RNA–Protein interactions for RNA: ENST00000530730.1

CHKA-205, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-205ENST00000530730 SNX11Q9Y5W9 270 aa9.94□□□□□ -0.82
CHKA-205ENST00000530730 U3KQE9 123 aa9.94□□□□□ -0.82
CHKA-205ENST00000530730 P4HBP07237 508 aaKnown RBP9.93□□□□□ -0.82
CHKA-205ENST00000530730 PLCL1Q15111 1095 aa9.93□□□□□ -0.82
CHKA-205ENST00000530730 PPM1JQ5JR12 505 aa9.93□□□□□ -0.82
CHKA-205ENST00000530730 ZBTB37Q5TC79 503 aa9.93□□□□□ -0.82
CHKA-205ENST00000530730 SV2BQ7L1I2 683 aa9.93□□□□□ -0.82
CHKA-205ENST00000530730 TOP6BLQ8N6T0 577 aa9.93□□□□□ -0.82
CHKA-205ENST00000530730 ZCRB1Q8TBF4 217 aaKnown RBP9.93□□□□□ -0.82
CHKA-205ENST00000530730 FYB1O15117 783 aa9.92□□□□□ -0.82
CHKA-205ENST00000530730 FBXO24O75426 580 aa9.92□□□□□ -0.82
CHKA-205ENST00000530730 USP17L7P0C7H9 530 aa9.92□□□□□ -0.82
CHKA-205ENST00000530730 ZNF792Q3KQV3 632 aa9.92□□□□□ -0.82
CHKA-205ENST00000530730 RASIP1Q5U651 963 aa9.92□□□□□ -0.82
CHKA-205ENST00000530730 PCNX4Q63HM2 1172 aa9.92□□□□□ -0.82
CHKA-205ENST00000530730 SYTL4Q96C24 671 aaPredicted RBP9.92□□□□□ -0.82
CHKA-205ENST00000530730 HRASLS5Q96KN8 279 aa9.92□□□□□ -0.82
CHKA-205ENST00000530730 PRDM10Q9NQV6 1147 aa9.92□□□□□ -0.82
CHKA-205ENST00000530730 GTF2IRD1Q9UHL9 959 aa9.92□□□□□ -0.82
CHKA-205ENST00000530730 PLAGL2Q9UPG8 496 aa9.92□□□□□ -0.82
CHKA-205ENST00000530730 USP54Q70EL1 1684 aa9.92□□□□□ -0.82
CHKA-205ENST00000530730 NHSQ6T4R5 1651 aa9.91□□□□□ -0.82
CHKA-205ENST00000530730 LDHBP07195 334 aaKnown RBP9.91□□□□□ -0.82
CHKA-205ENST00000530730 CD8BP10966 210 aa9.91□□□□□ -0.82
CHKA-205ENST00000530730 FGD1P98174 961 aa9.91□□□□□ -0.82
CHKA-205ENST00000530730 BNIP3Q12983 259 aa9.91□□□□□ -0.82
CHKA-205ENST00000530730 RRS1Q15050 365 aaKnown RBP9.91□□□□□ -0.82
CHKA-205ENST00000530730 NBPF6Q5VWK0 638 aa9.91□□□□□ -0.82
CHKA-205ENST00000530730 NBPF4Q96M43 638 aa9.91□□□□□ -0.82
CHKA-205ENST00000530730 HEXIM2Q96MH2 286 aaKnown RBP9.91□□□□□ -0.82
CHKA-205ENST00000530730 PCDHA4Q9UN74 947 aa9.91□□□□□ -0.82
CHKA-205ENST00000530730 MYOM1P52179 1685 aa9.9□□□□□ -0.82
CHKA-205ENST00000530730 BIN1O00499 593 aa9.9□□□□□ -0.82
CHKA-205ENST00000530730 PAPLNO95428 1278 aa9.9□□□□□ -0.82
CHKA-205ENST00000530730 CELA3AP09093 270 aa9.9□□□□□ -0.82
CHKA-205ENST00000530730 GNA15P30679 374 aa9.9□□□□□ -0.82
CHKA-205ENST00000530730 ARHGAP27Q6ZUM4 889 aa9.9□□□□□ -0.82
CHKA-205ENST00000530730 TFCP2L1Q9NZI6 479 aa9.9□□□□□ -0.82
CHKA-205ENST00000530730 LTN1O94822 1766 aa9.9□□□□□ -0.82
CHKA-205ENST00000530730 ANKRD36BQ8N2N9 1353 aa9.89□□□□□ -0.83
CHKA-205ENST00000530730 PNPLA7Q6ZV29 1317 aa9.89□□□□□ -0.83
CHKA-205ENST00000530730 BTBD11A6QL63 1104 aa9.89□□□□□ -0.83
CHKA-205ENST00000530730 DCDC2CA8MYV0 355 aa9.89□□□□□ -0.83
CHKA-205ENST00000530730 TMF1P82094 1093 aa9.89□□□□□ -0.83
CHKA-205ENST00000530730 HSP90AB2PQ58FF8 381 aa9.89□□□□□ -0.83
CHKA-205ENST00000530730 ATG4DQ86TL0 474 aaPredicted RBP9.89□□□□□ -0.83
CHKA-205ENST00000530730 C12orf40Q86WS4 652 aa9.89□□□□□ -0.83
CHKA-205ENST00000530730 USHBP1Q8N6Y0 703 aa9.89□□□□□ -0.83
CHKA-205ENST00000530730 POU5F2Q8N7G0 328 aa9.89□□□□□ -0.83
CHKA-205ENST00000530730 MAP3K5Q99683 1374 aa9.88□□□□□ -0.83
CHKA-205ENST00000530730 PRPF40AO75400 957 aaKnown RBP9.88□□□□□ -0.83
CHKA-205ENST00000530730 POLD1P28340 1107 aa9.88□□□□□ -0.83
CHKA-205ENST00000530730 CAP2P40123 477 aa9.88□□□□□ -0.83
CHKA-205ENST00000530730 AOC3Q16853 763 aa9.88□□□□□ -0.83
CHKA-205ENST00000530730 CDC37L1Q7L3B6 337 aa9.88□□□□□ -0.83
CHKA-205ENST00000530730 CYFIP1Q7L576 1253 aa9.88□□□□□ -0.83
CHKA-205ENST00000530730 ZNF507Q8TCN5 953 aa9.88□□□□□ -0.83
CHKA-205ENST00000530730 PICK1Q9NRD5 415 aa9.88□□□□□ -0.83
CHKA-205ENST00000530730 CSADQ9Y600 493 aa9.88□□□□□ -0.83
CHKA-205ENST00000530730 PAPPAQ13219 1627 aa9.88□□□□□ -0.83
CHKA-205ENST00000530730 NSD2O96028 1365 aa9.88□□□□□ -0.83
CHKA-205ENST00000530730 CGNL1Q0VF96 1302 aa9.87□□□□□ -0.83
CHKA-205ENST00000530730 BTAF1O14981 1849 aa9.87□□□□□ -0.83
CHKA-205ENST00000530730 LRIG2O94898 1065 aa9.87□□□□□ -0.83
CHKA-205ENST00000530730 RPS26P62854 115 aaKnown RBP9.87□□□□□ -0.83
CHKA-205ENST00000530730 GPR162Q16538 588 aa9.87□□□□□ -0.83
CHKA-205ENST00000530730 OGFOD2Q6N063 350 aa9.87□□□□□ -0.83
CHKA-205ENST00000530730 UBE3DQ7Z6J8 389 aa9.87□□□□□ -0.83
CHKA-205ENST00000530730 RAPGEF4Q8WZA2 1011 aa9.87□□□□□ -0.83
CHKA-205ENST00000530730 GAL3ST3Q96A11 431 aa9.87□□□□□ -0.83
CHKA-205ENST00000530730 ELMO3Q96BJ8 720 aa9.87□□□□□ -0.83
CHKA-205ENST00000530730 CCNL1Q9UK58 526 aaPredicted RBP9.87□□□□□ -0.83
CHKA-205ENST00000530730 MEGF6O75095 1541 aa9.87□□□□□ -0.83
CHKA-205ENST00000530730 ANGEL2Q5VTE6 544 aaKnown RBP9.86□□□□□ -0.83
CHKA-205ENST00000530730 COL23A1Q86Y22 540 aaPredicted RBP9.86□□□□□ -0.83
CHKA-205ENST00000530730 MBNL3Q9NUK0 354 aaKnown RBP9.86□□□□□ -0.83
CHKA-205ENST00000530730 MAPK8IP1Q9UQF2 711 aa9.86□□□□□ -0.83
CHKA-205ENST00000530730 SNCAIPQ9Y6H5 919 aa9.86□□□□□ -0.83
CHKA-205ENST00000530730 RTL1A6NKG5 1358 aa9.86□□□□□ -0.83
CHKA-205ENST00000530730 USP47Q96K76 1375 aa9.86□□□□□ -0.83
CHKA-205ENST00000530730 KAT6BQ8WYB5 2073 aa9.86□□□□□ -0.83
CHKA-205ENST00000530730 GOLGB1Q14789 3259 aaKnown RBP9.85□□□□□ -0.83
CHKA-205ENST00000530730 EOMESO95936 686 aa9.85□□□□□ -0.83
CHKA-205ENST00000530730 RNASE1P07998 156 aaKnown RBP9.85□□□□□ -0.83
CHKA-205ENST00000530730 EIF4BP23588 611 aaKnown RBP9.85□□□□□ -0.83
CHKA-205ENST00000530730 LRFN4Q6PJG9 635 aa9.85□□□□□ -0.83
CHKA-205ENST00000530730 C22orf34Q6ZV56 151 aa9.85□□□□□ -0.83
CHKA-205ENST00000530730 ARMCX6Q7L4S7 300 aa9.85□□□□□ -0.83
CHKA-205ENST00000530730 HDXQ7Z353 690 aa9.85□□□□□ -0.83
CHKA-205ENST00000530730 SPACA3Q8IXA5 215 aa9.85□□□□□ -0.83
CHKA-205ENST00000530730 NLGN2Q8NFZ4 835 aa9.85□□□□□ -0.83
CHKA-205ENST00000530730 ASB11Q8WXH4 323 aa9.85□□□□□ -0.83
CHKA-205ENST00000530730 KRTAP9-9Q9BYP9 154 aa9.85□□□□□ -0.83
CHKA-205ENST00000530730 KRTAP9-4Q9BYQ2 154 aa9.85□□□□□ -0.83
CHKA-205ENST00000530730 ADAMTS6Q9UKP5 1117 aa9.85□□□□□ -0.83
CHKA-205ENST00000530730 TTF2Q9UNY4 1162 aaKnown RBP9.85□□□□□ -0.83
CHKA-205ENST00000530730 INSRP06213 1382 aa9.85□□□□□ -0.83
CHKA-205ENST00000530730 CYP27B1O15528 508 aa9.84□□□□□ -0.83
CHKA-205ENST00000530730 CLCN7P51798 805 aa9.84□□□□□ -0.83
CHKA-205ENST00000530730 INPP5AQ14642 412 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms