RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 MFSD5Q6N075 450 aa20.67■□□□□ 0.9
PKP3-208ENST00000531857 ARMCX2Q7L311 632 aa20.67■□□□□ 0.9
PKP3-208ENST00000531857 LRRC47Q8N1G4 583 aaKnown RBP20.67■□□□□ 0.9
PKP3-208ENST00000531857 UPF3AQ9H1J1 476 aaKnown RBP20.67■□□□□ 0.9
PKP3-208ENST00000531857 ABHD16BQ9H3Z7 469 aa20.67■□□□□ 0.9
PKP3-208ENST00000531857 MTMR4Q9NYA4 1195 aa20.67■□□□□ 0.9
PKP3-208ENST00000531857 FEM1BQ9UK73 627 aa20.67■□□□□ 0.9
PKP3-208ENST00000531857 CTDP1Q9Y5B0 961 aaPredicted RBP20.67■□□□□ 0.9
PKP3-208ENST00000531857 CTAGE5O15320 804 aa20.66■□□□□ 0.9
PKP3-208ENST00000531857 TDO2P48775 406 aa20.66■□□□□ 0.9
PKP3-208ENST00000531857 GJA9P57773 515 aa20.66■□□□□ 0.9
PKP3-208ENST00000531857 GNASQ5JWF2 1037 aa20.66■□□□□ 0.9
PKP3-208ENST00000531857 CCDC144CPQ8IYA2 1237 aa20.66■□□□□ 0.9
PKP3-208ENST00000531857 ZNF444Q8N0Y2 327 aaPredicted RBP20.66■□□□□ 0.9
PKP3-208ENST00000531857 PCSK9Q8NBP7 692 aaKnown RBP20.66■□□□□ 0.9
PKP3-208ENST00000531857 VTI1AQ96AJ9 217 aa20.66■□□□□ 0.9
PKP3-208ENST00000531857 KATNBL1Q9H079 304 aa20.66■□□□□ 0.9
PKP3-208ENST00000531857 ZNF576Q9H609 170 aa20.66■□□□□ 0.9
PKP3-208ENST00000531857 HOMER2Q9NSB8 354 aa20.66■□□□□ 0.9
PKP3-208ENST00000531857 MROH7Q68CQ1 1323 aa20.66■□□□□ 0.9
PKP3-208ENST00000531857 LCTP09848 1927 aa20.66■□□□□ 0.9
PKP3-208ENST00000531857 GRXCR1A8MXD5 290 aa20.65■□□□□ 0.9
PKP3-208ENST00000531857 APPP05067 770 aa20.65■□□□□ 0.9
PKP3-208ENST00000531857 CSF2RAP15509 400 aa20.65■□□□□ 0.9
PKP3-208ENST00000531857 PBX2P40425 430 aa20.65■□□□□ 0.9
PKP3-208ENST00000531857 CNTN2Q02246 1040 aa20.65■□□□□ 0.9
PKP3-208ENST00000531857 TMEM240Q5SV17 173 aa20.65■□□□□ 0.9
PKP3-208ENST00000531857 FAM126BQ8IXS8 530 aa20.65■□□□□ 0.9
PKP3-208ENST00000531857 GMCL1P1Q8NEA9 526 aa20.65■□□□□ 0.9
PKP3-208ENST00000531857 CHST13Q8NET6 341 aa20.65■□□□□ 0.9
PKP3-208ENST00000531857 TIFAQ96CG3 184 aa20.65■□□□□ 0.9
PKP3-208ENST00000531857 FBXO40Q9UH90 709 aa20.65■□□□□ 0.9
PKP3-208ENST00000531857 ARVCFO00192 962 aa20.64■□□□□ 0.89
PKP3-208ENST00000531857 TTLL1O95922 423 aa20.64■□□□□ 0.89
PKP3-208ENST00000531857 NEFLP07196 543 aa20.64■□□□□ 0.89
PKP3-208ENST00000531857 ACRP10323 421 aa20.64■□□□□ 0.89
PKP3-208ENST00000531857 OAZ1P54368 228 aa20.64■□□□□ 0.89
PKP3-208ENST00000531857 BEX3Q00994 111 aa20.64■□□□□ 0.89
PKP3-208ENST00000531857 PPIGQ13427 754 aaKnown RBP eCLIP20.64■□□□□ 0.89
PKP3-208ENST00000531857 SLFN13Q68D06 897 aa20.64■□□□□ 0.89
PKP3-208ENST00000531857 CHMP4CQ96CF2 233 aa20.64■□□□□ 0.89
PKP3-208ENST00000531857 PPP1R12CQ9BZL4 782 aa20.64■□□□□ 0.89
PKP3-208ENST00000531857 SPC25Q9HBM1 224 aa20.64■□□□□ 0.89
PKP3-208ENST00000531857 RCAN3Q9UKA8 241 aa20.64■□□□□ 0.89
PKP3-208ENST00000531857 CHD9Q3L8U1 2897 aa20.64■□□□□ 0.89
PKP3-208ENST00000531857 ASTN1O14525 1302 aa20.63■□□□□ 0.89
PKP3-208ENST00000531857 A0A0U1RQG5 324 aaPredicted RBP20.63■□□□□ 0.89
PKP3-208ENST00000531857 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.63■□□□□ 0.89
PKP3-208ENST00000531857 PATL2C9JE40 543 aaKnown RBP20.63■□□□□ 0.89
PKP3-208ENST00000531857 BMP3P12645 472 aa20.63■□□□□ 0.89
PKP3-208ENST00000531857 GNAT2P19087 354 aa20.63■□□□□ 0.89
PKP3-208ENST00000531857 RASIP1Q5U651 963 aa20.63■□□□□ 0.89
PKP3-208ENST00000531857 IFNL3Q8IZI9 196 aa20.63■□□□□ 0.89
PKP3-208ENST00000531857 FAM133AQ8N9E0 248 aa20.63■□□□□ 0.89
PKP3-208ENST00000531857 PBX4Q9BYU1 374 aa20.63■□□□□ 0.89
PKP3-208ENST00000531857 SYNPO2Q9UMS6 1093 aa20.63■□□□□ 0.89
PKP3-208ENST00000531857 TTC28Q96AY4 2481 aa20.63■□□□□ 0.89
PKP3-208ENST00000531857 PLIN4Q96Q06 1357 aa20.62■□□□□ 0.89
PKP3-208ENST00000531857 TMEM232C9JQI7 657 aa20.62■□□□□ 0.89
PKP3-208ENST00000531857 ZFYP08048 801 aaPredicted RBP20.62■□□□□ 0.89
PKP3-208ENST00000531857 PTGS1P23219 599 aa20.62■□□□□ 0.89
PKP3-208ENST00000531857 ZNF365Q70YC5 407 aa20.62■□□□□ 0.89
PKP3-208ENST00000531857 NEDD1Q8NHV4 660 aa20.62■□□□□ 0.89
PKP3-208ENST00000531857 AGBL1Q96MI9 1066 aa20.62■□□□□ 0.89
PKP3-208ENST00000531857 SEC62Q99442 399 aaKnown RBP20.62■□□□□ 0.89
PKP3-208ENST00000531857 ZNF287Q9HBT7 754 aa20.62■□□□□ 0.89
PKP3-208ENST00000531857 PRDM6Q9NQX0 595 aa20.62■□□□□ 0.89
PKP3-208ENST00000531857 DDX49Q9Y6V7 483 aaKnown RBP20.62■□□□□ 0.89
PKP3-208ENST00000531857 ZNF536O15090 1300 aa20.61■□□□□ 0.89
PKP3-208ENST00000531857 SOWAHBA6NEL2 793 aa20.61■□□□□ 0.89
PKP3-208ENST00000531857 CD4P01730 458 aa20.61■□□□□ 0.89
PKP3-208ENST00000531857 TSPY3P0CV98 308 aa20.61■□□□□ 0.89
PKP3-208ENST00000531857 TSPY8P0CW00 308 aa20.61■□□□□ 0.89
PKP3-208ENST00000531857 CYP2C18P33260 490 aa20.61■□□□□ 0.89
PKP3-208ENST00000531857 NKX3-2P78367 333 aa20.61■□□□□ 0.89
PKP3-208ENST00000531857 CCDC129Q6ZRS4 1044 aa20.61■□□□□ 0.89
PKP3-208ENST00000531857 TMEM199Q8N511 208 aa20.61■□□□□ 0.89
PKP3-208ENST00000531857 DCTPP1Q9H773 170 aa20.61■□□□□ 0.89
PKP3-208ENST00000531857 ACAD9Q9H845 621 aa20.61■□□□□ 0.89
PKP3-208ENST00000531857 A1CFQ9NQ94 594 aaKnown RBP20.61■□□□□ 0.89
PKP3-208ENST00000531857 TFAP4Q01664 338 aa20.6■□□□□ 0.89
PKP3-208ENST00000531857 TNFAIP2Q03169 654 aa20.6■□□□□ 0.89
PKP3-208ENST00000531857 CXCL17Q6UXB2 119 aa20.6■□□□□ 0.89
PKP3-208ENST00000531857 SYMPKQ92797 1274 aaKnown RBP20.6■□□□□ 0.89
PKP3-208ENST00000531857 GPATCH3Q96I76 525 aa20.6■□□□□ 0.89
PKP3-208ENST00000531857 RNF146Q9NTX7 359 aa20.6■□□□□ 0.89
PKP3-208ENST00000531857 ISY1Q9ULR0 285 aaKnown RBP20.6■□□□□ 0.89
PKP3-208ENST00000531857 TLR3O15455 904 aaKnown RBP20.59■□□□□ 0.89
PKP3-208ENST00000531857 STAT2P52630 851 aa20.59■□□□□ 0.89
PKP3-208ENST00000531857 SNAP25P60880 206 aa20.59■□□□□ 0.89
PKP3-208ENST00000531857 ERICH6BQ5W0A0 696 aa20.59■□□□□ 0.89
PKP3-208ENST00000531857 CCDC174Q6PII3 467 aa20.59■□□□□ 0.89
PKP3-208ENST00000531857 NOL8Q76FK4 1167 aaKnown RBP20.59■□□□□ 0.89
PKP3-208ENST00000531857 PRDM12Q9H4Q4 367 aa20.59■□□□□ 0.89
PKP3-208ENST00000531857 CXXC1Q9P0U4 656 aaPredicted RBP20.59■□□□□ 0.89
PKP3-208ENST00000531857 GNEQ9Y223 722 aaKnown RBP20.59■□□□□ 0.89
PKP3-208ENST00000531857 UMODL1Q5DID0 1318 aa20.58■□□□□ 0.89
PKP3-208ENST00000531857 FDX1P10109 184 aa20.58■□□□□ 0.89
PKP3-208ENST00000531857 MCCP23508 829 aa20.58■□□□□ 0.89
PKP3-208ENST00000531857 PDE4BQ07343 736 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms