532884 NFIBO00712 420 aa16.86■□□□□ 0.29
PUF60-220ENST00000532884 CDC37Q16543 378 aaPredicted RBP16.86■□□□□ 0.29
PUF60-220ENST00000532884 RASEFQ8IZ41 740 aa16.86■□□□□ 0.29
PUF60-220ENST00000532884 PURBQ96QR8 312 aaKnown RBP16.86■□□□□ 0.29
PUF60-220ENST00000532884 MYL10Q9BUA6 226 aa16.86■□□□□ 0.29
PUF60-220ENST00000532884 LY9Q9HBG7 655 aa16.86■□□□□ 0.29
PUF60-220ENST00000532884 CYP39A1Q9NYL5 469 aa16.86■□□□□ 0.29
PUF60-220ENST00000532884 MAD2L2Q9UI95 211 aa16.86■□□□□ 0.29
PUF60-220ENST00000532884 OGDHLQ9ULD0 1010 aa16.86■□□□□ 0.29
PUF60-220ENST00000532884 PTPDC1A2A3K4 754 aa16.85■□□□□ 0.29
PUF60-220ENST00000532884 BAATQ14032 418 aaPredicted RBP16.85■□□□□ 0.29
PUF60-220ENST00000532884 NECAB2Q7Z6G3 386 aa16.85■□□□□ 0.29
PUF60-220ENST00000532884 UBE2Q1Q7Z7E8 422 aa16.85■□□□□ 0.29
PUF60-220ENST00000532884 NEK1Q96PY6 1258 aa16.85■□□□□ 0.29
PUF60-220ENST00000532884 JMJD4Q9H9V9 463 aa16.85■□□□□ 0.29
PUF60-220ENST00000532884 ZHX1Q9UKY1 873 aaPredicted RBP16.85■□□□□ 0.29
PUF60-220ENST00000532884 DDX49Q9Y6V7 483 aaKnown RBP16.85■□□□□ 0.29
PUF60-220ENST00000532884 ZNFX1Q9P2E3 1918 aaKnown RBP16.85■□□□□ 0.29
PUF60-220ENST00000532884 PFASO15067 1338 aa16.85■□□□□ 0.29
PUF60-220ENST00000532884 PDE4DIPQ5VU43 2346 aa16.85■□□□□ 0.29
PUF60-220ENST00000532884 PALM3A6NDB9 673 aaPredicted RBP16.84■□□□□ 0.29
PUF60-220ENST00000532884 SOWAHBA6NEL2 793 aa16.84■□□□□ 0.29
PUF60-220ENST00000532884 CCDC69A6NI79 296 aa16.84■□□□□ 0.29
PUF60-220ENST00000532884 SEPT4O43236 478 aa16.84■□□□□ 0.29
PUF60-220ENST00000532884 MSCO60682 206 aa16.84■□□□□ 0.29
PUF60-220ENST00000532884 REC8O95072 547 aa16.84■□□□□ 0.29
PUF60-220ENST00000532884 SNAI1O95863 264 aaPredicted RBP16.84■□□□□ 0.29
PUF60-220ENST00000532884 CALML3P27482 149 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms