RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 NMT2O60551 498 aa24.64■■□□□ 1.54
TSPAN4-219ENST00000530404 SLC3A2P08195 630 aaKnown RBP24.64■■□□□ 1.54
TSPAN4-219ENST00000530404 SNAP25P60880 206 aa24.64■■□□□ 1.54
TSPAN4-219ENST00000530404 CNTN2Q02246 1040 aa24.64■■□□□ 1.54
TSPAN4-219ENST00000530404 IKQ13123 557 aaPredicted RBP24.64■■□□□ 1.54
TSPAN4-219ENST00000530404 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.64■■□□□ 1.545e-6■■■■■ 45.5
TSPAN4-219ENST00000530404 ARMCX2Q7L311 632 aa24.64■■□□□ 1.54
TSPAN4-219ENST00000530404 ZNF467Q7Z7K2 595 aaPredicted RBP24.64■■□□□ 1.54
TSPAN4-219ENST00000530404 CHST13Q8NET6 341 aa24.64■■□□□ 1.54
TSPAN4-219ENST00000530404 TSEN34Q9BSV6 310 aaKnown RBP24.64■■□□□ 1.54
TSPAN4-219ENST00000530404 SYNPO2Q9UMS6 1093 aa24.64■■□□□ 1.54
TSPAN4-219ENST00000530404 MTMR7Q9Y216 660 aa24.64■■□□□ 1.54
TSPAN4-219ENST00000530404 SALL3Q9BXA9 1300 aa24.63■■□□□ 1.53
TSPAN4-219ENST00000530404 RAG1P15918 1043 aa24.63■■□□□ 1.53
TSPAN4-219ENST00000530404 MCCP23508 829 aa24.63■■□□□ 1.53
TSPAN4-219ENST00000530404 STAT2P52630 851 aa24.63■■□□□ 1.53
TSPAN4-219ENST00000530404 FAAP100Q0VG06 881 aa24.63■■□□□ 1.53
TSPAN4-219ENST00000530404 CCDC144BQ3MJ40 725 aa24.63■■□□□ 1.53
TSPAN4-219ENST00000530404 CCSAPQ6IQ19 270 aaPredicted RBP24.63■■□□□ 1.53
TSPAN4-219ENST00000530404 AGBL1Q96MI9 1066 aa24.63■■□□□ 1.53
TSPAN4-219ENST00000530404 TMEM39AQ9NV64 488 aa24.63■■□□□ 1.53
TSPAN4-219ENST00000530404 FBXO40Q9UH90 709 aa24.63■■□□□ 1.53
TSPAN4-219ENST00000530404 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.63■■□□□ 1.53
TSPAN4-219ENST00000530404 TSPY2A6NKD2 308 aa24.62■■□□□ 1.53
TSPAN4-219ENST00000530404 KIAA0355O15063 1070 aa24.62■■□□□ 1.53
TSPAN4-219ENST00000530404 DUSP11O75319 330 aaKnown RBP24.62■■□□□ 1.53
TSPAN4-219ENST00000530404 C6orf222P0C671 652 aaPredicted RBP24.62■■□□□ 1.53
TSPAN4-219ENST00000530404 OAZ1P54368 228 aa24.62■■□□□ 1.53
TSPAN4-219ENST00000530404 VPS53Q5VIR6 699 aa24.62■■□□□ 1.53
TSPAN4-219ENST00000530404 KCTD1Q719H9 257 aa24.62■■□□□ 1.53
TSPAN4-219ENST00000530404 CCDC144CPQ8IYA2 1237 aa24.62■■□□□ 1.53
TSPAN4-219ENST00000530404 STX8Q9UNK0 236 aa24.62■■□□□ 1.53
TSPAN4-219ENST00000530404 MYO9BQ13459 2157 aa24.61■■□□□ 1.53
TSPAN4-219ENST00000530404 ZNF536O15090 1300 aa24.61■■□□□ 1.53
TSPAN4-219ENST00000530404 MOXD2PA6NHM9 499 aa24.61■■□□□ 1.53
TSPAN4-219ENST00000530404 SLC1A4P43007 532 aa24.61■■□□□ 1.53
TSPAN4-219ENST00000530404 ANKRD45Q5TZF3 282 aa24.61■■□□□ 1.53
TSPAN4-219ENST00000530404 CCDC174Q6PII3 467 aa24.61■■□□□ 1.53
TSPAN4-219ENST00000530404 NUP133Q8WUM0 1156 aa24.61■■□□□ 1.53
TSPAN4-219ENST00000530404 ABHD16BQ9H3Z7 469 aa24.61■■□□□ 1.53
TSPAN4-219ENST00000530404 ACAD9Q9H845 621 aa24.61■■□□□ 1.53
TSPAN4-219ENST00000530404 IL17RBQ9NRM6 502 aa24.61■■□□□ 1.53
TSPAN4-219ENST00000530404 RNF146Q9NTX7 359 aa24.61■■□□□ 1.53
TSPAN4-219ENST00000530404 DDX49Q9Y6V7 483 aaKnown RBP24.61■■□□□ 1.53
TSPAN4-219ENST00000530404 RRP1P56182 461 aaKnown RBP24.6■■□□□ 1.53
TSPAN4-219ENST00000530404 ANKRD33Q7Z3H0 272 aa24.6■■□□□ 1.53
TSPAN4-219ENST00000530404 FAM160B2Q86V87 743 aa24.6■■□□□ 1.53
TSPAN4-219ENST00000530404 STAG1Q8WVM7 1258 aa24.6■■□□□ 1.53
TSPAN4-219ENST00000530404 GMCL1Q96IK5 515 aa24.6■■□□□ 1.53
TSPAN4-219ENST00000530404 RNPC3Q96LT9 517 aaKnown RBP24.6■■□□□ 1.53
TSPAN4-219ENST00000530404 CRBNQ96SW2 442 aa24.6■■□□□ 1.53
TSPAN4-219ENST00000530404 KATNBL1Q9H079 304 aa24.6■■□□□ 1.53
TSPAN4-219ENST00000530404 A1CFQ9NQ94 594 aaKnown RBP24.6■■□□□ 1.53
TSPAN4-219ENST00000530404 MYH6P13533 1939 aa24.6■■□□□ 1.53
TSPAN4-219ENST00000530404 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.59■■□□□ 1.53
TSPAN4-219ENST00000530404 DCDC2CA8MYV0 355 aa24.59■■□□□ 1.53
TSPAN4-219ENST00000530404 ASGR1P07306 291 aa24.59■■□□□ 1.53
TSPAN4-219ENST00000530404 ALAS1P13196 640 aa24.59■■□□□ 1.53
TSPAN4-219ENST00000530404 CHURC1Q8WUH1 139 aa24.59■■□□□ 1.53
TSPAN4-219ENST00000530404 VTI1AQ96AJ9 217 aa24.59■■□□□ 1.53
TSPAN4-219ENST00000530404 CDX2Q99626 313 aaPredicted RBP24.59■■□□□ 1.53
TSPAN4-219ENST00000530404 TTYH1Q9H313 450 aaPredicted RBP24.59■■□□□ 1.53
TSPAN4-219ENST00000530404 SEMA6BQ9H3T3 888 aa24.59■■□□□ 1.53
TSPAN4-219ENST00000530404 SOWAHBA6NEL2 793 aa24.58■■□□□ 1.53
TSPAN4-219ENST00000530404 RANBP6O60518 1105 aaKnown RBP24.58■■□□□ 1.53
TSPAN4-219ENST00000530404 FDX1P10109 184 aa24.58■■□□□ 1.53
TSPAN4-219ENST00000530404 PTGS1P23219 599 aa24.58■■□□□ 1.53
TSPAN4-219ENST00000530404 CST5P28325 142 aaPredicted RBP24.58■■□□□ 1.53
TSPAN4-219ENST00000530404 GJA9P57773 515 aa24.58■■□□□ 1.53
TSPAN4-219ENST00000530404 SMAD3P84022 425 aaKnown RBP24.58■■□□□ 1.53
TSPAN4-219ENST00000530404 FPGSQ05932 587 aa24.58■■□□□ 1.53
TSPAN4-219ENST00000530404 FAM133AQ8N9E0 248 aa24.58■■□□□ 1.53
TSPAN4-219ENST00000530404 GLT1D1Q96MS3 346 aa24.58■■□□□ 1.53
TSPAN4-219ENST00000530404 TOX2Q96NM4 488 aa24.58■■□□□ 1.53
TSPAN4-219ENST00000530404 TRERF1Q96PN7 1200 aa24.58■■□□□ 1.53
TSPAN4-219ENST00000530404 UPF3AQ9H1J1 476 aaKnown RBP24.58■■□□□ 1.53
TSPAN4-219ENST00000530404 VCANP13611 3396 aa24.58■■□□□ 1.53
TSPAN4-219ENST00000530404 BEX3Q00994 111 aa24.57■■□□□ 1.52
TSPAN4-219ENST00000530404 MUM1L1Q5H9M0 696 aa24.57■■□□□ 1.52
TSPAN4-219ENST00000530404 SPC25Q9HBM1 224 aa24.57■■□□□ 1.52
TSPAN4-219ENST00000530404 ZBTB47Q9UFB7 747 aaPredicted RBP24.57■■□□□ 1.52
TSPAN4-219ENST00000530404 PRR12Q9ULL5 1215 aa24.57■■□□□ 1.52
TSPAN4-219ENST00000530404 LAMA4Q16363 1823 aa24.56■■□□□ 1.52
TSPAN4-219ENST00000530404 GNASQ5JWF2 1037 aa24.56■■□□□ 1.52
TSPAN4-219ENST00000530404 RCSD1Q6JBY9 416 aa24.56■■□□□ 1.52
TSPAN4-219ENST00000530404 PCSK9Q8NBP7 692 aaKnown RBP24.56■■□□□ 1.52
TSPAN4-219ENST00000530404 MYLIPQ8WY64 445 aa24.56■■□□□ 1.52
TSPAN4-219ENST00000530404 ASTN1O14525 1302 aa24.56■■□□□ 1.52
TSPAN4-219ENST00000530404 CTAGE5O15320 804 aa24.55■■□□□ 1.52
TSPAN4-219ENST00000530404 CCDC96Q2M329 555 aa24.55■■□□□ 1.52
TSPAN4-219ENST00000530404 NOL8Q76FK4 1167 aaKnown RBP24.55■■□□□ 1.52
TSPAN4-219ENST00000530404 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.55■■□□□ 1.521e-6■■■■□ 22.2
TSPAN4-219ENST00000530404 EVI5LQ96CN4 794 aa24.55■■□□□ 1.52
TSPAN4-219ENST00000530404 FAM227BQ96M60 508 aa24.55■■□□□ 1.52
TSPAN4-219ENST00000530404 PURBQ96QR8 312 aaKnown RBP24.55■■□□□ 1.52
TSPAN4-219ENST00000530404 TOMM22Q9NS69 142 aa24.55■■□□□ 1.52
TSPAN4-219ENST00000530404 TBX21Q9UL17 535 aa24.55■■□□□ 1.52
TSPAN4-219ENST00000530404 ELP1O95163 1332 aa24.55■■□□□ 1.52
TSPAN4-219ENST00000530404 A0A0D9SFI3 127 aa24.54■■□□□ 1.52
TSPAN4-219ENST00000530404 TIMP1P01033 207 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms