RNA–Protein interactions for RNA: ENST00000530513.5

PACSIN3-207, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-207ENST00000530513 CHST13Q8NET6 341 aa26.59■■□□□ 1.85
PACSIN3-207ENST00000530513 CHMP4CQ96CF2 233 aa26.59■■□□□ 1.85
PACSIN3-207ENST00000530513 FBXO40Q9UH90 709 aa26.59■■□□□ 1.85
PACSIN3-207ENST00000530513 ISY1Q9ULR0 285 aaKnown RBP26.59■■□□□ 1.85
PACSIN3-207ENST00000530513 MOXD2PA6NHM9 499 aa26.58■■□□□ 1.85
PACSIN3-207ENST00000530513 DUSP11O75319 330 aaKnown RBP26.58■■□□□ 1.85
PACSIN3-207ENST00000530513 RAG1P15918 1043 aa26.58■■□□□ 1.85
PACSIN3-207ENST00000530513 SMAD3P84022 425 aaKnown RBP26.58■■□□□ 1.85
PACSIN3-207ENST00000530513 KCNA10Q16322 511 aa26.58■■□□□ 1.85
PACSIN3-207ENST00000530513 ARMCX2Q7L311 632 aa26.58■■□□□ 1.85
PACSIN3-207ENST00000530513 NUP133Q8WUM0 1156 aa26.58■■□□□ 1.85
PACSIN3-207ENST00000530513 CDX2Q99626 313 aaPredicted RBP26.58■■□□□ 1.85
PACSIN3-207ENST00000530513 TMEM39AQ9NV64 488 aa26.58■■□□□ 1.85
PACSIN3-207ENST00000530513 TMEM232C9JQI7 657 aa26.57■■□□□ 1.84
PACSIN3-207ENST00000530513 MX1P20591 662 aa26.57■■□□□ 1.84
PACSIN3-207ENST00000530513 CST5P28325 142 aaPredicted RBP26.57■■□□□ 1.84
PACSIN3-207ENST00000530513 STAT2P52630 851 aa26.57■■□□□ 1.84
PACSIN3-207ENST00000530513 CCDC144BQ3MJ40 725 aa26.57■■□□□ 1.84
PACSIN3-207ENST00000530513 CCDC129Q6ZRS4 1044 aa26.57■■□□□ 1.84
PACSIN3-207ENST00000530513 RASGRP2Q7LDG7 609 aa26.57■■□□□ 1.84
PACSIN3-207ENST00000530513 RNPC3Q96LT9 517 aaKnown RBP26.57■■□□□ 1.84
PACSIN3-207ENST00000530513 TTYH1Q9H313 450 aaPredicted RBP26.57■■□□□ 1.84
PACSIN3-207ENST00000530513 ABHD16BQ9H3Z7 469 aa26.57■■□□□ 1.84
PACSIN3-207ENST00000530513 SALL3Q9BXA9 1300 aa26.57■■□□□ 1.84
PACSIN3-207ENST00000530513 SLC3A2P08195 630 aaKnown RBP26.56■■□□□ 1.84
PACSIN3-207ENST00000530513 C6orf222P0C671 652 aaPredicted RBP26.56■■□□□ 1.84
PACSIN3-207ENST00000530513 CNTN2Q02246 1040 aa26.56■■□□□ 1.84
PACSIN3-207ENST00000530513 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.56■■□□□ 1.84
PACSIN3-207ENST00000530513 GMCL1Q96IK5 515 aa26.56■■□□□ 1.84
PACSIN3-207ENST00000530513 TOX2Q96NM4 488 aa26.56■■□□□ 1.84
PACSIN3-207ENST00000530513 KATNBL1Q9H079 304 aa26.56■■□□□ 1.84
PACSIN3-207ENST00000530513 SEMA6BQ9H3T3 888 aa26.56■■□□□ 1.84
PACSIN3-207ENST00000530513 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.56■■□□□ 1.84
PACSIN3-207ENST00000530513 ZNF536O15090 1300 aa26.56■■□□□ 1.84
PACSIN3-207ENST00000530513 SPTBN5Q9NRC6 3674 aaKnown RBP26.56■■□□□ 1.84
PACSIN3-207ENST00000530513 FPGSQ05932 587 aa26.55■■□□□ 1.84
PACSIN3-207ENST00000530513 CCDC144CPQ8IYA2 1237 aa26.55■■□□□ 1.84
PACSIN3-207ENST00000530513 UPF3AQ9H1J1 476 aaKnown RBP26.55■■□□□ 1.84
PACSIN3-207ENST00000530513 ACAD9Q9H845 621 aa26.55■■□□□ 1.84
PACSIN3-207ENST00000530513 DCDC2CA8MYV0 355 aa26.54■■□□□ 1.84
PACSIN3-207ENST00000530513 ASGR1P07306 291 aa26.54■■□□□ 1.84
PACSIN3-207ENST00000530513 CTDSPL2Q05D32 466 aa26.54■■□□□ 1.84
PACSIN3-207ENST00000530513 IKQ13123 557 aaPredicted RBP26.54■■□□□ 1.84
PACSIN3-207ENST00000530513 FAM133AQ8N9E0 248 aa26.54■■□□□ 1.84
PACSIN3-207ENST00000530513 AGBL1Q96MI9 1066 aa26.54■■□□□ 1.84
PACSIN3-207ENST00000530513 GLT1D1Q96MS3 346 aa26.54■■□□□ 1.84
PACSIN3-207ENST00000530513 A1CFQ9NQ94 594 aaKnown RBP26.54■■□□□ 1.84
PACSIN3-207ENST00000530513 INCENPQ9NQS7 918 aa26.54■■□□□ 1.84
PACSIN3-207ENST00000530513 RNF146Q9NTX7 359 aa26.54■■□□□ 1.84
PACSIN3-207ENST00000530513 TBX21Q9UL17 535 aa26.54■■□□□ 1.84
PACSIN3-207ENST00000530513 NMT2O60551 498 aa26.53■■□□□ 1.84
PACSIN3-207ENST00000530513 MCCP23508 829 aa26.53■■□□□ 1.84
PACSIN3-207ENST00000530513 SLC1A4P43007 532 aa26.53■■□□□ 1.84
PACSIN3-207ENST00000530513 GJA9P57773 515 aa26.53■■□□□ 1.84
PACSIN3-207ENST00000530513 FAM160B2Q86V87 743 aa26.53■■□□□ 1.84
PACSIN3-207ENST00000530513 STX8Q9UNK0 236 aa26.53■■□□□ 1.84
PACSIN3-207ENST00000530513 ASTN1O14525 1302 aa26.52■■□□□ 1.84
PACSIN3-207ENST00000530513 ELP1O95163 1332 aa26.52■■□□□ 1.84
PACSIN3-207ENST00000530513 FDX1P10109 184 aa26.52■■□□□ 1.84
PACSIN3-207ENST00000530513 VPS53Q5VIR6 699 aa26.52■■□□□ 1.84
PACSIN3-207ENST00000530513 KCTD1Q719H9 257 aa26.52■■□□□ 1.84
PACSIN3-207ENST00000530513 STAG1Q8WVM7 1258 aa26.52■■□□□ 1.84
PACSIN3-207ENST00000530513 MYLIPQ8WY64 445 aa26.52■■□□□ 1.84
PACSIN3-207ENST00000530513 IL17RBQ9NRM6 502 aa26.52■■□□□ 1.84
PACSIN3-207ENST00000530513 MROH7Q68CQ1 1323 aa26.51■■□□□ 1.83
PACSIN3-207ENST00000530513 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.51■■□□□ 1.83
PACSIN3-207ENST00000530513 SOWAHBA6NEL2 793 aa26.51■■□□□ 1.83
PACSIN3-207ENST00000530513 TSPY2A6NKD2 308 aa26.51■■□□□ 1.83
PACSIN3-207ENST00000530513 CTAGE5O15320 804 aa26.51■■□□□ 1.83
PACSIN3-207ENST00000530513 SNAP25P60880 206 aa26.51■■□□□ 1.83
PACSIN3-207ENST00000530513 PCSK9Q8NBP7 692 aaKnown RBP26.51■■□□□ 1.83
PACSIN3-207ENST00000530513 CHURC1Q8WUH1 139 aa26.51■■□□□ 1.83
PACSIN3-207ENST00000530513 COL25A1Q9BXS0 654 aaPredicted RBP26.51■■□□□ 1.83
PACSIN3-207ENST00000530513 SPC25Q9HBM1 224 aa26.51■■□□□ 1.83
PACSIN3-207ENST00000530513 DDX49Q9Y6V7 483 aaKnown RBP26.51■■□□□ 1.83
PACSIN3-207ENST00000530513 TIMP1P01033 207 aa26.5■■□□□ 1.83
PACSIN3-207ENST00000530513 CDK7P50613 346 aa26.5■■□□□ 1.83
PACSIN3-207ENST00000530513 CCDC174Q6PII3 467 aa26.5■■□□□ 1.83
PACSIN3-207ENST00000530513 MAFAQ8NHW3 353 aaPredicted RBP26.5■■□□□ 1.83
PACSIN3-207ENST00000530513 ALAS1P13196 640 aa26.49■■□□□ 1.83
PACSIN3-207ENST00000530513 GNASQ5JWF2 1037 aa26.49■■□□□ 1.83
PACSIN3-207ENST00000530513 TRERF1Q96PN7 1200 aa26.49■■□□□ 1.83
PACSIN3-207ENST00000530513 PRR12Q9ULL5 1215 aa26.49■■□□□ 1.83
PACSIN3-207ENST00000530513 GBF1Q92538 1859 aa26.49■■□□□ 1.83
PACSIN3-207ENST00000530513 A0A0U1RQG5 324 aaPredicted RBP26.48■■□□□ 1.83
PACSIN3-207ENST00000530513 PLA2G6O60733 806 aa26.48■■□□□ 1.83
PACSIN3-207ENST00000530513 PTGS1P23219 599 aa26.48■■□□□ 1.83
PACSIN3-207ENST00000530513 RRP1P56182 461 aaKnown RBP26.48■■□□□ 1.83
PACSIN3-207ENST00000530513 BEX3Q00994 111 aa26.48■■□□□ 1.83
PACSIN3-207ENST00000530513 MUM1L1Q5H9M0 696 aa26.48■■□□□ 1.83
PACSIN3-207ENST00000530513 PPP4R3BQ5MIZ7 849 aa26.48■■□□□ 1.83
PACSIN3-207ENST00000530513 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.48■■□□□ 1.833e-10■□□□□ 8.9
PACSIN3-207ENST00000530513 MTMR7Q9Y216 660 aa26.48■■□□□ 1.83
PACSIN3-207ENST00000530513 ARVCFO00192 962 aa26.47■■□□□ 1.83
PACSIN3-207ENST00000530513 NKX3-2P78367 333 aa26.47■■□□□ 1.83
PACSIN3-207ENST00000530513 TKFCQ3LXA3 575 aa26.47■■□□□ 1.83
PACSIN3-207ENST00000530513 RCSD1Q6JBY9 416 aa26.47■■□□□ 1.83
PACSIN3-207ENST00000530513 FAM126BQ8IXS8 530 aa26.47■■□□□ 1.83
PACSIN3-207ENST00000530513 VTI1AQ96AJ9 217 aa26.47■■□□□ 1.83
PACSIN3-207ENST00000530513 ANAPC4Q9UJX5 808 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 193.3 ms