RNA–Protein interactions for RNA: ENST00000532538.1

BRPF3-210, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 4

Gene BRPF3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-210ENST00000532538 GMCL1P1Q8NEA9 526 aa18.04■□□□□ 0.48
BRPF3-210ENST00000532538 NEDD1Q8NHV4 660 aa18.04■□□□□ 0.48
BRPF3-210ENST00000532538 MKL1Q969V6 931 aa18.04■□□□□ 0.48
BRPF3-210ENST00000532538 SEMA6BQ9H3T3 888 aa18.04■□□□□ 0.48
BRPF3-210ENST00000532538 STX8Q9UNK0 236 aa18.04■□□□□ 0.48
BRPF3-210ENST00000532538 DNAJC25-GNG10A0A024R161 153 aa18.03■□□□□ 0.48
BRPF3-210ENST00000532538 KIAA0355O15063 1070 aa18.03■□□□□ 0.48
BRPF3-210ENST00000532538 FDX1P10109 184 aa18.03■□□□□ 0.48
BRPF3-210ENST00000532538 ITGB8P26012 769 aa18.03■□□□□ 0.48
BRPF3-210ENST00000532538 OAZ1P54368 228 aa18.03■□□□□ 0.48
BRPF3-210ENST00000532538 PPP4R3BQ5MIZ7 849 aa18.03■□□□□ 0.48
BRPF3-210ENST00000532538 CCDC174Q6PII3 467 aa18.03■□□□□ 0.48
BRPF3-210ENST00000532538 ZNF467Q7Z7K2 595 aaPredicted RBP18.03■□□□□ 0.48
BRPF3-210ENST00000532538 FAM160B2Q86V87 743 aa18.03■□□□□ 0.48
BRPF3-210ENST00000532538 MYLIPQ8WY64 445 aa18.03■□□□□ 0.48
BRPF3-210ENST00000532538 ACAD9Q9H845 621 aa18.03■□□□□ 0.48
BRPF3-210ENST00000532538 TOMM22Q9NS69 142 aa18.03■□□□□ 0.48
BRPF3-210ENST00000532538 COL6A3P12111 3177 aa18.02■□□□□ 0.48
BRPF3-210ENST00000532538 MYADML2A6NDP7 307 aa18.02■□□□□ 0.48
BRPF3-210ENST00000532538 TLR3O15455 904 aaKnown RBP18.02■□□□□ 0.48
BRPF3-210ENST00000532538 ASGR1P07306 291 aa18.02■□□□□ 0.48
BRPF3-210ENST00000532538 ALAS1P13196 640 aa18.02■□□□□ 0.48
BRPF3-210ENST00000532538 MCCP23508 829 aa18.02■□□□□ 0.48
BRPF3-210ENST00000532538 FAAP100Q0VG06 881 aa18.02■□□□□ 0.48
BRPF3-210ENST00000532538 CCDC144CPQ8IYA2 1237 aa18.02■□□□□ 0.48
BRPF3-210ENST00000532538 MAFAQ8NHW3 353 aaPredicted RBP18.02■□□□□ 0.48
BRPF3-210ENST00000532538 RNF146Q9NTX7 359 aa18.02■□□□□ 0.48
BRPF3-210ENST00000532538 SYNPO2Q9UMS6 1093 aa18.02■□□□□ 0.48
BRPF3-210ENST00000532538 RANBP6O60518 1105 aaKnown RBP18.01■□□□□ 0.47
BRPF3-210ENST00000532538 FOSL2P15408 326 aa18.01■□□□□ 0.47
BRPF3-210ENST00000532538 MX1P20591 662 aa18.01■□□□□ 0.47
BRPF3-210ENST00000532538 CNTN2Q02246 1040 aa18.01■□□□□ 0.47
BRPF3-210ENST00000532538 CTDSPL2Q05D32 466 aa18.01■□□□□ 0.47
BRPF3-210ENST00000532538 CCDC129Q6ZRS4 1044 aa18.01■□□□□ 0.47
BRPF3-210ENST00000532538 KCTD1Q719H9 257 aa18.01■□□□□ 0.47
BRPF3-210ENST00000532538 ANKRD33Q7Z3H0 272 aa18.01■□□□□ 0.47
BRPF3-210ENST00000532538 KLHDC9Q8NEP7 349 aa18.01■□□□□ 0.47
BRPF3-210ENST00000532538 STAG1Q8WVM7 1258 aa18.01■□□□□ 0.47
BRPF3-210ENST00000532538 AGBL1Q96MI9 1066 aa18.01■□□□□ 0.47
BRPF3-210ENST00000532538 TOX2Q96NM4 488 aa18.01■□□□□ 0.47
BRPF3-210ENST00000532538 A0A0U1RQG5 324 aaPredicted RBP18■□□□□ 0.47
BRPF3-210ENST00000532538 EPHB4P54760 987 aa18■□□□□ 0.47
BRPF3-210ENST00000532538 SNAP25P60880 206 aa18■□□□□ 0.47
BRPF3-210ENST00000532538 IRX5P78411 483 aaPredicted RBP18■□□□□ 0.47
BRPF3-210ENST00000532538 TNFAIP2Q03169 654 aa18■□□□□ 0.47
BRPF3-210ENST00000532538 CCDC96Q2M329 555 aa18■□□□□ 0.47
BRPF3-210ENST00000532538 ZMYM1Q5SVZ6 1142 aa18■□□□□ 0.47
BRPF3-210ENST00000532538 OTUD7AQ8TE49 926 aaPredicted RBP18■□□□□ 0.47
BRPF3-210ENST00000532538 TRERF1Q96PN7 1200 aa18■□□□□ 0.47
BRPF3-210ENST00000532538 PPP1R12CQ9BZL4 782 aa18■□□□□ 0.47
BRPF3-210ENST00000532538 MYO9BQ13459 2157 aa18■□□□□ 0.47
BRPF3-210ENST00000532538 ELP1O95163 1332 aa17.99■□□□□ 0.47
BRPF3-210ENST00000532538 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.99■□□□□ 0.47
BRPF3-210ENST00000532538 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.99■□□□□ 0.47
BRPF3-210ENST00000532538 ASB14A6NK59 587 aa17.99■□□□□ 0.47
BRPF3-210ENST00000532538 TIMP1P01033 207 aa17.99■□□□□ 0.47
BRPF3-210ENST00000532538 BEX3Q00994 111 aa17.99■□□□□ 0.47
BRPF3-210ENST00000532538 PPIGQ13427 754 aaKnown RBP eCLIP17.99■□□□□ 0.47
BRPF3-210ENST00000532538 RRP12Q5JTH9 1297 aaKnown RBP17.99■□□□□ 0.47
BRPF3-210ENST00000532538 PI4K2BQ8TCG2 481 aa17.99■□□□□ 0.47
BRPF3-210ENST00000532538 COL25A1Q9BXS0 654 aaPredicted RBP17.99■□□□□ 0.47
BRPF3-210ENST00000532538 AP5M1Q9H0R1 490 aa17.99■□□□□ 0.47
BRPF3-210ENST00000532538 PLIN4Q96Q06 1357 aa17.99■□□□□ 0.47
BRPF3-210ENST00000532538 ARVCFO00192 962 aa17.98■□□□□ 0.47
BRPF3-210ENST00000532538 CST5P28325 142 aaPredicted RBP17.98■□□□□ 0.47
BRPF3-210ENST00000532538 GJA9P57773 515 aa17.98■□□□□ 0.47
BRPF3-210ENST00000532538 TKFCQ3LXA3 575 aa17.98■□□□□ 0.47
BRPF3-210ENST00000532538 ANKRD45Q5TZF3 282 aa17.98■□□□□ 0.47
BRPF3-210ENST00000532538 RCSD1Q6JBY9 416 aa17.98■□□□□ 0.47
BRPF3-210ENST00000532538 NSMFQ6X4W1 530 aa17.98■□□□□ 0.47
BRPF3-210ENST00000532538 EEPD1Q7L9B9 569 aa17.98■□□□□ 0.47
BRPF3-210ENST00000532538 TMEM199Q8N511 208 aa17.98■□□□□ 0.47
BRPF3-210ENST00000532538 GMCL1Q96IK5 515 aa17.98■□□□□ 0.47
BRPF3-210ENST00000532538 TTYH1Q9H313 450 aaPredicted RBP17.98■□□□□ 0.47
BRPF3-210ENST00000532538 INCENPQ9NQS7 918 aa17.98■□□□□ 0.47
BRPF3-210ENST00000532538 PCDHB15Q9Y5E8 787 aa17.98■□□□□ 0.47
BRPF3-210ENST00000532538 ADCY6O43306 1168 aa17.97■□□□□ 0.47
BRPF3-210ENST00000532538 ZEB2O60315 1214 aa17.97■□□□□ 0.47
BRPF3-210ENST00000532538 MFSD5Q6N075 450 aa17.97■□□□□ 0.47
BRPF3-210ENST00000532538 UPF3AQ9H1J1 476 aaKnown RBP17.97■□□□□ 0.47
BRPF3-210ENST00000532538 A1CFQ9NQ94 594 aaKnown RBP17.97■□□□□ 0.47
BRPF3-210ENST00000532538 CCPG1Q9ULG6 757 aa17.97■□□□□ 0.47
BRPF3-210ENST00000532538 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.96■□□□□ 0.47
BRPF3-210ENST00000532538 NMT2O60551 498 aa17.96■□□□□ 0.47
BRPF3-210ENST00000532538 DNAJB2P25686 324 aa17.96■□□□□ 0.47
BRPF3-210ENST00000532538 CCSAPQ6IQ19 270 aaPredicted RBP17.96■□□□□ 0.47
BRPF3-210ENST00000532538 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.96■□□□□ 0.47
BRPF3-210ENST00000532538 TLK2Q86UE8 772 aa17.96■□□□□ 0.47
BRPF3-210ENST00000532538 FAM133AQ8N9E0 248 aa17.96■□□□□ 0.47
BRPF3-210ENST00000532538 FGD4Q96M96 766 aa17.96■□□□□ 0.47
BRPF3-210ENST00000532538 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.96■□□□□ 0.479e-7■□□□□ 10.7
BRPF3-210ENST00000532538 PRR12Q9ULL5 1215 aa17.96■□□□□ 0.47
BRPF3-210ENST00000532538 GBF1Q92538 1859 aa17.96■□□□□ 0.47
BRPF3-210ENST00000532538 TMEM265A0A087WTH1 108 aa17.95■□□□□ 0.46
BRPF3-210ENST00000532538 DYNC1LI2O43237 492 aaPredicted RBP17.95■□□□□ 0.46
BRPF3-210ENST00000532538 ACRP10323 421 aa17.95■□□□□ 0.46
BRPF3-210ENST00000532538 CSF2RAP15509 400 aa17.95■□□□□ 0.46
BRPF3-210ENST00000532538 CXCL17Q6UXB2 119 aa17.95■□□□□ 0.46
BRPF3-210ENST00000532538 EVI5LQ96CN4 794 aa17.95■□□□□ 0.46
BRPF3-210ENST00000532538 TBX21Q9UL17 535 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms