RNA–Protein interactions for RNA: ENST00000531920.6

MED17-208, Transcript of mediator complex subunit 17, human

TSL 3

Gene MED17, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MED17-208	ENST00000531920	SMG8	Q8ND04	991 aa	Known RBP	6.08	□□□□□ -1.44
MED17-208	ENST00000531920	SLC52A2	Q9HAB3	445 aa		6.08	□□□□□ -1.44
MED17-208	ENST00000531920	TRIM39	Q9HCM9	518 aa		6.08	□□□□□ -1.44
MED17-208	ENST00000531920	GP6	Q9HCN6	339 aa		6.08	□□□□□ -1.44
MED17-208	ENST00000531920	FAM105A	Q9NUU6	356 aa		6.08	□□□□□ -1.44
MED17-208	ENST00000531920	INTS7	Q9NVH2	962 aa	Known RBP	6.08	□□□□□ -1.44
MED17-208	ENST00000531920	GABBR1	Q9UBS5	961 aa		6.08	□□□□□ -1.44
MED17-208	ENST00000531920	FBXL21	Q9UKT6	434 aa		6.08	□□□□□ -1.44
MED17-208	ENST00000531920	CEP131	Q9UPN4	1083 aa		6.08	□□□□□ -1.44
MED17-208	ENST00000531920	ACTL7B	Q9Y614	415 aa		6.08	□□□□□ -1.44
MED17-208	ENST00000531920	FAM83G	A6ND36	823 aa		6.07	□□□□□ -1.44
MED17-208	ENST00000531920	RBAK-RBAKDN	I3L0D1	243 aa		6.07	□□□□□ -1.44
MED17-208	ENST00000531920	OPA1	O60313	960 aa		6.07	□□□□□ -1.44
MED17-208	ENST00000531920	DLX3	O60479	287 aa		6.07	□□□□□ -1.44
MED17-208	ENST00000531920	KATNA1	O75449	491 aa		6.07	□□□□□ -1.44
MED17-208	ENST00000531920	ALDH1L1	O75891	902 aa		6.07	□□□□□ -1.44
MED17-208	ENST00000531920	C6orf222	P0C671	652 aa	Predicted RBP	6.07	□□□□□ -1.44
MED17-208	ENST00000531920	PML	P29590	882 aa		6.07	□□□□□ -1.44
MED17-208	ENST00000531920	NEK4	P51957	841 aa		6.07	□□□□□ -1.44
MED17-208	ENST00000531920	MAP7	Q14244	749 aa		6.07	□□□□□ -1.44
MED17-208	ENST00000531920	ZNF460	Q14592	562 aa		6.07	□□□□□ -1.44
MED17-208	ENST00000531920	PPP2R5D	Q14738	602 aa		6.07	□□□□□ -1.44
MED17-208	ENST00000531920	NOL9	Q5SY16	702 aa	Known RBP	6.07	□□□□□ -1.44
MED17-208	ENST00000531920	KRTAP5-3	Q6L8H2	238 aa		6.07	□□□□□ -1.44
MED17-208	ENST00000531920	TRIM59	Q8IWR1	403 aa		6.07	□□□□□ -1.44
MED17-208	ENST00000531920	ABI1	Q8IZP0	508 aa		6.07	□□□□□ -1.44
MED17-208	ENST00000531920	MFSD2A	Q8NA29	543 aa		6.07	□□□□□ -1.44
MED17-208	ENST00000531920	RIN3	Q8TB24	985 aa		6.07	□□□□□ -1.44
MED17-208	ENST00000531920	TSR2	Q969E8	191 aa	Known RBP	6.07	□□□□□ -1.44
MED17-208	ENST00000531920	UTP4	Q969X6	686 aa	Known RBP	6.07	□□□□□ -1.44
MED17-208	ENST00000531920	KREMEN1	Q96MU8	473 aa		6.07	□□□□□ -1.44
MED17-208	ENST00000531920	MIPEP	Q99797	713 aa		6.07	□□□□□ -1.44
MED17-208	ENST00000531920	SUGCT	Q9HAC7	445 aa		6.07	□□□□□ -1.44
MED17-208	ENST00000531920	LGR6	Q9HBX8	967 aa		6.07	□□□□□ -1.44
MED17-208	ENST00000531920	EMC9	Q9Y3B6	208 aa		6.07	□□□□□ -1.44
MED17-208	ENST00000531920	TNPO3	Q9Y5L0	923 aa	Known RBP	6.07	□□□□□ -1.44
MED17-208	ENST00000531920	DHX15	O43143	795 aa	Known RBP	6.06	□□□□□ -1.44
MED17-208	ENST00000531920	GAS2	O43903	313 aa	Known RBP	6.06	□□□□□ -1.44
MED17-208	ENST00000531920	LRIG2	O94898	1065 aa		6.06	□□□□□ -1.44
MED17-208	ENST00000531920	KCNJ6	P48051	423 aa		6.06	□□□□□ -1.44
MED17-208	ENST00000531920	ZNF445	P59923	1031 aa		6.06	□□□□□ -1.44
MED17-208	ENST00000531920	TRIM61	Q5EBN2	209 aa		6.06	□□□□□ -1.44
MED17-208	ENST00000531920	PKN3	Q6P5Z2	889 aa		6.06	□□□□□ -1.44
MED17-208	ENST00000531920	POMZP3	Q6PJE2	187 aa		6.06	□□□□□ -1.44
MED17-208	ENST00000531920	SPOCD1	Q6ZMY3	1216 aa		6.06	□□□□□ -1.44
MED17-208	ENST00000531920	LHFPL2	Q6ZUX7	228 aa		6.06	□□□□□ -1.44
MED17-208	ENST00000531920	WDR75	Q8IWA0	830 aa	Known RBP	6.06	□□□□□ -1.44
MED17-208	ENST00000531920	AHI1	Q8N157	1196 aa		6.06	□□□□□ -1.44
MED17-208	ENST00000531920	PPM1K	Q8N3J5	372 aa		6.06	□□□□□ -1.44
MED17-208	ENST00000531920	ARHGEF39	Q8N4T4	335 aa		6.06	□□□□□ -1.44
MED17-208	ENST00000531920	C2CD4A	Q8NCU7	369 aa	Predicted RBP	6.06	□□□□□ -1.44
MED17-208	ENST00000531920	DNAJB8	Q8NHS0	232 aa		6.06	□□□□□ -1.44
MED17-208	ENST00000531920	VWCE	Q96DN2	955 aa		6.06	□□□□□ -1.44
MED17-208	ENST00000531920	RCC1L	Q96I51	464 aa	Known RBP	6.06	□□□□□ -1.44
MED17-208	ENST00000531920	GSX1	Q9H4S2	264 aa	Predicted RBP	6.06	□□□□□ -1.44
MED17-208	ENST00000531920	NOL6	Q9H6R4	1146 aa	Known RBP	6.06	□□□□□ -1.44
MED17-208	ENST00000531920	CGGBP1	Q9UFW8	167 aa	Predicted RBP	6.06	□□□□□ -1.44
MED17-208	ENST00000531920	PCOLCE2	Q9UKZ9	415 aa		6.06	□□□□□ -1.44
MED17-208	ENST00000531920	KPNA6	O60684	536 aa		6.05	□□□□□ -1.44
MED17-208	ENST00000531920	TIAF1	O95411	115 aa		6.05	□□□□□ -1.44
MED17-208	ENST00000531920	EYA4	O95677	639 aa		6.05	□□□□□ -1.44
MED17-208	ENST00000531920	SNRPB2	P08579	225 aa	Known RBP	6.05	□□□□□ -1.44
MED17-208	ENST00000531920	CPE	P16870	476 aa		6.05	□□□□□ -1.44
MED17-208	ENST00000531920	RAB6A	P20340	208 aa		6.05	□□□□□ -1.44
MED17-208	ENST00000531920	RNF4	P78317	190 aa		6.05	□□□□□ -1.44
MED17-208	ENST00000531920	GABRE	P78334	506 aa		6.05	□□□□□ -1.44
MED17-208	ENST00000531920	TTF1	Q15361	905 aa	Predicted RBP	6.05	□□□□□ -1.44
MED17-208	ENST00000531920	RNF43	Q68DV7	783 aa		6.05	□□□□□ -1.44
MED17-208	ENST00000531920	ANKRD34A	Q69YU3	496 aa		6.05	□□□□□ -1.44
MED17-208	ENST00000531920	GTF2IRD2B	Q6EKJ0	949 aa		6.05	□□□□□ -1.44
MED17-208	ENST00000531920	LETMD1	Q6P1Q0	360 aa		6.05	□□□□□ -1.44
MED17-208	ENST00000531920	GTF2IRD2	Q86UP8	949 aa		6.05	□□□□□ -1.44
MED17-208	ENST00000531920	SCLY	Q96I15	445 aa		6.05	□□□□□ -1.44
MED17-208	ENST00000531920	KCNF1	Q9H3M0	494 aa		6.05	□□□□□ -1.44
MED17-208	ENST00000531920	PCDHB12	Q9Y5F1	795 aa		6.05	□□□□□ -1.44
MED17-208	ENST00000531920	CCDC194	A0A1B0GVG4	234 aa		6.04	□□□□□ -1.44
MED17-208	ENST00000531920	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	6.04	□□□□□ -1.44
MED17-208	ENST00000531920	EFCAB14	O75071	495 aa		6.04	□□□□□ -1.44
MED17-208	ENST00000531920	VAMP4	O75379	141 aa		6.04	□□□□□ -1.44
MED17-208	ENST00000531920	JMJD7	P0C870	316 aa		6.04	□□□□□ -1.44
MED17-208	ENST00000531920	ECI1	P42126	302 aa		6.04	□□□□□ -1.44
MED17-208	ENST00000531920	SNW1	Q13573	536 aa	Known RBP	6.04	□□□□□ -1.44
MED17-208	ENST00000531920	SEPT7	Q16181	437 aa	Known RBP	6.04	□□□□□ -1.44
MED17-208	ENST00000531920	NTRK3	Q16288	839 aa		6.04	□□□□□ -1.44
MED17-208	ENST00000531920	PRSS53	Q2L4Q9	553 aa		6.04	□□□□□ -1.44
MED17-208	ENST00000531920	UVSSA	Q2YD98	709 aa		6.04	□□□□□ -1.44
MED17-208	ENST00000531920	CERS3	Q8IU89	383 aa		6.04	□□□□□ -1.44
MED17-208	ENST00000531920	CCDC146	Q8IYE0	955 aa		6.04	□□□□□ -1.44
MED17-208	ENST00000531920	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	6.04	□□□□□ -1.44
MED17-208	ENST00000531920	GSTCD	Q8NEC7	633 aa		6.04	□□□□□ -1.44
MED17-208	ENST00000531920	WDR66	Q8TBY9	1149 aa		6.04	□□□□□ -1.44
MED17-208	ENST00000531920	KCTD13	Q8WZ19	329 aa		6.04	□□□□□ -1.44
MED17-208	ENST00000531920	CCDC136	Q96JN2	1154 aa		6.04	□□□□□ -1.44
MED17-208	ENST00000531920	SMAD5	Q99717	465 aa	Known RBP	6.04	□□□□□ -1.44
MED17-208	ENST00000531920	DBNDD2	Q9BQY9	259 aa		6.04	□□□□□ -1.44
MED17-208	ENST00000531920	MTFR1L	Q9H019	292 aa		6.04	□□□□□ -1.44
MED17-208	ENST00000531920	DAGLA	Q9Y4D2	1042 aa		6.04	□□□□□ -1.44
MED17-208	ENST00000531920	TRAF6	Q9Y4K3	522 aa		6.04	□□□□□ -1.44
MED17-208	ENST00000531920	LRRN2	O75325	713 aa		6.03	□□□□□ -1.44
MED17-208	ENST00000531920	PEX14	O75381	377 aa		6.03	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms