RNA–Protein interactions for RNA: ENST00000530459.1

GMDS-207, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-207ENST00000530459 RWDD2AQ9UIY3 292 aa5.59□□□□□ -1.51
GMDS-207ENST00000530459 CORO1CQ9ULV4 474 aaPredicted RBP5.59□□□□□ -1.51
GMDS-207ENST00000530459 GUCA1BQ9UMX6 200 aa5.59□□□□□ -1.51
GMDS-207ENST00000530459 COL22A1Q8NFW1 1626 aaPredicted RBP5.59□□□□□ -1.52
GMDS-207ENST00000530459 A0A1W2PQJ5 194 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 GRID2IPA4D2P6 1211 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 A6NHS1 94 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 TTC36A6NLP5 189 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 H7C1D1 291 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 H7C1W4 665 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 DNM1LO00429 736 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 IFIT3O14879 490 aaKnown RBP5.58□□□□□ -1.52
GMDS-207ENST00000530459 N4BP3O15049 544 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 POLR2DO15514 142 aaKnown RBP5.58□□□□□ -1.52
GMDS-207ENST00000530459 PPIP5K2O43314 1243 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 TRAPPC3O43617 180 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 LCA5LO95447 670 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 PECAM1P16284 738 aaPredicted RBP5.58□□□□□ -1.52
GMDS-207ENST00000530459 EIF2S2P20042 333 aaKnown RBP5.58□□□□□ -1.52
GMDS-207ENST00000530459 HOXC9P31274 260 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 HNRNPH3P31942 346 aaKnown RBP5.58□□□□□ -1.52
GMDS-207ENST00000530459 HSPA9P38646 679 aaKnown RBP5.58□□□□□ -1.52
GMDS-207ENST00000530459 SCTRP47872 440 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 HDGFP51858 240 aaKnown RBP5.58□□□□□ -1.52
GMDS-207ENST00000530459 RCAN1P53805 252 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 ANTXR2P58335 489 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 HDLBPQ00341 1268 aaKnown RBP5.58□□□□□ -1.52
GMDS-207ENST00000530459 PTPN12Q05209 780 aaKnown RBP5.58□□□□□ -1.52
GMDS-207ENST00000530459 EN1Q05925 392 aaPredicted RBP5.58□□□□□ -1.52
GMDS-207ENST00000530459 IFT88Q13099 833 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 PAK2Q13177 524 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 KRT31Q15323 416 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 TTF1Q15361 905 aaPredicted RBP5.58□□□□□ -1.52
GMDS-207ENST00000530459 NTRK3Q16288 839 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 CDC37Q16543 378 aaPredicted RBP5.58□□□□□ -1.52
GMDS-207ENST00000530459 PTPN21Q16825 1174 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 CCDC38Q502W7 563 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 CMPK2Q5EBM0 449 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 TCP11X2Q5H9J9 407 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 SPECC1Q5M775 1068 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 CFAP58Q5T655 872 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 RNF187Q5TA31 235 aaPredicted RBP5.58□□□□□ -1.52
GMDS-207ENST00000530459 HAUS3Q68CZ6 603 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 WDR59Q6PJI9 974 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.58□□□□□ -1.52
GMDS-207ENST00000530459 SGMS1Q86VZ5 419 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 NOSTRINQ8IVI9 506 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 IFT20Q8IY31 132 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 SPATA4Q8NEY3 305 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 RASSF8Q8NHQ8 419 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 ZNF507Q8TCN5 953 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 MICAL1Q8TDZ2 1067 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 NOC3LQ8WTT2 800 aaKnown RBP5.58□□□□□ -1.52
GMDS-207ENST00000530459 ZFAND2BQ8WV99 257 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 CPLX3Q8WVH0 158 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 PIK3R5Q8WYR1 880 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 CCT6BQ92526 530 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 CUL5Q93034 780 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 CNKSR1Q969H4 720 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 EDC3Q96F86 508 aaKnown RBP5.58□□□□□ -1.52
GMDS-207ENST00000530459 ACSBG1Q96GR2 724 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 TMEM87BQ96K49 555 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 PHOX2BQ99453 314 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 NUP88Q99567 741 aaPredicted RBP5.58□□□□□ -1.52
GMDS-207ENST00000530459 MTA3Q9BTC8 594 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 LRRC1Q9BTT6 524 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 TMX4Q9H1E5 349 aaPredicted RBP5.58□□□□□ -1.52
GMDS-207ENST00000530459 TMBIM4Q9HC24 238 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 PLCB1Q9NQ66 1216 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 FAM217BQ9NTX9 383 aaPredicted RBP5.58□□□□□ -1.52
GMDS-207ENST00000530459 PAG1Q9NWQ8 432 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 HDAC6Q9UBN7 1215 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 SLC12A6Q9UHW9 1150 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 DMGDHQ9UI17 866 aaKnown RBP5.58□□□□□ -1.52
GMDS-207ENST00000530459 TSKSQ9UJT2 592 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 C15orf41Q9Y2V0 281 aa5.58□□□□□ -1.52
GMDS-207ENST00000530459 LUC7L2Q9Y383 392 aaKnown RBP5.58□□□□□ -1.52
GMDS-207ENST00000530459 ZNF233A6NK53 670 aa5.57□□□□□ -1.52
GMDS-207ENST00000530459 NEURL1BA8MQ27 555 aa5.57□□□□□ -1.52
GMDS-207ENST00000530459 LGALS16A8MUM7 142 aa5.57□□□□□ -1.52
GMDS-207ENST00000530459 RNF225M0QZC1 329 aaPredicted RBP5.57□□□□□ -1.52
GMDS-207ENST00000530459 CES2O00748 559 aa5.57□□□□□ -1.52
GMDS-207ENST00000530459 PJA2O43164 708 aa5.57□□□□□ -1.52
GMDS-207ENST00000530459 TACC1O75410 805 aa5.57□□□□□ -1.52
GMDS-207ENST00000530459 SMNDC1O75940 238 aaKnown RBP eCLIP5.57□□□□□ -1.52
GMDS-207ENST00000530459 FMNL1O95466 1100 aaPredicted RBP5.57□□□□□ -1.52
GMDS-207ENST00000530459 ATP6V1G2O95670 118 aa5.57□□□□□ -1.52
GMDS-207ENST00000530459 MMP1P03956 469 aa5.57□□□□□ -1.52
GMDS-207ENST00000530459 IGKV5-2P06315 115 aa5.57□□□□□ -1.52
GMDS-207ENST00000530459 MYBP10242 640 aa5.57□□□□□ -1.52
GMDS-207ENST00000530459 PDHBP11177 359 aa5.57□□□□□ -1.52
GMDS-207ENST00000530459 EEF1GP26641 437 aaKnown RBP5.57□□□□□ -1.52
GMDS-207ENST00000530459 GBP2P32456 591 aaPredicted RBP5.57□□□□□ -1.52
GMDS-207ENST00000530459 PAFAH1B1P43034 410 aa5.57□□□□□ -1.52
GMDS-207ENST00000530459 TOB1P50616 345 aaPredicted RBP5.57□□□□□ -1.52
GMDS-207ENST00000530459 ELF3P78545 371 aaPredicted RBP5.57□□□□□ -1.52
GMDS-207ENST00000530459 C2orf54Q08AI8 447 aa5.57□□□□□ -1.52
GMDS-207ENST00000530459 TFCP2Q12800 502 aa5.57□□□□□ -1.52
GMDS-207ENST00000530459 BLMHQ13867 455 aa5.57□□□□□ -1.52
GMDS-207ENST00000530459 TRIM29Q14134 588 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms