RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 TAF7Q15545 349 aaPredicted RBP9.03□□□□□ -0.96
CSDE1-214ENST00000530886 AACSQ86V21 672 aa9.03□□□□□ -0.96
CSDE1-214ENST00000530886 PI4KAP1Q8N8J0 262 aa9.03□□□□□ -0.96
CSDE1-214ENST00000530886 CENPTQ96BT3 561 aa9.03□□□□□ -0.96
CSDE1-214ENST00000530886 LRRC2Q9BYS8 371 aa9.03□□□□□ -0.96
CSDE1-214ENST00000530886 CTNNAL1Q9UBT7 734 aa9.03□□□□□ -0.96
CSDE1-214ENST00000530886 LIMA1Q9UHB6 759 aaKnown RBP9.03□□□□□ -0.96
CSDE1-214ENST00000530886 BAIAP2L1Q9UHR4 511 aa9.03□□□□□ -0.96
CSDE1-214ENST00000530886 DMGDHQ9UI17 866 aaKnown RBP9.03□□□□□ -0.96
CSDE1-214ENST00000530886 KCNH3Q9ULD8 1083 aa9.03□□□□□ -0.96
CSDE1-214ENST00000530886 SLIT3O75094 1523 aa9.03□□□□□ -0.96
CSDE1-214ENST00000530886 NFAT5O94916 1531 aa9.03□□□□□ -0.96
CSDE1-214ENST00000530886 KRT14P02533 472 aa9.03□□□□□ -0.96
CSDE1-214ENST00000530886 CTCFP49711 727 aaPredicted RBP9.03□□□□□ -0.96
CSDE1-214ENST00000530886 HERVK_113P62684 666 aa9.03□□□□□ -0.96
CSDE1-214ENST00000530886 KRT83P78385 493 aa9.03□□□□□ -0.96
CSDE1-214ENST00000530886 MRPS35P82673 323 aaKnown RBP9.03□□□□□ -0.96
CSDE1-214ENST00000530886 C2orf54Q08AI8 447 aa9.03□□□□□ -0.96
CSDE1-214ENST00000530886 CDC37Q16543 378 aaPredicted RBP9.03□□□□□ -0.96
CSDE1-214ENST00000530886 GKAP1Q5VSY0 366 aaPredicted RBP9.03□□□□□ -0.96
CSDE1-214ENST00000530886 HAUS3Q68CZ6 603 aa9.03□□□□□ -0.96
CSDE1-214ENST00000530886 KANK3Q6NY19 840 aa9.03□□□□□ -0.96
CSDE1-214ENST00000530886 MIPOL1Q8TD10 442 aa9.03□□□□□ -0.96
CSDE1-214ENST00000530886 AGAP11Q8TF27 550 aa9.03□□□□□ -0.96
CSDE1-214ENST00000530886 NECTIN2Q92692 538 aa9.03□□□□□ -0.96
CSDE1-214ENST00000530886 LRRC1Q9BTT6 524 aa9.03□□□□□ -0.96
CSDE1-214ENST00000530886 FSD1Q9BTV5 496 aa9.03□□□□□ -0.96
CSDE1-214ENST00000530886 ZNF232Q9UNY5 417 aa9.03□□□□□ -0.96
CSDE1-214ENST00000530886 GNAT3A8MTJ3 354 aa9.03□□□□□ -0.96
CSDE1-214ENST00000530886 SRGAP2O75044 1071 aa9.03□□□□□ -0.96
CSDE1-214ENST00000530886 PENKP01210 267 aaPredicted RBP9.03□□□□□ -0.96
CSDE1-214ENST00000530886 PAK2Q13177 524 aa9.03□□□□□ -0.96
CSDE1-214ENST00000530886 BIRC3Q13489 604 aa9.03□□□□□ -0.96
CSDE1-214ENST00000530886 CUL4BQ13620 913 aa9.03□□□□□ -0.96
CSDE1-214ENST00000530886 HIBCHQ6NVY1 386 aaPredicted RBP9.03□□□□□ -0.96
CSDE1-214ENST00000530886 APBB1IPQ7Z5R6 666 aaPredicted RBP9.03□□□□□ -0.96
CSDE1-214ENST00000530886 CCDC63Q8NA47 563 aa9.03□□□□□ -0.96
CSDE1-214ENST00000530886 WHAMMQ8TF30 809 aa9.03□□□□□ -0.96
CSDE1-214ENST00000530886 FAM163AQ96GL9 167 aaPredicted RBP9.03□□□□□ -0.96
CSDE1-214ENST00000530886 DNAJC7Q99615 494 aa9.03□□□□□ -0.96
CSDE1-214ENST00000530886 TAF1DQ9H5J8 278 aaPredicted RBP9.03□□□□□ -0.96
CSDE1-214ENST00000530886 GUCA1BQ9UMX6 200 aa9.03□□□□□ -0.96
CSDE1-214ENST00000530886 SNX12Q9UMY4 172 aa9.03□□□□□ -0.96
CSDE1-214ENST00000530886 TIAM2Q8IVF5 1701 aa9.02□□□□□ -0.97
CSDE1-214ENST00000530886 GOLGA6L10A6NI86 522 aa9.02□□□□□ -0.97
CSDE1-214ENST00000530886 E7ENQ6 273 aa9.02□□□□□ -0.97
CSDE1-214ENST00000530886 ENC1O14682 589 aa9.02□□□□□ -0.97
CSDE1-214ENST00000530886 FOXN1O15353 648 aa9.02□□□□□ -0.97
CSDE1-214ENST00000530886 KRT86O43790 486 aa9.02□□□□□ -0.97
CSDE1-214ENST00000530886 ORC4O43929 436 aa9.02□□□□□ -0.97
CSDE1-214ENST00000530886 TRIM37O94972 964 aa9.02□□□□□ -0.97
CSDE1-214ENST00000530886 QPCTQ16769 361 aa9.02□□□□□ -0.97
CSDE1-214ENST00000530886 LRRC23Q53EV4 343 aaPredicted RBP9.02□□□□□ -0.97
CSDE1-214ENST00000530886 NUGGCQ68CJ6 796 aa9.02□□□□□ -0.97
CSDE1-214ENST00000530886 CCDC129Q6ZRS4 1044 aa9.02□□□□□ -0.97
CSDE1-214ENST00000530886 SPATA4Q8NEY3 305 aa9.02□□□□□ -0.97
CSDE1-214ENST00000530886 CAGE1Q8TC20 777 aa9.02□□□□□ -0.97
CSDE1-214ENST00000530886 SLF1Q9BQI6 1058 aa9.02□□□□□ -0.97
CSDE1-214ENST00000530886 PLCB1Q9NQ66 1216 aa9.02□□□□□ -0.97
CSDE1-214ENST00000530886 CHPF2Q9P2E5 772 aa9.02□□□□□ -0.97
CSDE1-214ENST00000530886 ROBO2Q9HCK4 1378 aa9.02□□□□□ -0.97
CSDE1-214ENST00000530886 HSPA9P38646 679 aaKnown RBP9.02□□□□□ -0.97
CSDE1-214ENST00000530886 PSMC4P43686 418 aa9.02□□□□□ -0.97
CSDE1-214ENST00000530886 VAV2P52735 878 aa9.02□□□□□ -0.97
CSDE1-214ENST00000530886 GUCY1B3Q02153 619 aa9.02□□□□□ -0.97
CSDE1-214ENST00000530886 AGBL2Q5U5Z8 902 aa9.02□□□□□ -0.97
CSDE1-214ENST00000530886 KCTD16Q68DU8 428 aa9.02□□□□□ -0.97
CSDE1-214ENST00000530886 SESTD1Q86VW0 696 aa9.02□□□□□ -0.97
CSDE1-214ENST00000530886 CCDC155Q8N6L0 562 aa9.02□□□□□ -0.97
CSDE1-214ENST00000530886 AIDAQ96BJ3 306 aa9.02□□□□□ -0.97
CSDE1-214ENST00000530886 OSBPL1AQ9BXW6 950 aa9.02□□□□□ -0.97
CSDE1-214ENST00000530886 GJB4Q9NTQ9 266 aa9.02□□□□□ -0.97
CSDE1-214ENST00000530886 DBNLQ9UJU6 430 aaKnown RBP9.02□□□□□ -0.97
CSDE1-214ENST00000530886 PHF24Q9UPV7 400 aa9.02□□□□□ -0.97
CSDE1-214ENST00000530886 LRRC42Q9Y546 428 aa9.02□□□□□ -0.97
CSDE1-214ENST00000530886 DLEC1Q9Y238 1755 aa9.02□□□□□ -0.97
CSDE1-214ENST00000530886 DRD4P21917 467 aa9.01□□□□□ -0.97
CSDE1-214ENST00000530886 CACNA2D4Q7Z3S7 1137 aa9.01□□□□□ -0.97
CSDE1-214ENST00000530886 IFT20Q8IY31 132 aa9.01□□□□□ -0.97
CSDE1-214ENST00000530886 HDAC7Q8WUI4 952 aa9.01□□□□□ -0.97
CSDE1-214ENST00000530886 SUCLG2Q96I99 432 aa9.01□□□□□ -0.97
CSDE1-214ENST00000530886 TRAPPC9Q96Q05 1148 aa9.01□□□□□ -0.97
CSDE1-214ENST00000530886 SWAP70Q9UH65 585 aa9.01□□□□□ -0.97
CSDE1-214ENST00000530886 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.01□□□□□ -0.973e-6■■■■□ 21.1
CSDE1-214ENST00000530886 DOCK2Q92608 1830 aa9.01□□□□□ -0.97
CSDE1-214ENST00000530886 ASAP2O43150 1006 aa9.01□□□□□ -0.97
CSDE1-214ENST00000530886 SMIM24O75264 130 aa9.01□□□□□ -0.97
CSDE1-214ENST00000530886 POLR3DP05423 398 aaPredicted RBP9.01□□□□□ -0.97
CSDE1-214ENST00000530886 CSB-PGBD3P0DP91 1061 aa9.01□□□□□ -0.97
CSDE1-214ENST00000530886 PPP1R7Q15435 360 aa9.01□□□□□ -0.97
CSDE1-214ENST00000530886 MEA1Q16626 185 aa9.01□□□□□ -0.97
CSDE1-214ENST00000530886 PABPC1LQ4VXU2 614 aaKnown RBP9.01□□□□□ -0.97
CSDE1-214ENST00000530886 EPHA10Q5JZY3 1008 aa9.01□□□□□ -0.97
CSDE1-214ENST00000530886 NKX2-3Q8TAU0 364 aa9.01□□□□□ -0.97
CSDE1-214ENST00000530886 RBM17Q96I25 401 aaKnown RBP9.01□□□□□ -0.97
CSDE1-214ENST00000530886 CCDC43Q96MW1 224 aaKnown RBP9.01□□□□□ -0.97
CSDE1-214ENST00000530886 CWC25Q9NXE8 425 aaPredicted RBP9.01□□□□□ -0.97
CSDE1-214ENST00000530886 GMEB1Q9Y692 573 aa9.01□□□□□ -0.97
CSDE1-214ENST00000530886 GOLGA6L10A0A0M3HER8 536 aa9.01□□□□□ -0.97
CSDE1-214ENST00000530886 LRRD1A4D1F6 860 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms