RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 PCDHB15Q9Y5E8 787 aa21.93■■□□□ 1.1
SSSCA1-206ENST00000531405 TMEM232C9JQI7 657 aa21.92■■□□□ 1.1
SSSCA1-206ENST00000531405 DUSP11O75319 330 aaKnown RBP21.92■■□□□ 1.1
SSSCA1-206ENST00000531405 C6orf222P0C671 652 aaPredicted RBP21.92■■□□□ 1.1
SSSCA1-206ENST00000531405 TFAP4Q01664 338 aa21.92■■□□□ 1.1
SSSCA1-206ENST00000531405 FPGSQ05932 587 aa21.92■■□□□ 1.1
SSSCA1-206ENST00000531405 PDE4BQ07343 736 aa21.92■■□□□ 1.1
SSSCA1-206ENST00000531405 CCDC144BQ3MJ40 725 aa21.92■■□□□ 1.1
SSSCA1-206ENST00000531405 ARMCX2Q7L311 632 aa21.92■■□□□ 1.1
SSSCA1-206ENST00000531405 ANKRD33Q7Z3H0 272 aa21.92■■□□□ 1.1
SSSCA1-206ENST00000531405 CHST13Q8NET6 341 aa21.92■■□□□ 1.1
SSSCA1-206ENST00000531405 NAPBQ9H115 298 aa21.92■■□□□ 1.1
SSSCA1-206ENST00000531405 SYNPO2Q9UMS6 1093 aa21.92■■□□□ 1.1
SSSCA1-206ENST00000531405 MYO9BQ13459 2157 aa21.92■■□□□ 1.1
SSSCA1-206ENST00000531405 GBF1Q92538 1859 aa21.92■■□□□ 1.1
SSSCA1-206ENST00000531405 MOXD2PA6NHM9 499 aa21.91■■□□□ 1.1
SSSCA1-206ENST00000531405 DCDC2CA8MYV0 355 aa21.91■■□□□ 1.1
SSSCA1-206ENST00000531405 OAZ1P54368 228 aa21.91■■□□□ 1.1
SSSCA1-206ENST00000531405 CNTN2Q02246 1040 aa21.91■■□□□ 1.1
SSSCA1-206ENST00000531405 PPARAQ07869 468 aa21.91■■□□□ 1.1
SSSCA1-206ENST00000531405 LRRFIP1Q32MZ4 808 aaKnown RBP21.91■■□□□ 1.1
SSSCA1-206ENST00000531405 ZMYM1Q5SVZ6 1142 aa21.91■■□□□ 1.1
SSSCA1-206ENST00000531405 MYLIPQ8WY64 445 aa21.91■■□□□ 1.1
SSSCA1-206ENST00000531405 TOX2Q96NM4 488 aa21.91■■□□□ 1.1
SSSCA1-206ENST00000531405 COL25A1Q9BXS0 654 aaPredicted RBP21.91■■□□□ 1.1
SSSCA1-206ENST00000531405 ABHD16BQ9H3Z7 469 aa21.91■■□□□ 1.1
SSSCA1-206ENST00000531405 FBXO40Q9UH90 709 aa21.91■■□□□ 1.1
SSSCA1-206ENST00000531405 SPTBN5Q9NRC6 3674 aaKnown RBP21.91■■□□□ 1.1
SSSCA1-206ENST00000531405 CHD9Q3L8U1 2897 aa21.91■■□□□ 1.1
SSSCA1-206ENST00000531405 ERC2O15083 957 aa21.9■■□□□ 1.1
SSSCA1-206ENST00000531405 CCDC129Q6ZRS4 1044 aa21.9■■□□□ 1.1
SSSCA1-206ENST00000531405 RASGRP2Q7LDG7 609 aa21.9■■□□□ 1.1
SSSCA1-206ENST00000531405 CCDC144CPQ8IYA2 1237 aa21.9■■□□□ 1.1
SSSCA1-206ENST00000531405 INCENPQ9NQS7 918 aa21.9■■□□□ 1.1
SSSCA1-206ENST00000531405 FOXP2O15409 715 aa21.89■■□□□ 1.09
SSSCA1-206ENST00000531405 ASGR1P07306 291 aa21.89■■□□□ 1.09
SSSCA1-206ENST00000531405 SLC3A2P08195 630 aaKnown RBP21.89■■□□□ 1.09
SSSCA1-206ENST00000531405 CST5P28325 142 aaPredicted RBP21.89■■□□□ 1.09
SSSCA1-206ENST00000531405 STAT2P52630 851 aa21.89■■□□□ 1.09
SSSCA1-206ENST00000531405 CTDSPL2Q05D32 466 aa21.89■■□□□ 1.09
SSSCA1-206ENST00000531405 IKQ13123 557 aaPredicted RBP21.89■■□□□ 1.09
SSSCA1-206ENST00000531405 AGBL1Q96MI9 1066 aa21.89■■□□□ 1.09
SSSCA1-206ENST00000531405 GLT1D1Q96MS3 346 aa21.89■■□□□ 1.09
SSSCA1-206ENST00000531405 KATNBL1Q9H079 304 aa21.89■■□□□ 1.09
SSSCA1-206ENST00000531405 UPF3AQ9H1J1 476 aaKnown RBP21.89■■□□□ 1.09
SSSCA1-206ENST00000531405 ZNF536O15090 1300 aa21.88■■□□□ 1.09
SSSCA1-206ENST00000531405 NMT2O60551 498 aa21.88■■□□□ 1.09
SSSCA1-206ENST00000531405 MCCP23508 829 aa21.88■■□□□ 1.09
SSSCA1-206ENST00000531405 GJA9P57773 515 aa21.88■■□□□ 1.09
SSSCA1-206ENST00000531405 SNAP25P60880 206 aa21.88■■□□□ 1.09
SSSCA1-206ENST00000531405 MAFAQ8NHW3 353 aaPredicted RBP21.88■■□□□ 1.09
SSSCA1-206ENST00000531405 VTI1AQ96AJ9 217 aa21.88■■□□□ 1.09
SSSCA1-206ENST00000531405 ACAD9Q9H845 621 aa21.88■■□□□ 1.09
SSSCA1-206ENST00000531405 A1CFQ9NQ94 594 aaKnown RBP21.88■■□□□ 1.09
SSSCA1-206ENST00000531405 RNF146Q9NTX7 359 aa21.88■■□□□ 1.09
SSSCA1-206ENST00000531405 TBX21Q9UL17 535 aa21.88■■□□□ 1.09
SSSCA1-206ENST00000531405 DDX49Q9Y6V7 483 aaKnown RBP21.88■■□□□ 1.09
SSSCA1-206ENST00000531405 ELP1O95163 1332 aa21.87■■□□□ 1.09
SSSCA1-206ENST00000531405 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.87■■□□□ 1.09
SSSCA1-206ENST00000531405 TIMP1P01033 207 aa21.87■■□□□ 1.09
SSSCA1-206ENST00000531405 MX1P20591 662 aa21.87■■□□□ 1.09
SSSCA1-206ENST00000531405 SLC1A4P43007 532 aa21.87■■□□□ 1.09
SSSCA1-206ENST00000531405 CDK7P50613 346 aa21.87■■□□□ 1.09
SSSCA1-206ENST00000531405 GNASQ5JWF2 1037 aa21.87■■□□□ 1.09
SSSCA1-206ENST00000531405 KCTD1Q719H9 257 aa21.87■■□□□ 1.09
SSSCA1-206ENST00000531405 FAM133AQ8N9E0 248 aa21.87■■□□□ 1.09
SSSCA1-206ENST00000531405 PCSK9Q8NBP7 692 aaKnown RBP21.87■■□□□ 1.09
SSSCA1-206ENST00000531405 STAG1Q8WVM7 1258 aa21.87■■□□□ 1.09
SSSCA1-206ENST00000531405 GMCL1Q96IK5 515 aa21.87■■□□□ 1.09
SSSCA1-206ENST00000531405 SPC25Q9HBM1 224 aa21.87■■□□□ 1.09
SSSCA1-206ENST00000531405 STX8Q9UNK0 236 aa21.87■■□□□ 1.09
SSSCA1-206ENST00000531405 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.87■■□□□ 1.09
SSSCA1-206ENST00000531405 SOWAHBA6NEL2 793 aa21.86■■□□□ 1.09
SSSCA1-206ENST00000531405 CTAGE5O15320 804 aa21.86■■□□□ 1.09
SSSCA1-206ENST00000531405 FDX1P10109 184 aa21.86■■□□□ 1.09
SSSCA1-206ENST00000531405 BEX3Q00994 111 aa21.86■■□□□ 1.09
SSSCA1-206ENST00000531405 CCDC174Q6PII3 467 aa21.86■■□□□ 1.09
SSSCA1-206ENST00000531405 FAM160B2Q86V87 743 aa21.86■■□□□ 1.09
SSSCA1-206ENST00000531405 CHURC1Q8WUH1 139 aa21.86■■□□□ 1.09
SSSCA1-206ENST00000531405 IL17RBQ9NRM6 502 aa21.86■■□□□ 1.09
SSSCA1-206ENST00000531405 MTMR7Q9Y216 660 aa21.86■■□□□ 1.09
SSSCA1-206ENST00000531405 ASTN1O14525 1302 aa21.85■■□□□ 1.09
SSSCA1-206ENST00000531405 MROH7Q68CQ1 1323 aa21.85■■□□□ 1.09
SSSCA1-206ENST00000531405 TSPY2A6NKD2 308 aa21.85■■□□□ 1.09
SSSCA1-206ENST00000531405 ALAS1P13196 640 aa21.85■■□□□ 1.09
SSSCA1-206ENST00000531405 PTGS1P23219 599 aa21.85■■□□□ 1.09
SSSCA1-206ENST00000531405 TRERF1Q96PN7 1200 aa21.85■■□□□ 1.09
SSSCA1-206ENST00000531405 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.85■■□□□ 1.094e-6■■■■□ 21.2
SSSCA1-206ENST00000531405 SALL3Q9BXA9 1300 aa21.84■■□□□ 1.09
SSSCA1-206ENST00000531405 A0A0U1RQG5 324 aaPredicted RBP21.84■■□□□ 1.09
SSSCA1-206ENST00000531405 ARVCFO00192 962 aa21.84■■□□□ 1.09
SSSCA1-206ENST00000531405 FOSL2P15408 326 aa21.84■■□□□ 1.09
SSSCA1-206ENST00000531405 TNFAIP2Q03169 654 aa21.84■■□□□ 1.09
SSSCA1-206ENST00000531405 MUM1L1Q5H9M0 696 aa21.84■■□□□ 1.09
SSSCA1-206ENST00000531405 VPS53Q5VIR6 699 aa21.84■■□□□ 1.09
SSSCA1-206ENST00000531405 MFSD5Q6N075 450 aa21.84■■□□□ 1.09
SSSCA1-206ENST00000531405 NOL8Q76FK4 1167 aaKnown RBP21.84■■□□□ 1.09
SSSCA1-206ENST00000531405 PPP1R12CQ9BZL4 782 aa21.84■■□□□ 1.09
SSSCA1-206ENST00000531405 CHD7Q9P2D1 2997 aa21.83■■□□□ 1.09
SSSCA1-206ENST00000531405 DNAJB2P25686 324 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms