RNA–Protein interactions for RNA: ENST00000532014.1

TRIM53AP-201, Transcript of tripartite motif containing 53A, pseudogene, humanhuman

BASIC

Gene TRIM53AP, Length 1,544 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53AP-201ENST00000532014 CCDC82Q8N4S0 544 aa10.8□□□□□ -0.68
TRIM53AP-201ENST00000532014 GTF3C6Q969F1 213 aa10.8□□□□□ -0.68
TRIM53AP-201ENST00000532014 PARK7Q99497 189 aaKnown RBP10.8□□□□□ -0.68
TRIM53AP-201ENST00000532014 RANBP17Q9H2T7 1088 aaKnown RBP10.8□□□□□ -0.68
TRIM53AP-201ENST00000532014 PNMA3Q9UL41 463 aa10.8□□□□□ -0.68
TRIM53AP-201ENST00000532014 LIMCH1Q9UPQ0 1083 aa10.8□□□□□ -0.68
TRIM53AP-201ENST00000532014 hCG_1642624A0A1W2PR95 340 aa10.79□□□□□ -0.68
TRIM53AP-201ENST00000532014 OSBPP22059 807 aa10.79□□□□□ -0.68
TRIM53AP-201ENST00000532014 CTGFP29279 349 aa10.79□□□□□ -0.68
TRIM53AP-201ENST00000532014 FAM160B2Q86V87 743 aa10.79□□□□□ -0.68
TRIM53AP-201ENST00000532014 ANKRD13CQ8N6S4 541 aa10.79□□□□□ -0.68
TRIM53AP-201ENST00000532014 CTCFLQ8NI51 663 aaPredicted RBP10.79□□□□□ -0.68
TRIM53AP-201ENST00000532014 PHKBQ93100 1093 aa10.79□□□□□ -0.68
TRIM53AP-201ENST00000532014 SHISA4Q96DD7 197 aa10.79□□□□□ -0.68
TRIM53AP-201ENST00000532014 SPZ1Q9BXG8 430 aa10.79□□□□□ -0.68
TRIM53AP-201ENST00000532014 HOXC10Q9NYD6 342 aa10.79□□□□□ -0.68
TRIM53AP-201ENST00000532014 CPA4Q9UI42 421 aa10.79□□□□□ -0.68
TRIM53AP-201ENST00000532014 TSKSQ9UJT2 592 aa10.79□□□□□ -0.68
TRIM53AP-201ENST00000532014 ISY1Q9ULR0 285 aaKnown RBP10.79□□□□□ -0.68
TRIM53AP-201ENST00000532014 NAP1L2Q9ULW6 460 aaPredicted RBP10.79□□□□□ -0.68
TRIM53AP-201ENST00000532014 RIPK3Q9Y572 518 aa10.79□□□□□ -0.68
TRIM53AP-201ENST00000532014 ZNFX1Q9P2E3 1918 aaKnown RBP10.79□□□□□ -0.68
TRIM53AP-201ENST00000532014 ST18O60284 1047 aa10.79□□□□□ -0.68
TRIM53AP-201ENST00000532014 ALDH1A1P00352 501 aa10.79□□□□□ -0.68
TRIM53AP-201ENST00000532014 KIF5BP33176 963 aa10.79□□□□□ -0.68
TRIM53AP-201ENST00000532014 ERVK-9P63128 1117 aa10.79□□□□□ -0.68
TRIM53AP-201ENST00000532014 ERVK-24P63145 666 aa10.79□□□□□ -0.68
TRIM53AP-201ENST00000532014 MAP2K1Q02750 393 aaPredicted RBP10.79□□□□□ -0.68
TRIM53AP-201ENST00000532014 OTUD7BQ6GQQ9 843 aa10.79□□□□□ -0.68
TRIM53AP-201ENST00000532014 SMCR8Q8TEV9 937 aaPredicted RBP10.79□□□□□ -0.68
TRIM53AP-201ENST00000532014 CHURC1Q8WUH1 139 aa10.79□□□□□ -0.68
TRIM53AP-201ENST00000532014 TMX3Q96JJ7 454 aa10.79□□□□□ -0.68
TRIM53AP-201ENST00000532014 AGBL1Q96MI9 1066 aa10.79□□□□□ -0.68
TRIM53AP-201ENST00000532014 PIGSQ96S52 555 aa10.79□□□□□ -0.68
TRIM53AP-201ENST00000532014 RBM28Q9NW13 759 aaKnown RBP10.79□□□□□ -0.68
TRIM53AP-201ENST00000532014 SAGE1Q9NXZ1 904 aa10.79□□□□□ -0.68
TRIM53AP-201ENST00000532014 MORF4L1Q9UBU8 362 aa10.79□□□□□ -0.68
TRIM53AP-201ENST00000532014 CASP8AP2Q9UKL3 1982 aa10.78□□□□□ -0.68
TRIM53AP-201ENST00000532014 ATP2A1O14983 1001 aa10.78□□□□□ -0.68
TRIM53AP-201ENST00000532014 IFNAR1P17181 557 aa10.78□□□□□ -0.68
TRIM53AP-201ENST00000532014 SMARCA1P28370 1054 aa10.78□□□□□ -0.68
TRIM53AP-201ENST00000532014 IKQ13123 557 aaPredicted RBP10.78□□□□□ -0.68
TRIM53AP-201ENST00000532014 PKN1Q16512 942 aa10.78□□□□□ -0.68
TRIM53AP-201ENST00000532014 CDC37Q16543 378 aaPredicted RBP10.78□□□□□ -0.68
TRIM53AP-201ENST00000532014 FAM110CQ1W6H9 321 aa10.78□□□□□ -0.68
TRIM53AP-201ENST00000532014 QRICH1Q2TAL8 776 aa10.78□□□□□ -0.68
TRIM53AP-201ENST00000532014 SYNE3Q6ZMZ3 975 aa10.78□□□□□ -0.68
TRIM53AP-201ENST00000532014 SNX21Q969T3 373 aa10.78□□□□□ -0.68
TRIM53AP-201ENST00000532014 PAGR1Q9BTK6 254 aa10.78□□□□□ -0.68
TRIM53AP-201ENST00000532014 PORCNQ9H237 461 aa10.78□□□□□ -0.68
TRIM53AP-201ENST00000532014 SLKQ9H2G2 1235 aaPredicted RBP10.78□□□□□ -0.68
TRIM53AP-201ENST00000532014 ZFYVE28Q9HCC9 887 aa10.78□□□□□ -0.68
TRIM53AP-201ENST00000532014 VAT1LQ9HCJ6 419 aa10.78□□□□□ -0.68
TRIM53AP-201ENST00000532014 RABGAP1Q9Y3P9 1069 aa10.78□□□□□ -0.68
TRIM53AP-201ENST00000532014 OPLAHO14841 1288 aa10.77□□□□□ -0.69
TRIM53AP-201ENST00000532014 ZBTB5O15062 677 aa10.77□□□□□ -0.69
TRIM53AP-201ENST00000532014 JAK2O60674 1132 aa10.77□□□□□ -0.69
TRIM53AP-201ENST00000532014 FDPSP14324 419 aaKnown RBP10.77□□□□□ -0.69
TRIM53AP-201ENST00000532014 GCLCP48506 637 aaPredicted RBP10.77□□□□□ -0.69
TRIM53AP-201ENST00000532014 PPP2R5BQ15173 497 aa10.77□□□□□ -0.69
TRIM53AP-201ENST00000532014 TYW1BQ6NUM6 668 aa10.77□□□□□ -0.69
TRIM53AP-201ENST00000532014 CCDC174Q6PII3 467 aa10.77□□□□□ -0.69
TRIM53AP-201ENST00000532014 HOMER1Q86YM7 354 aa10.77□□□□□ -0.69
TRIM53AP-201ENST00000532014 CCDC83Q8IWF9 413 aa10.77□□□□□ -0.69
TRIM53AP-201ENST00000532014 NSUN7Q8NE18 718 aaKnown RBP10.77□□□□□ -0.69
TRIM53AP-201ENST00000532014 IL27Q8NEV9 243 aa10.77□□□□□ -0.69
TRIM53AP-201ENST00000532014 PIBF1Q8WXW3 757 aa10.77□□□□□ -0.69
TRIM53AP-201ENST00000532014 MOV10L1Q9BXT6 1211 aaKnown RBP10.77□□□□□ -0.69
TRIM53AP-201ENST00000532014 ARHGAP39Q9C0H5 1083 aa10.77□□□□□ -0.69
TRIM53AP-201ENST00000532014 SPATC1LQ9H0A9 340 aa10.77□□□□□ -0.69
TRIM53AP-201ENST00000532014 RAVER2Q9HCJ3 691 aaKnown RBP10.77□□□□□ -0.69
TRIM53AP-201ENST00000532014 PLXNA1Q9UIW2 1896 aa10.77□□□□□ -0.69
TRIM53AP-201ENST00000532014 ZNF236Q9UL36 1845 aa10.77□□□□□ -0.69
TRIM53AP-201ENST00000532014 ICAM1P05362 532 aa10.76□□□□□ -0.69
TRIM53AP-201ENST00000532014 GNAQP50148 359 aa10.76□□□□□ -0.69
TRIM53AP-201ENST00000532014 OAZ1P54368 228 aa10.76□□□□□ -0.69
TRIM53AP-201ENST00000532014 CPXCR1Q8N123 301 aa10.76□□□□□ -0.69
TRIM53AP-201ENST00000532014 MB21D1Q8N884 522 aa10.76□□□□□ -0.69
TRIM53AP-201ENST00000532014 AIFM3Q96NN9 605 aa10.76□□□□□ -0.69
TRIM53AP-201ENST00000532014 LZTS2Q9BRK4 669 aa10.76□□□□□ -0.69
TRIM53AP-201ENST00000532014 SH2B1Q9NRF2 756 aaPredicted RBP10.76□□□□□ -0.69
TRIM53AP-201ENST00000532014 CCDC196A0A1B0GTZ2 297 aa10.75□□□□□ -0.69
TRIM53AP-201ENST00000532014 GPR25O00155 361 aa10.75□□□□□ -0.69
TRIM53AP-201ENST00000532014 ADAMTS3O15072 1205 aa10.75□□□□□ -0.69
TRIM53AP-201ENST00000532014 FOXN1O15353 648 aa10.75□□□□□ -0.69
TRIM53AP-201ENST00000532014 PRPF3O43395 683 aaKnown RBP10.75□□□□□ -0.69
TRIM53AP-201ENST00000532014 FDX1P10109 184 aa10.75□□□□□ -0.69
TRIM53AP-201ENST00000532014 STAT3P40763 770 aa10.75□□□□□ -0.69
TRIM53AP-201ENST00000532014 MCM2P49736 904 aa10.75□□□□□ -0.69
TRIM53AP-201ENST00000532014 CUL4AQ13619 759 aa10.75□□□□□ -0.69
TRIM53AP-201ENST00000532014 USH1GQ495M9 461 aa10.75□□□□□ -0.69
TRIM53AP-201ENST00000532014 MUM1L1Q5H9M0 696 aa10.75□□□□□ -0.69
TRIM53AP-201ENST00000532014 SNRNP48Q6IEG0 339 aaKnown RBP10.75□□□□□ -0.69
TRIM53AP-201ENST00000532014 RIOX2Q8IUF8 465 aa10.75□□□□□ -0.69
TRIM53AP-201ENST00000532014 GPRC5AQ8NFJ5 357 aa10.75□□□□□ -0.69
TRIM53AP-201ENST00000532014 SMARCC2Q8TAQ2 1214 aa10.75□□□□□ -0.69
TRIM53AP-201ENST00000532014 GTF3C2Q8WUA4 911 aaPredicted RBP10.75□□□□□ -0.69
TRIM53AP-201ENST00000532014 CLEC4DQ8WXI8 215 aa10.75□□□□□ -0.69
TRIM53AP-201ENST00000532014 GPKOWQ92917 476 aaPredicted RBP eCLIP10.75□□□□□ -0.69
TRIM53AP-201ENST00000532014 ZSCAN31Q96LW9 406 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms