RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 MYO3BQ8WXR4 1341 aa17.26■□□□□ 0.35
SRPRA-206ENST00000532259 SPDYE2BA6NHP3 402 aa17.26■□□□□ 0.35
SRPRA-206ENST00000532259 OFD1O75665 1012 aa17.26■□□□□ 0.35
SRPRA-206ENST00000532259 SLFN14P0C7P3 912 aa17.26■□□□□ 0.35
SRPRA-206ENST00000532259 SPDYE6P0CI01 402 aa17.26■□□□□ 0.35
SRPRA-206ENST00000532259 MYL5Q02045 173 aa17.26■□□□□ 0.35
SRPRA-206ENST00000532259 TATDN1Q6P1N9 297 aa17.26■□□□□ 0.35
SRPRA-206ENST00000532259 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.26■□□□□ 0.35
SRPRA-206ENST00000532259 MRFAP1L1Q96HT8 127 aa17.26■□□□□ 0.35
SRPRA-206ENST00000532259 UIMC1Q96RL1 719 aa17.26■□□□□ 0.35
SRPRA-206ENST00000532259 GMLQ99445 158 aa17.26■□□□□ 0.35
SRPRA-206ENST00000532259 PSMD1Q99460 953 aa17.26■□□□□ 0.35
SRPRA-206ENST00000532259 GREB1LQ9C091 1923 aaPredicted RBP17.25■□□□□ 0.35
SRPRA-206ENST00000532259 SMTNL1A8MU46 457 aa17.25■□□□□ 0.35
SRPRA-206ENST00000532259 GH2P01242 217 aa17.25■□□□□ 0.35
SRPRA-206ENST00000532259 TAL1P17542 331 aaPredicted RBP17.25■□□□□ 0.35
SRPRA-206ENST00000532259 UBE2SQ16763 222 aa17.25■□□□□ 0.35
SRPRA-206ENST00000532259 TBCKQ8TEA7 893 aa17.25■□□□□ 0.35
SRPRA-206ENST00000532259 DPF2Q92785 391 aa17.25■□□□□ 0.35
SRPRA-206ENST00000532259 MED15Q96RN5 788 aa17.25■□□□□ 0.35
SRPRA-206ENST00000532259 MORC2Q9Y6X9 1032 aaPredicted RBP17.25■□□□□ 0.35
SRPRA-206ENST00000532259 VIL1P09327 827 aaKnown RBP17.25■□□□□ 0.35
SRPRA-206ENST00000532259 STX17P56962 302 aa17.25■□□□□ 0.35
SRPRA-206ENST00000532259 TPM4P67936 248 aa17.25■□□□□ 0.35
SRPRA-206ENST00000532259 E2F4Q16254 413 aa17.25■□□□□ 0.35
SRPRA-206ENST00000532259 DTHD1Q6ZMT9 781 aa17.25■□□□□ 0.35
SRPRA-206ENST00000532259 CCDC17Q96LX7 622 aa17.25■□□□□ 0.35
SRPRA-206ENST00000532259 EDIL3O43854 480 aa17.24■□□□□ 0.35
SRPRA-206ENST00000532259 SERPINC1P01008 464 aa17.24■□□□□ 0.35
SRPRA-206ENST00000532259 SMARCA1P28370 1054 aa17.24■□□□□ 0.35
SRPRA-206ENST00000532259 GNA11P29992 359 aa17.24■□□□□ 0.35
SRPRA-206ENST00000532259 FANCCQ00597 558 aa17.24■□□□□ 0.35
SRPRA-206ENST00000532259 ICA1Q05084 483 aa17.24■□□□□ 0.35
SRPRA-206ENST00000532259 NONOQ15233 471 aaKnown RBP eCLIP17.24■□□□□ 0.35
SRPRA-206ENST00000532259 GALNT17Q6IS24 598 aa17.24■□□□□ 0.35
SRPRA-206ENST00000532259 REXO1Q8N1G1 1221 aaKnown RBP17.24■□□□□ 0.35
SRPRA-206ENST00000532259 CCDC12Q8WUD4 166 aaPredicted RBP17.24■□□□□ 0.35
SRPRA-206ENST00000532259 VEZTQ9HBM0 779 aa17.24■□□□□ 0.35
SRPRA-206ENST00000532259 MORC3Q14149 939 aa17.24■□□□□ 0.35
SRPRA-206ENST00000532259 ABCB5Q2M3G0 1257 aa17.24■□□□□ 0.35
SRPRA-206ENST00000532259 NT5DC1Q5TFE4 455 aa17.24■□□□□ 0.35
SRPRA-206ENST00000532259 TMC6Q7Z403 805 aa17.24■□□□□ 0.35
SRPRA-206ENST00000532259 SH3RF1Q7Z6J0 888 aa17.24■□□□□ 0.35
SRPRA-206ENST00000532259 KIAA1524Q8TCG1 905 aa17.24■□□□□ 0.35
SRPRA-206ENST00000532259 LRRC15Q8TF66 581 aa17.24■□□□□ 0.35
SRPRA-206ENST00000532259 A0A1W2PRG0 241 aa17.23■□□□□ 0.35
SRPRA-206ENST00000532259 SLC1A4P43007 532 aa17.23■□□□□ 0.35
SRPRA-206ENST00000532259 DLGAP5Q15398 846 aa17.23■□□□□ 0.35
SRPRA-206ENST00000532259 SLFN13Q68D06 897 aa17.23■□□□□ 0.35
SRPRA-206ENST00000532259 KANK3Q6NY19 840 aa17.23■□□□□ 0.35
SRPRA-206ENST00000532259 SPICE1Q8N0Z3 855 aa17.23■□□□□ 0.35
SRPRA-206ENST00000532259 SPATA20Q8TB22 786 aa17.23■□□□□ 0.35
SRPRA-206ENST00000532259 KANSL2Q9H9L4 492 aa17.23■□□□□ 0.35
SRPRA-206ENST00000532259 ZNF70Q9UC06 446 aaPredicted RBP17.23■□□□□ 0.35
SRPRA-206ENST00000532259 CDC25BP30305 580 aa17.23■□□□□ 0.35
SRPRA-206ENST00000532259 CXCL9Q07325 125 aa17.23■□□□□ 0.35
SRPRA-206ENST00000532259 CUL4BQ13620 913 aa17.23■□□□□ 0.35
SRPRA-206ENST00000532259 PDXDC2PQ6P474 469 aa17.23■□□□□ 0.35
SRPRA-206ENST00000532259 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.23■□□□□ 0.35
SRPRA-206ENST00000532259 IQUBQ8NA54 791 aa17.23■□□□□ 0.35
SRPRA-206ENST00000532259 SLC16A10Q8TF71 515 aa17.23■□□□□ 0.35
SRPRA-206ENST00000532259 TMEM39BQ9GZU3 492 aa17.23■□□□□ 0.35
SRPRA-206ENST00000532259 IKBKBO14920 756 aa17.22■□□□□ 0.35
SRPRA-206ENST00000532259 TPM3P06753 285 aa17.22■□□□□ 0.35
SRPRA-206ENST00000532259 CD44P16070 742 aaKnown RBP17.22■□□□□ 0.35
SRPRA-206ENST00000532259 TNNI2P48788 182 aa17.22■□□□□ 0.35
SRPRA-206ENST00000532259 ARL6IP4Q66PJ3 421 aaKnown RBP17.22■□□□□ 0.35
SRPRA-206ENST00000532259 MIGA2Q7L4E1 593 aa17.22■□□□□ 0.35
SRPRA-206ENST00000532259 ELOA2Q8IYF1 753 aaPredicted RBP17.22■□□□□ 0.35
SRPRA-206ENST00000532259 PIM2Q9P1W9 311 aa17.22■□□□□ 0.35
SRPRA-206ENST00000532259 NFE2L3Q9Y4A8 694 aa17.22■□□□□ 0.35
SRPRA-206ENST00000532259 PNMA6FA0A0J9YX94 578 aa17.22■□□□□ 0.35
SRPRA-206ENST00000532259 ENTPD3O75355 529 aa17.22■□□□□ 0.35
SRPRA-206ENST00000532259 STAT6P42226 847 aa17.22■□□□□ 0.35
SRPRA-206ENST00000532259 TECP42680 631 aa17.22■□□□□ 0.35
SRPRA-206ENST00000532259 ECE1P42892 770 aa17.22■□□□□ 0.35
SRPRA-206ENST00000532259 ADCY7P51828 1080 aa17.22■□□□□ 0.35
SRPRA-206ENST00000532259 DPYDQ12882 1025 aa17.22■□□□□ 0.35
SRPRA-206ENST00000532259 IKQ13123 557 aaPredicted RBP17.22■□□□□ 0.35
SRPRA-206ENST00000532259 KRT25Q7Z3Z0 450 aa17.22■□□□□ 0.35
SRPRA-206ENST00000532259 NEK8Q86SG6 692 aa17.22■□□□□ 0.35
SRPRA-206ENST00000532259 POTEDQ86YR6 584 aa17.22■□□□□ 0.35
SRPRA-206ENST00000532259 OGFOD1Q8N543 542 aa17.22■□□□□ 0.35
SRPRA-206ENST00000532259 GJA10Q969M2 543 aa17.22■□□□□ 0.35
SRPRA-206ENST00000532259 MAPK8IP1Q9UQF2 711 aa17.22■□□□□ 0.35
SRPRA-206ENST00000532259 F5H6K3 240 aa17.21■□□□□ 0.35
SRPRA-206ENST00000532259 NPM3O75607 178 aaKnown RBP17.21■□□□□ 0.35
SRPRA-206ENST00000532259 TDP2O95551 362 aa17.21■□□□□ 0.35
SRPRA-206ENST00000532259 EGFRP00533 1210 aa17.21■□□□□ 0.35
SRPRA-206ENST00000532259 UBASH3AP57075 661 aa17.21■□□□□ 0.35
SRPRA-206ENST00000532259 KLRC3Q07444 240 aa17.21■□□□□ 0.35
SRPRA-206ENST00000532259 NBPF9Q3BBW0 867 aa17.21■□□□□ 0.35
SRPRA-206ENST00000532259 GPATCH4Q5T3I0 446 aaKnown RBP17.21■□□□□ 0.35
SRPRA-206ENST00000532259 LRRC8AQ8IWT6 810 aa17.21■□□□□ 0.35
SRPRA-206ENST00000532259 NIM1KQ8IY84 436 aa17.21■□□□□ 0.35
SRPRA-206ENST00000532259 SAMSN1Q9NSI8 373 aaKnown RBP17.21■□□□□ 0.35
SRPRA-206ENST00000532259 NYAP2Q9P242 653 aa17.21■□□□□ 0.35
SRPRA-206ENST00000532259 ZNRF3Q9ULT6 936 aa17.21■□□□□ 0.35
SRPRA-206ENST00000532259 CNTNAP1P78357 1384 aa17.21■□□□□ 0.35
SRPRA-206ENST00000532259 ATRNL1Q5VV63 1379 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms