RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 FASTKD5Q7L8L6 764 aaKnown RBP6.88□□□□□ -1.31
HMGB1P42-201ENST00000532126 CCDC84Q86UT8 332 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P42-201ENST00000532126 FAM43AQ8N2R8 423 aa6.88□□□□□ -1.31
HMGB1P42-201ENST00000532126 ZNF280CQ8ND82 737 aa6.88□□□□□ -1.31
HMGB1P42-201ENST00000532126 PRIMPOLQ96LW4 560 aa6.88□□□□□ -1.31
HMGB1P42-201ENST00000532126 SEC62Q99442 399 aaKnown RBP6.88□□□□□ -1.31
HMGB1P42-201ENST00000532126 CFHR5Q9BXR6 569 aa6.88□□□□□ -1.31
HMGB1P42-201ENST00000532126 NACAP1Q9BZK3 213 aa6.88□□□□□ -1.31
HMGB1P42-201ENST00000532126 NBPF3Q9H094 633 aa6.88□□□□□ -1.31
HMGB1P42-201ENST00000532126 OSBPL2Q9H1P3 480 aa6.88□□□□□ -1.31
HMGB1P42-201ENST00000532126 AS3MTQ9HBK9 375 aa6.88□□□□□ -1.31
HMGB1P42-201ENST00000532126 GINM1Q9NU53 330 aa6.88□□□□□ -1.31
HMGB1P42-201ENST00000532126 ARPP21Q9UBL0 812 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P42-201ENST00000532126 VTI1BQ9UEU0 232 aa6.88□□□□□ -1.31
HMGB1P42-201ENST00000532126 PARP2Q9UGN5 583 aa6.88□□□□□ -1.31
HMGB1P42-201ENST00000532126 SWAP70Q9UH65 585 aa6.88□□□□□ -1.31
HMGB1P42-201ENST00000532126 ZBTB21Q9ULJ3 1066 aa6.88□□□□□ -1.31
HMGB1P42-201ENST00000532126 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P42-201ENST00000532126 AFG3L2Q9Y4W6 797 aa6.88□□□□□ -1.31
HMGB1P42-201ENST00000532126 DNMT3AQ9Y6K1 912 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P42-201ENST00000532126 A0A0G2JLL6 359 aaPredicted RBP6.87□□□□□ -1.31
HMGB1P42-201ENST00000532126 GSG1L2A8MUP6 293 aa6.87□□□□□ -1.31
HMGB1P42-201ENST00000532126 GPR25O00155 361 aa6.87□□□□□ -1.31
HMGB1P42-201ENST00000532126 PDHXO00330 501 aa6.87□□□□□ -1.31
HMGB1P42-201ENST00000532126 GH2P01242 217 aa6.87□□□□□ -1.31
HMGB1P42-201ENST00000532126 SHMT1P34896 483 aa6.87□□□□□ -1.31
HMGB1P42-201ENST00000532126 JAG1P78504 1218 aa6.87□□□□□ -1.31
HMGB1P42-201ENST00000532126 GABPAQ06546 454 aa6.87□□□□□ -1.31
HMGB1P42-201ENST00000532126 PSMD2Q13200 908 aa6.87□□□□□ -1.31
HMGB1P42-201ENST00000532126 RAB3GAP1Q15042 981 aa6.87□□□□□ -1.31
HMGB1P42-201ENST00000532126 TAF1CQ15572 869 aaPredicted RBP6.87□□□□□ -1.31
HMGB1P42-201ENST00000532126 ECM1Q16610 540 aa6.87□□□□□ -1.31
HMGB1P42-201ENST00000532126 ABCB5Q2M3G0 1257 aa6.87□□□□□ -1.31
HMGB1P42-201ENST00000532126 MCMDC2Q4G0Z9 681 aa6.87□□□□□ -1.31
HMGB1P42-201ENST00000532126 C12orf60Q5U649 245 aa6.87□□□□□ -1.31
HMGB1P42-201ENST00000532126 ZNF746Q6NUN9 644 aaPredicted RBP6.87□□□□□ -1.31
HMGB1P42-201ENST00000532126 CTR9Q6PD62 1173 aa6.87□□□□□ -1.31
HMGB1P42-201ENST00000532126 GADL1Q6ZQY3 521 aa6.87□□□□□ -1.31
HMGB1P42-201ENST00000532126 CENPQQ7L2Z9 268 aaPredicted RBP6.87□□□□□ -1.31
HMGB1P42-201ENST00000532126 TMC7Q7Z402 723 aa6.87□□□□□ -1.31
HMGB1P42-201ENST00000532126 PRRT2Q7Z6L0 340 aaPredicted RBP6.87□□□□□ -1.31
HMGB1P42-201ENST00000532126 ANKRD23Q86SG2 305 aa6.87□□□□□ -1.31
HMGB1P42-201ENST00000532126 IFNL3Q8IZI9 196 aa6.87□□□□□ -1.31
HMGB1P42-201ENST00000532126 TNS4Q8IZW8 715 aa6.87□□□□□ -1.31
HMGB1P42-201ENST00000532126 ZNF296Q8WUU4 475 aaPredicted RBP6.87□□□□□ -1.31
HMGB1P42-201ENST00000532126 USB1Q9BQ65 265 aaKnown RBP6.87□□□□□ -1.31
HMGB1P42-201ENST00000532126 TMX1Q9H3N1 280 aa6.87□□□□□ -1.31
HMGB1P42-201ENST00000532126 R3HDMLQ9H3Y0 253 aa6.87□□□□□ -1.31
HMGB1P42-201ENST00000532126 ZFYVE28Q9HCC9 887 aa6.87□□□□□ -1.31
HMGB1P42-201ENST00000532126 ZCCHC17Q9NP64 241 aaKnown RBP6.87□□□□□ -1.31
HMGB1P42-201ENST00000532126 CABP5Q9NP86 173 aa6.87□□□□□ -1.31
HMGB1P42-201ENST00000532126 HELLSQ9NRZ9 838 aa6.87□□□□□ -1.31
HMGB1P42-201ENST00000532126 VPS9D1Q9Y2B5 631 aa6.87□□□□□ -1.31
HMGB1P42-201ENST00000532126 GPSM3Q9Y4H4 160 aa6.87□□□□□ -1.31
HMGB1P42-201ENST00000532126 OTOFQ9HC10 1997 aa6.87□□□□□ -1.31
HMGB1P42-201ENST00000532126 MYO5AQ9Y4I1 1855 aaKnown RBP6.86□□□□□ -1.31
HMGB1P42-201ENST00000532126 CYP2D7A0A087X1C5 515 aa6.86□□□□□ -1.31
HMGB1P42-201ENST00000532126 MINDY4BA8MYZ0 360 aa6.86□□□□□ -1.31
HMGB1P42-201ENST00000532126 HMGB1P1B2RPK0 211 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P42-201ENST00000532126 HIP1O00291 1037 aa6.86□□□□□ -1.31
HMGB1P42-201ENST00000532126 MPHOSPH10O00566 681 aaKnown RBP6.86□□□□□ -1.31
HMGB1P42-201ENST00000532126 TREHO43280 583 aa6.86□□□□□ -1.31
HMGB1P42-201ENST00000532126 FKTNO75072 461 aa6.86□□□□□ -1.31
HMGB1P42-201ENST00000532126 STK10O94804 968 aaKnown RBP6.86□□□□□ -1.31
HMGB1P42-201ENST00000532126 SDSP20132 328 aa6.86□□□□□ -1.31
HMGB1P42-201ENST00000532126 HMGCS2P54868 508 aa6.86□□□□□ -1.31
HMGB1P42-201ENST00000532126 KCNH2Q12809 1159 aa6.86□□□□□ -1.31
HMGB1P42-201ENST00000532126 NMIQ13287 307 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P42-201ENST00000532126 MOGSQ13724 837 aa6.86□□□□□ -1.31
HMGB1P42-201ENST00000532126 SHROOM1Q2M3G4 852 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P42-201ENST00000532126 SBK1Q52WX2 424 aa6.86□□□□□ -1.31
HMGB1P42-201ENST00000532126 TTC22Q5TAA0 569 aa6.86□□□□□ -1.31
HMGB1P42-201ENST00000532126 CCDC129Q6ZRS4 1044 aa6.86□□□□□ -1.31
HMGB1P42-201ENST00000532126 C16orf86Q6ZW13 317 aa6.86□□□□□ -1.31
HMGB1P42-201ENST00000532126 EXOC8Q8IYI6 725 aa6.86□□□□□ -1.31
HMGB1P42-201ENST00000532126 PHTF2Q8N3S3 785 aa6.86□□□□□ -1.31
HMGB1P42-201ENST00000532126 SLC44A5Q8NCS7 719 aa6.86□□□□□ -1.31
HMGB1P42-201ENST00000532126 MORC4Q8TE76 937 aa6.86□□□□□ -1.31
HMGB1P42-201ENST00000532126 DYNLL2Q96FJ2 89 aa6.86□□□□□ -1.31
HMGB1P42-201ENST00000532126 CCDC136Q96JN2 1154 aa6.86□□□□□ -1.31
HMGB1P42-201ENST00000532126 ZFRQ96KR1 1074 aaKnown RBP6.86□□□□□ -1.31
HMGB1P42-201ENST00000532126 FAM227BQ96M60 508 aa6.86□□□□□ -1.31
HMGB1P42-201ENST00000532126 PARK7Q99497 189 aaKnown RBP6.86□□□□□ -1.31
HMGB1P42-201ENST00000532126 FEZ1Q99689 392 aa6.86□□□□□ -1.31
HMGB1P42-201ENST00000532126 WDR18Q9BV38 432 aa6.86□□□□□ -1.31
HMGB1P42-201ENST00000532126 PRR14Q9BWN1 585 aa6.86□□□□□ -1.31
HMGB1P42-201ENST00000532126 NAPBQ9H115 298 aa6.86□□□□□ -1.31
HMGB1P42-201ENST00000532126 ACBD3Q9H3P7 528 aa6.86□□□□□ -1.31
HMGB1P42-201ENST00000532126 PIF1Q9H611 641 aa6.86□□□□□ -1.31
HMGB1P42-201ENST00000532126 DIAPH3Q9NSV4 1193 aa6.86□□□□□ -1.31
HMGB1P42-201ENST00000532126 TMOD4Q9NZQ9 345 aa6.86□□□□□ -1.31
HMGB1P42-201ENST00000532126 INPP5FQ9Y2H2 1132 aa6.86□□□□□ -1.31
HMGB1P42-201ENST00000532126 AK9Q5TCS8 1911 aa6.86□□□□□ -1.31
HMGB1P42-201ENST00000532126 A0A0D9SFI3 127 aa6.85□□□□□ -1.31
HMGB1P42-201ENST00000532126 C19orf81C9J6K1 198 aa6.85□□□□□ -1.31
HMGB1P42-201ENST00000532126 SMIM22K7EJ46 135 aa6.85□□□□□ -1.31
HMGB1P42-201ENST00000532126 TLR2O60603 784 aa6.85□□□□□ -1.31
HMGB1P42-201ENST00000532126 F12P00748 615 aaPredicted RBP6.85□□□□□ -1.31
HMGB1P42-201ENST00000532126 SLC3A2P08195 630 aaKnown RBP6.85□□□□□ -1.31
HMGB1P42-201ENST00000532126 CYP2C8P10632 490 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms