RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 PTPREP23469 700 aa16.97■□□□□ 0.31
PCDHA3-202ENST00000532566 CASP14P31944 242 aa16.97■□□□□ 0.31
PCDHA3-202ENST00000532566 RNASE9P60153 205 aaKnown RBP16.97■□□□□ 0.31
PCDHA3-202ENST00000532566 DNAJC21Q5F1R6 531 aaKnown RBP16.97■□□□□ 0.31
PCDHA3-202ENST00000532566 MSL1Q68DK7 614 aa16.97■□□□□ 0.31
PCDHA3-202ENST00000532566 MINPP1Q9UNW1 487 aa16.97■□□□□ 0.31
PCDHA3-202ENST00000532566 DIP2BQ9P265 1576 aa16.97■□□□□ 0.31
PCDHA3-202ENST00000532566 GABPB1Q06547 395 aaPredicted RBP16.97■□□□□ 0.31
PCDHA3-202ENST00000532566 SEL1L2Q5TEA6 688 aa16.97■□□□□ 0.31
PCDHA3-202ENST00000532566 CCDC50Q8IVM0 306 aa16.97■□□□□ 0.31
PCDHA3-202ENST00000532566 EEF2KMTQ96G04 330 aa16.97■□□□□ 0.31
PCDHA3-202ENST00000532566 ZFP91Q96JP5 570 aaPredicted RBP16.97■□□□□ 0.31
PCDHA3-202ENST00000532566 PLA2G12BQ9BX93 195 aa16.97■□□□□ 0.31
PCDHA3-202ENST00000532566 STMN4Q9H169 189 aaPredicted RBP16.97■□□□□ 0.31
PCDHA3-202ENST00000532566 CEP83Q9Y592 693 aa16.97■□□□□ 0.31
PCDHA3-202ENST00000532566 PCDHB13Q9Y5F0 798 aa16.97■□□□□ 0.31
PCDHA3-202ENST00000532566 ZNF609O15014 1411 aa16.97■□□□□ 0.31
PCDHA3-202ENST00000532566 XRCC5P13010 732 aaKnown RBP16.97■□□□□ 0.31
PCDHA3-202ENST00000532566 GRIPAP1Q4V328 841 aa16.97■□□□□ 0.31
PCDHA3-202ENST00000532566 NIM1KQ8IY84 436 aa16.97■□□□□ 0.31
PCDHA3-202ENST00000532566 TRIM58Q8NG06 486 aa16.97■□□□□ 0.31
PCDHA3-202ENST00000532566 KIFAP3Q92845 792 aa16.97■□□□□ 0.31
PCDHA3-202ENST00000532566 ARMCX3Q9UH62 379 aaPredicted RBP16.97■□□□□ 0.31
PCDHA3-202ENST00000532566 ARHGEF28Q8N1W1 1705 aaKnown RBP16.97■□□□□ 0.31
PCDHA3-202ENST00000532566 COL15A1P39059 1388 aa16.97■□□□□ 0.31
PCDHA3-202ENST00000532566 UTYO14607 1347 aa16.97■□□□□ 0.31
PCDHA3-202ENST00000532566 SPOPO43791 374 aa16.97■□□□□ 0.31
PCDHA3-202ENST00000532566 PLEKHA8P1O95397 391 aa16.97■□□□□ 0.31
PCDHA3-202ENST00000532566 TTLL1O95922 423 aa16.97■□□□□ 0.31
PCDHA3-202ENST00000532566 EEF1GP26641 437 aaKnown RBP16.97■□□□□ 0.31
PCDHA3-202ENST00000532566 EPSTI1Q96J88 318 aa16.97■□□□□ 0.31
PCDHA3-202ENST00000532566 IFT74Q96LB3 600 aa16.97■□□□□ 0.31
PCDHA3-202ENST00000532566 TUBGCP2Q9BSJ2 902 aa16.97■□□□□ 0.31
PCDHA3-202ENST00000532566 IL25Q9H293 177 aa16.97■□□□□ 0.31
PCDHA3-202ENST00000532566 LY9Q9HBG7 655 aa16.97■□□□□ 0.31
PCDHA3-202ENST00000532566 INCENPQ9NQS7 918 aa16.97■□□□□ 0.31
PCDHA3-202ENST00000532566 PANK4Q9NVE7 773 aa16.97■□□□□ 0.31
PCDHA3-202ENST00000532566 CALCOCO2Q13137 446 aa16.96■□□□□ 0.31
PCDHA3-202ENST00000532566 WDR44Q5JSH3 913 aa16.96■□□□□ 0.31
PCDHA3-202ENST00000532566 TMTC3Q6ZXV5 915 aa16.96■□□□□ 0.31
PCDHA3-202ENST00000532566 FMR1NBQ8N0W7 255 aaPredicted RBP16.96■□□□□ 0.31
PCDHA3-202ENST00000532566 EBAG9O00559 213 aa16.96■□□□□ 0.31
PCDHA3-202ENST00000532566 ZBED4O75132 1171 aa16.96■□□□□ 0.31
PCDHA3-202ENST00000532566 RCAN1P53805 252 aa16.96■□□□□ 0.31
PCDHA3-202ENST00000532566 EXOSC10Q01780 885 aaKnown RBP16.96■□□□□ 0.31
PCDHA3-202ENST00000532566 RESP18Q5W5W9 173 aa16.96■□□□□ 0.31
PCDHA3-202ENST00000532566 TMED8Q6PL24 325 aaPredicted RBP16.96■□□□□ 0.31
PCDHA3-202ENST00000532566 CNKSR1Q969H4 720 aa16.96■□□□□ 0.31
PCDHA3-202ENST00000532566 DHTKD1Q96HY7 919 aaPredicted RBP16.96■□□□□ 0.31
PCDHA3-202ENST00000532566 NARFQ9UHQ1 456 aa16.96■□□□□ 0.31
PCDHA3-202ENST00000532566 CPDO75976 1380 aa16.96■□□□□ 0.31
PCDHA3-202ENST00000532566 CEP170BQ9Y4F5 1589 aaPredicted RBP16.96■□□□□ 0.31
PCDHA3-202ENST00000532566 FOSP01100 380 aaPredicted RBP16.96■□□□□ 0.31
PCDHA3-202ENST00000532566 MYL1P05976 194 aa16.96■□□□□ 0.31
PCDHA3-202ENST00000532566 PRDX5P30044 214 aa16.96■□□□□ 0.31
PCDHA3-202ENST00000532566 CDC25AP30304 524 aa16.96■□□□□ 0.31
PCDHA3-202ENST00000532566 PLCB3Q01970 1234 aa16.96■□□□□ 0.31
PCDHA3-202ENST00000532566 PDIA6Q15084 440 aa16.96■□□□□ 0.31
PCDHA3-202ENST00000532566 CFAP221Q4G0U5 840 aa16.96■□□□□ 0.31
PCDHA3-202ENST00000532566 IFT20Q8IY31 132 aa16.96■□□□□ 0.31
PCDHA3-202ENST00000532566 DHX37Q8IY37 1157 aaKnown RBP16.96■□□□□ 0.31
PCDHA3-202ENST00000532566 TBCKQ8TEA7 893 aa16.96■□□□□ 0.31
PCDHA3-202ENST00000532566 LARP4BQ92615 738 aaKnown RBP16.96■□□□□ 0.31
PCDHA3-202ENST00000532566 LSM14BQ9BX40 385 aaKnown RBP16.96■□□□□ 0.31
PCDHA3-202ENST00000532566 IKBKGQ9Y6K9 419 aa16.96■□□□□ 0.31
PCDHA3-202ENST00000532566 ATP1A3P13637 1013 aa16.96■□□□□ 0.3
PCDHA3-202ENST00000532566 ZNF658Q5TYW1 1059 aaPredicted RBP16.96■□□□□ 0.3
PCDHA3-202ENST00000532566 GSTA5Q7RTV2 222 aa16.96■□□□□ 0.3
PCDHA3-202ENST00000532566 AMNQ9BXJ7 453 aa16.96■□□□□ 0.3
PCDHA3-202ENST00000532566 TLDC2A0PJX2 215 aa16.95■□□□□ 0.3
PCDHA3-202ENST00000532566 hCG_1984214I3L0E3 225 aa16.95■□□□□ 0.3
PCDHA3-202ENST00000532566 ZEB2O60315 1214 aa16.95■□□□□ 0.3
PCDHA3-202ENST00000532566 KRT5P13647 590 aa16.95■□□□□ 0.3
PCDHA3-202ENST00000532566 BRD3Q15059 726 aa16.95■□□□□ 0.3
PCDHA3-202ENST00000532566 ZNF713Q8N859 430 aaPredicted RBP16.95■□□□□ 0.3
PCDHA3-202ENST00000532566 CNOT6LQ96LI5 555 aaKnown RBP16.95■□□□□ 0.3
PCDHA3-202ENST00000532566 HOMER2Q9NSB8 354 aa16.95■□□□□ 0.3
PCDHA3-202ENST00000532566 SAMSN1Q9NSI8 373 aaKnown RBP16.95■□□□□ 0.3
PCDHA3-202ENST00000532566 TMOD4Q9NZQ9 345 aa16.95■□□□□ 0.3
PCDHA3-202ENST00000532566 ATP2A1O14983 1001 aa16.95■□□□□ 0.3
PCDHA3-202ENST00000532566 CEP104O60308 925 aa16.95■□□□□ 0.3
PCDHA3-202ENST00000532566 RPS6KA1Q15418 735 aa16.95■□□□□ 0.3
PCDHA3-202ENST00000532566 SGMS1Q86VZ5 419 aa16.95■□□□□ 0.3
PCDHA3-202ENST00000532566 VSTM4Q8IW00 320 aa16.95■□□□□ 0.3
PCDHA3-202ENST00000532566 PIGSQ96S52 555 aa16.95■□□□□ 0.3
PCDHA3-202ENST00000532566 GOLPH3LQ9H4A5 285 aa16.95■□□□□ 0.3
PCDHA3-202ENST00000532566 A0A1W2PRG0 241 aa16.95■□□□□ 0.3
PCDHA3-202ENST00000532566 GSG1L2A8MUP6 293 aa16.95■□□□□ 0.3
PCDHA3-202ENST00000532566 ABCB5Q2M3G0 1257 aa16.95■□□□□ 0.3
PCDHA3-202ENST00000532566 ARL6IP4Q66PJ3 421 aaKnown RBP16.95■□□□□ 0.3
PCDHA3-202ENST00000532566 USP17L2Q6R6M4 530 aa16.95■□□□□ 0.3
PCDHA3-202ENST00000532566 FERMT1Q9BQL6 677 aa16.95■□□□□ 0.3
PCDHA3-202ENST00000532566 USP17L3A6NCW0 530 aa16.94■□□□□ 0.3
PCDHA3-202ENST00000532566 USP17L4A6NCW7 530 aa16.94■□□□□ 0.3
PCDHA3-202ENST00000532566 TMEM232C9JQI7 657 aa16.94■□□□□ 0.3
PCDHA3-202ENST00000532566 USP17L1Q7RTZ2 530 aa16.94■□□□□ 0.3
PCDHA3-202ENST00000532566 CELF1Q92879 486 aaKnown RBP16.94■□□□□ 0.3
PCDHA3-202ENST00000532566 HOOK2Q96ED9 719 aa16.94■□□□□ 0.3
PCDHA3-202ENST00000532566 COBLO75128 1261 aa16.94■□□□□ 0.3
PCDHA3-202ENST00000532566 CDC27P30260 824 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms