RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 FCER1AP12319 257 aa16.31■□□□□ 0.2
TSPAN4-220ENST00000532375 TAL1P17542 331 aaPredicted RBP16.31■□□□□ 0.2
TSPAN4-220ENST00000532375 COPB2P35606 906 aa16.31■□□□□ 0.2
TSPAN4-220ENST00000532375 LIFRP42702 1097 aa16.31■□□□□ 0.2
TSPAN4-220ENST00000532375 SOX10P56693 466 aa16.31■□□□□ 0.2
TSPAN4-220ENST00000532375 IKQ13123 557 aaPredicted RBP16.31■□□□□ 0.2
TSPAN4-220ENST00000532375 WTAPQ15007 396 aa16.31■□□□□ 0.2
TSPAN4-220ENST00000532375 ZNF792Q3KQV3 632 aa16.31■□□□□ 0.2
TSPAN4-220ENST00000532375 ASPRV1Q53RT3 343 aa16.31■□□□□ 0.2
TSPAN4-220ENST00000532375 TMEM87BQ96K49 555 aa16.31■□□□□ 0.2
TSPAN4-220ENST00000532375 ISY1Q9ULR0 285 aaKnown RBP16.31■□□□□ 0.2
TSPAN4-220ENST00000532375 IVNS1ABPQ9Y6Y0 642 aa16.31■□□□□ 0.2
TSPAN4-220ENST00000532375 HMGCRP04035 888 aa16.3■□□□□ 0.2
TSPAN4-220ENST00000532375 ICAM1P05362 532 aa16.3■□□□□ 0.2
TSPAN4-220ENST00000532375 CCL5P13501 91 aa16.3■□□□□ 0.2
TSPAN4-220ENST00000532375 GRM4Q14833 912 aa16.3■□□□□ 0.2
TSPAN4-220ENST00000532375 CCDC174Q6PII3 467 aa16.3■□□□□ 0.2
TSPAN4-220ENST00000532375 CHST13Q8NET6 341 aa16.3■□□□□ 0.2
TSPAN4-220ENST00000532375 LRRC2Q9BYS8 371 aa16.3■□□□□ 0.2
TSPAN4-220ENST00000532375 UNC93B1Q9H1C4 597 aa16.3■□□□□ 0.2
TSPAN4-220ENST00000532375 WDR19Q8NEZ3 1342 aa16.29■□□□□ 0.2
TSPAN4-220ENST00000532375 MYCP01106 439 aaPredicted RBP16.29■□□□□ 0.2
TSPAN4-220ENST00000532375 PGK2P07205 417 aa16.29■□□□□ 0.2
TSPAN4-220ENST00000532375 PARP1P09874 1014 aaKnown RBP16.29■□□□□ 0.2
TSPAN4-220ENST00000532375 SART3Q15020 963 aaKnown RBP16.29■□□□□ 0.2
TSPAN4-220ENST00000532375 MUM1L1Q5H9M0 696 aa16.29■□□□□ 0.2
TSPAN4-220ENST00000532375 DHX32Q7L7V1 743 aaKnown RBP16.29■□□□□ 0.2
TSPAN4-220ENST00000532375 TRMT44Q8IYL2 757 aaKnown RBP16.29■□□□□ 0.2
TSPAN4-220ENST00000532375 ADGRF4Q8IZF3 695 aa16.29■□□□□ 0.2
TSPAN4-220ENST00000532375 MTMR8Q96EF0 704 aa16.29■□□□□ 0.2
TSPAN4-220ENST00000532375 FGD4Q96M96 766 aa16.29■□□□□ 0.2
TSPAN4-220ENST00000532375 MMP19Q99542 508 aa16.29■□□□□ 0.2
TSPAN4-220ENST00000532375 JMJD4Q9H9V9 463 aa16.29■□□□□ 0.2
TSPAN4-220ENST00000532375 CWC22Q9HCG8 908 aaKnown RBP16.29■□□□□ 0.2
TSPAN4-220ENST00000532375 PAK6Q9NQU5 681 aaPredicted RBP16.29■□□□□ 0.2
TSPAN4-220ENST00000532375 LCTP09848 1927 aa16.29■□□□□ 0.2
TSPAN4-220ENST00000532375 MYH6P13533 1939 aa16.29■□□□□ 0.2
TSPAN4-220ENST00000532375 ERICH2A1L162 156 aa16.28■□□□□ 0.2
TSPAN4-220ENST00000532375 CYTH3O43739 400 aa16.28■□□□□ 0.2
TSPAN4-220ENST00000532375 GJB1P08034 283 aa16.28■□□□□ 0.2
TSPAN4-220ENST00000532375 CPA1P15085 419 aa16.28■□□□□ 0.2
TSPAN4-220ENST00000532375 ZKSCAN1P17029 563 aaPredicted RBP16.28■□□□□ 0.2
TSPAN4-220ENST00000532375 UBXN2AP68543 259 aa16.28■□□□□ 0.2
TSPAN4-220ENST00000532375 CACNB2Q08289 660 aaPredicted RBP16.28■□□□□ 0.2
TSPAN4-220ENST00000532375 KRT32Q14532 448 aa16.28■□□□□ 0.2
TSPAN4-220ENST00000532375 TKFCQ3LXA3 575 aa16.28■□□□□ 0.2
TSPAN4-220ENST00000532375 OLFML2BQ68BL8 750 aa16.28■□□□□ 0.2
TSPAN4-220ENST00000532375 DPP9Q86TI2 863 aa16.28■□□□□ 0.2
TSPAN4-220ENST00000532375 SGMS1Q86VZ5 419 aa16.28■□□□□ 0.2
TSPAN4-220ENST00000532375 ZNF654Q8IZM8 581 aa16.28■□□□□ 0.2
TSPAN4-220ENST00000532375 CLEC4DQ8WXI8 215 aa16.28■□□□□ 0.2
TSPAN4-220ENST00000532375 MAML3Q96JK9 1138 aa16.28■□□□□ 0.2
TSPAN4-220ENST00000532375 TCEANC2Q96MN5 208 aa16.28■□□□□ 0.2
TSPAN4-220ENST00000532375 TRERF1Q96PN7 1200 aa16.28■□□□□ 0.2
TSPAN4-220ENST00000532375 MAP3K14Q99558 947 aa16.28■□□□□ 0.2
TSPAN4-220ENST00000532375 RNF146Q9NTX7 359 aa16.28■□□□□ 0.2
TSPAN4-220ENST00000532375 BIN2Q9UBW5 565 aaPredicted RBP16.28■□□□□ 0.2
TSPAN4-220ENST00000532375 DIS3Q9Y2L1 958 aaKnown RBP16.28■□□□□ 0.2
TSPAN4-220ENST00000532375 CTDP1Q9Y5B0 961 aaPredicted RBP16.28■□□□□ 0.2
TSPAN4-220ENST00000532375 RPTORQ8N122 1335 aa16.27■□□□□ 0.2
TSPAN4-220ENST00000532375 KLRF2D3W0D1 207 aa16.27■□□□□ 0.2
TSPAN4-220ENST00000532375 SEC24BO95487 1268 aa16.27■□□□□ 0.2
TSPAN4-220ENST00000532375 ALAS1P13196 640 aa16.27■□□□□ 0.2
TSPAN4-220ENST00000532375 EN2P19622 333 aaPredicted RBP16.27■□□□□ 0.2
TSPAN4-220ENST00000532375 SLC4A3P48751 1232 aa16.27■□□□□ 0.2
TSPAN4-220ENST00000532375 KCTD2Q14681 263 aa16.27■□□□□ 0.2
TSPAN4-220ENST00000532375 TMTC2Q8N394 836 aa16.27■□□□□ 0.2
TSPAN4-220ENST00000532375 TRPV1Q8NER1 839 aa16.27■□□□□ 0.2
TSPAN4-220ENST00000532375 SHISA4Q96DD7 197 aa16.27■□□□□ 0.2
TSPAN4-220ENST00000532375 RNF208Q9H0X6 261 aa16.27■□□□□ 0.2
TSPAN4-220ENST00000532375 RIOX1Q9H6W3 641 aa16.27■□□□□ 0.2
TSPAN4-220ENST00000532375 A1CFQ9NQ94 594 aaKnown RBP16.27■□□□□ 0.2
TSPAN4-220ENST00000532375 FBXO40Q9UH90 709 aa16.27■□□□□ 0.2
TSPAN4-220ENST00000532375 CCPG1Q9ULG6 757 aa16.27■□□□□ 0.2
TSPAN4-220ENST00000532375 MCM3APO60318 1980 aa16.26■□□□□ 0.19
TSPAN4-220ENST00000532375 PRKAR2AP13861 404 aaKnown RBP16.26■□□□□ 0.19
TSPAN4-220ENST00000532375 CYP2C19P33261 490 aa16.26■□□□□ 0.19
TSPAN4-220ENST00000532375 CATIPQ7Z7H3 387 aa16.26■□□□□ 0.19
TSPAN4-220ENST00000532375 FBXL16Q8N461 479 aa16.26■□□□□ 0.19
TSPAN4-220ENST00000532375 FAM133AQ8N9E0 248 aa16.26■□□□□ 0.19
TSPAN4-220ENST00000532375 MYL10Q9BUA6 226 aa16.26■□□□□ 0.19
TSPAN4-220ENST00000532375 AGXT2Q9BYV1 514 aa16.26■□□□□ 0.19
TSPAN4-220ENST00000532375 ACAD9Q9H845 621 aa16.26■□□□□ 0.19
TSPAN4-220ENST00000532375 HOMER2Q9NSB8 354 aa16.26■□□□□ 0.19
TSPAN4-220ENST00000532375 BRPF3Q9ULD4 1205 aa16.26■□□□□ 0.19
TSPAN4-220ENST00000532375 MKI67P46013 3256 aaKnown RBP16.26■□□□□ 0.19
TSPAN4-220ENST00000532375 ASTN1O14525 1302 aa16.25■□□□□ 0.19
TSPAN4-220ENST00000532375 NFIBO00712 420 aa16.25■□□□□ 0.19
TSPAN4-220ENST00000532375 PPP1R11O60927 126 aaPredicted RBP16.25■□□□□ 0.19
TSPAN4-220ENST00000532375 DDAH1O94760 285 aa16.25■□□□□ 0.19
TSPAN4-220ENST00000532375 CCND3P30281 292 aaPredicted RBP16.25■□□□□ 0.19
TSPAN4-220ENST00000532375 GJA8P48165 433 aa16.25■□□□□ 0.19
TSPAN4-220ENST00000532375 CDC37Q16543 378 aaPredicted RBP16.25■□□□□ 0.19
TSPAN4-220ENST00000532375 QRICH1Q2TAL8 776 aa16.25■□□□□ 0.19
TSPAN4-220ENST00000532375 MAMDC4Q6UXC1 1216 aa16.25■□□□□ 0.19
TSPAN4-220ENST00000532375 JAKMIP1Q96N16 626 aaKnown RBP16.25■□□□□ 0.19
TSPAN4-220ENST00000532375 TMEM106CQ9BVX2 250 aa16.25■□□□□ 0.19
TSPAN4-220ENST00000532375 CRISPLD2Q9H0B8 497 aa16.25■□□□□ 0.19
TSPAN4-220ENST00000532375 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.25■□□□□ 0.193e-6■■■■□ 23.5
TSPAN4-220ENST00000532375 VAT1LQ9HCJ6 419 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms