RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 VPS9D1Q9Y2B5 631 aa14.58□□□□□ -0.08
COPB1-208ENST00000532088 PALM3A6NDB9 673 aaPredicted RBP14.57□□□□□ -0.08
COPB1-208ENST00000532088 PFKFB2O60825 505 aa14.57□□□□□ -0.08
COPB1-208ENST00000532088 PARP1P09874 1014 aaKnown RBP14.57□□□□□ -0.08
COPB1-208ENST00000532088 VCAM1P19320 739 aa14.57□□□□□ -0.08
COPB1-208ENST00000532088 ZNF543Q08ER8 600 aa14.57□□□□□ -0.08
COPB1-208ENST00000532088 MOGSQ13724 837 aa14.57□□□□□ -0.08
COPB1-208ENST00000532088 BTNL9Q6UXG8 535 aa14.57□□□□□ -0.08
COPB1-208ENST00000532088 FANCBQ8NB91 859 aa14.57□□□□□ -0.08
COPB1-208ENST00000532088 LZTS2Q9BRK4 669 aa14.57□□□□□ -0.08
COPB1-208ENST00000532088 FEM1BQ9UK73 627 aa14.57□□□□□ -0.08
COPB1-208ENST00000532088 TPCN1Q9ULQ1 816 aa14.57□□□□□ -0.08
COPB1-208ENST00000532088 AGTPBP1Q9UPW5 1226 aa14.57□□□□□ -0.08
COPB1-208ENST00000532088 MYPNQ86TC9 1320 aa14.57□□□□□ -0.08
COPB1-208ENST00000532088 GOLGA8BA8MQT2 603 aa14.56□□□□□ -0.08
COPB1-208ENST00000532088 USP17L15C9J2P7 530 aa14.56□□□□□ -0.08
COPB1-208ENST00000532088 USP17L13C9JLJ4 530 aa14.56□□□□□ -0.08
COPB1-208ENST00000532088 USP17L11C9JVI0 530 aa14.56□□□□□ -0.08
COPB1-208ENST00000532088 USP17L18D6R9N7 530 aa14.56□□□□□ -0.08
COPB1-208ENST00000532088 USP17L22D6RA61 530 aa14.56□□□□□ -0.08
COPB1-208ENST00000532088 USP17L17D6RBQ6 530 aa14.56□□□□□ -0.08
COPB1-208ENST00000532088 USP17L19D6RCP7 530 aa14.56□□□□□ -0.08
COPB1-208ENST00000532088 USP17L20D6RJB6 530 aa14.56□□□□□ -0.08
COPB1-208ENST00000532088 DHX16O60231 1041 aaKnown RBP14.56□□□□□ -0.08
COPB1-208ENST00000532088 METAP2P50579 478 aaKnown RBP eCLIP14.56□□□□□ -0.08
COPB1-208ENST00000532088 USP17L24Q0WX57 530 aa14.56□□□□□ -0.08
COPB1-208ENST00000532088 SREBF2Q12772 1141 aa14.56□□□□□ -0.08
COPB1-208ENST00000532088 KIAA1755Q5JYT7 1200 aa14.56□□□□□ -0.08
COPB1-208ENST00000532088 ANKRD23Q86SG2 305 aa14.56□□□□□ -0.08
COPB1-208ENST00000532088 FAM160B2Q86V87 743 aa14.56□□□□□ -0.08
COPB1-208ENST00000532088 PACS2Q86VP3 889 aa14.56□□□□□ -0.08
COPB1-208ENST00000532088 MICU3Q86XE3 530 aa14.56□□□□□ -0.08
COPB1-208ENST00000532088 MAD2L2Q9UI95 211 aa14.56□□□□□ -0.08
COPB1-208ENST00000532088 HPS5Q9UPZ3 1129 aa14.56□□□□□ -0.08
COPB1-208ENST00000532088 ADGRG1Q9Y653 693 aa14.56□□□□□ -0.08
COPB1-208ENST00000532088 THSD7BQ9C0I4 1608 aa14.55□□□□□ -0.08
COPB1-208ENST00000532088 CCL15-CCL14A0A0B4J2E2 113 aa14.55□□□□□ -0.08
COPB1-208ENST00000532088 GOLGA8AA7E2F4 631 aa14.55□□□□□ -0.08
COPB1-208ENST00000532088 FDX1P10109 184 aa14.55□□□□□ -0.08
COPB1-208ENST00000532088 MAP2K2P36507 400 aa14.55□□□□□ -0.08
COPB1-208ENST00000532088 TM4SF4P48230 202 aa14.55□□□□□ -0.08
COPB1-208ENST00000532088 ZYXQ15942 572 aaKnown RBP14.55□□□□□ -0.08
COPB1-208ENST00000532088 CCL15Q16663 113 aa14.55□□□□□ -0.08
COPB1-208ENST00000532088 RTN1Q16799 776 aa14.55□□□□□ -0.08
COPB1-208ENST00000532088 CATSPERGQ6ZRH7 1159 aa14.55□□□□□ -0.08
COPB1-208ENST00000532088 GTF3C2Q8WUA4 911 aaPredicted RBP14.55□□□□□ -0.08
COPB1-208ENST00000532088 CHURC1Q8WUH1 139 aa14.55□□□□□ -0.08
COPB1-208ENST00000532088 NUP133Q8WUM0 1156 aa14.55□□□□□ -0.08
COPB1-208ENST00000532088 BRI3BPQ8WY22 251 aa14.55□□□□□ -0.08
COPB1-208ENST00000532088 CAPNS2Q96L46 248 aa14.55□□□□□ -0.08
COPB1-208ENST00000532088 SLKQ9H2G2 1235 aaPredicted RBP14.55□□□□□ -0.08
COPB1-208ENST00000532088 RABGEF1Q9UJ41 708 aa14.55□□□□□ -0.08
COPB1-208ENST00000532088 PNMA3Q9UL41 463 aa14.55□□□□□ -0.08
COPB1-208ENST00000532088 STAT2P52630 851 aa14.54□□□□□ -0.08
COPB1-208ENST00000532088 ME3Q16798 604 aa14.54□□□□□ -0.08
COPB1-208ENST00000532088 CCDC96Q2M329 555 aa14.54□□□□□ -0.08
COPB1-208ENST00000532088 FAM83BQ5T0W9 1011 aa14.54□□□□□ -0.08
COPB1-208ENST00000532088 OTUD7BQ6GQQ9 843 aa14.54□□□□□ -0.08
COPB1-208ENST00000532088 CYP4F22Q6NT55 531 aa14.54□□□□□ -0.08
COPB1-208ENST00000532088 GPAT2Q6NUI2 795 aa14.54□□□□□ -0.08
COPB1-208ENST00000532088 CPLX2Q6PUV4 134 aaKnown RBP14.54□□□□□ -0.08
COPB1-208ENST00000532088 GADL1Q6ZQY3 521 aa14.54□□□□□ -0.08
COPB1-208ENST00000532088 SPICE1Q8N0Z3 855 aa14.54□□□□□ -0.08
COPB1-208ENST00000532088 GTF3C6Q969F1 213 aa14.54□□□□□ -0.08
COPB1-208ENST00000532088 MYL10Q9BUA6 226 aa14.54□□□□□ -0.08
COPB1-208ENST00000532088 SPZ1Q9BXG8 430 aa14.54□□□□□ -0.08
COPB1-208ENST00000532088 RPAP3Q9H6T3 665 aaPredicted RBP14.54□□□□□ -0.08
COPB1-208ENST00000532088 FAM217BQ9NTX9 383 aaPredicted RBP14.54□□□□□ -0.08
COPB1-208ENST00000532088 KIAA1468Q9P260 1216 aa14.54□□□□□ -0.08
COPB1-208ENST00000532088 WDR33Q9C0J8 1336 aaKnown RBP14.53□□□□□ -0.08
COPB1-208ENST00000532088 BTBD19C9JJ37 291 aa14.53□□□□□ -0.08
COPB1-208ENST00000532088 KLRF2D3W0D1 207 aa14.53□□□□□ -0.08
COPB1-208ENST00000532088 K7ELQ4 463 aaPredicted RBP14.53□□□□□ -0.08
COPB1-208ENST00000532088 CD2BP2O95400 341 aaKnown RBP14.53□□□□□ -0.08
COPB1-208ENST00000532088 SCRN1Q12765 414 aa14.53□□□□□ -0.08
COPB1-208ENST00000532088 COG2Q14746 738 aa14.53□□□□□ -0.08
COPB1-208ENST00000532088 LBX2Q6XYB7 198 aa14.53□□□□□ -0.08
COPB1-208ENST00000532088 TMTC3Q6ZXV5 915 aa14.53□□□□□ -0.08
COPB1-208ENST00000532088 HSCBQ8IWL3 235 aa14.53□□□□□ -0.08
COPB1-208ENST00000532088 PRPF38AQ8NAV1 312 aaKnown RBP14.53□□□□□ -0.08
COPB1-208ENST00000532088 TMX3Q96JJ7 454 aa14.53□□□□□ -0.08
COPB1-208ENST00000532088 HOXC10Q9NYD6 342 aa14.53□□□□□ -0.08
COPB1-208ENST00000532088 TMEM232C9JQI7 657 aa14.52□□□□□ -0.09
COPB1-208ENST00000532088 RAD21O60216 631 aa14.52□□□□□ -0.09
COPB1-208ENST00000532088 CDKL5O76039 1030 aa14.52□□□□□ -0.09
COPB1-208ENST00000532088 ALDH1A1P00352 501 aa14.52□□□□□ -0.09
COPB1-208ENST00000532088 OATP04181 439 aa14.52□□□□□ -0.09
COPB1-208ENST00000532088 IFNAR1P17181 557 aa14.52□□□□□ -0.09
COPB1-208ENST00000532088 KIF23Q02241 960 aaPredicted RBP14.52□□□□□ -0.09
COPB1-208ENST00000532088 DGKZQ13574 1117 aa14.52□□□□□ -0.09
COPB1-208ENST00000532088 TREML2Q5T2D2 321 aa14.52□□□□□ -0.09
COPB1-208ENST00000532088 ADGRD1Q6QNK2 874 aa14.52□□□□□ -0.09
COPB1-208ENST00000532088 KCTD1Q719H9 257 aa14.52□□□□□ -0.09
COPB1-208ENST00000532088 STAG2Q8N3U4 1231 aa14.52□□□□□ -0.09
COPB1-208ENST00000532088 SLF1Q9BQI6 1058 aa14.52□□□□□ -0.09
COPB1-208ENST00000532088 LLPHQ9BRT6 129 aaKnown RBP14.52□□□□□ -0.09
COPB1-208ENST00000532088 TANGO6Q9C0B7 1094 aa14.52□□□□□ -0.09
COPB1-208ENST00000532088 RIOX1Q9H6W3 641 aa14.52□□□□□ -0.09
COPB1-208ENST00000532088 PNMA2Q9UL42 364 aa14.52□□□□□ -0.09
COPB1-208ENST00000532088 PPP1R9AQ9ULJ8 1098 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms