RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 CRKLP46109 303 aaKnown RBP11.28□□□□□ -0.6
CCDC90B-217ENST00000530253 ZNF211Q13398 564 aaPredicted RBP11.28□□□□□ -0.6
CCDC90B-217ENST00000530253 MYH16Q9H6N6 1097 aa11.28□□□□□ -0.6
CCDC90B-217ENST00000530253 SPON1Q9HCB6 807 aa11.28□□□□□ -0.6
CCDC90B-217ENST00000530253 SLC5A6Q9Y289 635 aa11.28□□□□□ -0.6
CCDC90B-217ENST00000530253 ZBTB1Q9Y2K1 713 aa11.28□□□□□ -0.6
CCDC90B-217ENST00000530253 C4AP0C0L4 1744 aa11.27□□□□□ -0.61
CCDC90B-217ENST00000530253 PTPN12Q05209 780 aaKnown RBP11.27□□□□□ -0.61
CCDC90B-217ENST00000530253 PDE3AQ14432 1141 aa11.27□□□□□ -0.61
CCDC90B-217ENST00000530253 CYP27C1Q4G0S4 372 aa11.27□□□□□ -0.61
CCDC90B-217ENST00000530253 LRP10Q7Z4F1 713 aa11.27□□□□□ -0.61
CCDC90B-217ENST00000530253 TSPYL6Q8N831 410 aa11.27□□□□□ -0.61
CCDC90B-217ENST00000530253 MISP3Q96FF7 219 aa11.27□□□□□ -0.61
CCDC90B-217ENST00000530253 TRIM56Q9BRZ2 755 aaKnown RBP11.27□□□□□ -0.61
CCDC90B-217ENST00000530253 TEX13AQ9BXU3 409 aaPredicted RBP11.27□□□□□ -0.61
CCDC90B-217ENST00000530253 ZNF576Q9H609 170 aa11.27□□□□□ -0.61
CCDC90B-217ENST00000530253 SOS1Q07889 1333 aaPredicted RBP11.27□□□□□ -0.61
CCDC90B-217ENST00000530253 PNPLA7Q6ZV29 1317 aa11.27□□□□□ -0.61
CCDC90B-217ENST00000530253 BIN1O00499 593 aa11.26□□□□□ -0.61
CCDC90B-217ENST00000530253 CTSBP07858 339 aa11.26□□□□□ -0.61
CCDC90B-217ENST00000530253 ITPKAP23677 461 aa11.26□□□□□ -0.61
CCDC90B-217ENST00000530253 EXOSC9Q06265 439 aaKnown RBP11.26□□□□□ -0.61
CCDC90B-217ENST00000530253 PHLDB3Q6NSJ2 640 aa11.26□□□□□ -0.61
CCDC90B-217ENST00000530253 OGFOD3Q6PK18 319 aa11.26□□□□□ -0.61
CCDC90B-217ENST00000530253 SMIM5Q71RC9 77 aa11.26□□□□□ -0.61
CCDC90B-217ENST00000530253 CCDC82Q8N4S0 544 aa11.26□□□□□ -0.61
CCDC90B-217ENST00000530253 EHD4Q9H223 541 aa11.26□□□□□ -0.61
CCDC90B-217ENST00000530253 DAGLAQ9Y4D2 1042 aa11.26□□□□□ -0.61
CCDC90B-217ENST00000530253 SCN7AQ01118 1682 aa11.25□□□□□ -0.61
CCDC90B-217ENST00000530253 AOC2O75106 756 aa11.25□□□□□ -0.61
CCDC90B-217ENST00000530253 RPS6KA4O75676 772 aa11.25□□□□□ -0.61
CCDC90B-217ENST00000530253 STARD3NLO95772 234 aa11.25□□□□□ -0.61
CCDC90B-217ENST00000530253 A1BGP04217 495 aa11.25□□□□□ -0.61
CCDC90B-217ENST00000530253 ANO2Q9NQ90 1003 aa11.25□□□□□ -0.61
CCDC90B-217ENST00000530253 PPP1R1BQ9UD71 204 aaPredicted RBP11.25□□□□□ -0.61
CCDC90B-217ENST00000530253 GOLGB1Q14789 3259 aaKnown RBP11.25□□□□□ -0.61
CCDC90B-217ENST00000530253 ELL2O00472 640 aaPredicted RBP11.24□□□□□ -0.61
CCDC90B-217ENST00000530253 NDUFB5O43674 189 aa11.24□□□□□ -0.61
CCDC90B-217ENST00000530253 VAMP4O75379 141 aa11.24□□□□□ -0.61
CCDC90B-217ENST00000530253 HMGB2P26583 209 aaKnown RBP11.24□□□□□ -0.61
CCDC90B-217ENST00000530253 PIP4K2AP48426 406 aaPredicted RBP11.24□□□□□ -0.61
CCDC90B-217ENST00000530253 EIF5P55010 431 aaKnown RBP11.24□□□□□ -0.61
CCDC90B-217ENST00000530253 PROSER3Q2NL68 480 aa11.24□□□□□ -0.61
CCDC90B-217ENST00000530253 TWISTNBQ3B726 338 aaPredicted RBP11.24□□□□□ -0.61
CCDC90B-217ENST00000530253 SEZ6L2Q6UXD5 910 aa11.24□□□□□ -0.61
CCDC90B-217ENST00000530253 C1GALT1Q9NS00 363 aa11.24□□□□□ -0.61
CCDC90B-217ENST00000530253 COL15A1P39059 1388 aa11.24□□□□□ -0.61
CCDC90B-217ENST00000530253 ARID1BQ8NFD5 2236 aaPredicted RBP11.24□□□□□ -0.61
CCDC90B-217ENST00000530253 COL24A1Q17RW2 1714 aa11.23□□□□□ -0.61
CCDC90B-217ENST00000530253 BCORQ6W2J9 1755 aa11.23□□□□□ -0.61
CCDC90B-217ENST00000530253 ICMTO60725 284 aa11.23□□□□□ -0.61
CCDC90B-217ENST00000530253 IL6STP40189 918 aaPredicted RBP11.23□□□□□ -0.61
CCDC90B-217ENST00000530253 COL23A1Q86Y22 540 aaPredicted RBP11.23□□□□□ -0.61
CCDC90B-217ENST00000530253 TFCP2L1Q9NZI6 479 aa11.23□□□□□ -0.61
CCDC90B-217ENST00000530253 UTRNP46939 3433 aa11.23□□□□□ -0.61
CCDC90B-217ENST00000530253 CPNE3O75131 537 aaKnown RBP11.22□□□□□ -0.61
CCDC90B-217ENST00000530253 EIF2S2P20042 333 aaKnown RBP11.22□□□□□ -0.61
CCDC90B-217ENST00000530253 CANXP27824 592 aaKnown RBP11.22□□□□□ -0.61
CCDC90B-217ENST00000530253 PLCL1Q15111 1095 aa11.22□□□□□ -0.61
CCDC90B-217ENST00000530253 RPS26P11Q5JNZ5 115 aaPredicted RBP11.22□□□□□ -0.61
CCDC90B-217ENST00000530253 GLYCTKQ8IVS8 523 aa11.22□□□□□ -0.61
CCDC90B-217ENST00000530253 BCL7CQ8WUZ0 217 aaPredicted RBP11.22□□□□□ -0.61
CCDC90B-217ENST00000530253 WDR18Q9BV38 432 aa11.22□□□□□ -0.61
CCDC90B-217ENST00000530253 USP42Q9H9J4 1324 aaKnown RBP11.21□□□□□ -0.61
CCDC90B-217ENST00000530253 ANXA1P04083 346 aa11.21□□□□□ -0.61
CCDC90B-217ENST00000530253 JAG1P78504 1218 aa11.21□□□□□ -0.61
CCDC90B-217ENST00000530253 COL19A1Q14993 1142 aa11.21□□□□□ -0.61
CCDC90B-217ENST00000530253 MTFR1LQ9H019 292 aa11.21□□□□□ -0.61
CCDC90B-217ENST00000530253 ATXN3LQ9H3M9 355 aa11.21□□□□□ -0.61
CCDC90B-217ENST00000530253 PIDD1Q9HB75 910 aa11.21□□□□□ -0.61
CCDC90B-217ENST00000530253 DDX21Q9NR30 783 aaKnown RBP eCLIP11.21□□□□□ -0.61
CCDC90B-217ENST00000530253 CHPF2Q9P2E5 772 aa11.21□□□□□ -0.61
CCDC90B-217ENST00000530253 C8AP07357 584 aa11.2□□□□□ -0.62
CCDC90B-217ENST00000530253 SLFN14P0C7P3 912 aa11.2□□□□□ -0.62
CCDC90B-217ENST00000530253 FLAD1Q8NFF5 587 aa11.2□□□□□ -0.62
CCDC90B-217ENST00000530253 YTHDC1Q96MU7 727 aaKnown RBP11.2□□□□□ -0.62
CCDC90B-217ENST00000530253 CITED4Q96RK1 184 aa11.2□□□□□ -0.62
CCDC90B-217ENST00000530253 H3BRB1 525 aa11.19□□□□□ -0.62
CCDC90B-217ENST00000530253 CAMTA2O94983 1202 aa11.19□□□□□ -0.62
CCDC90B-217ENST00000530253 ECEL1O95672 775 aa11.19□□□□□ -0.62
CCDC90B-217ENST00000530253 MYL6BP14649 208 aa11.19□□□□□ -0.62
CCDC90B-217ENST00000530253 CCDC30Q5VVM6 783 aa11.19□□□□□ -0.62
CCDC90B-217ENST00000530253 PRPF40BQ6NWY9 871 aaKnown RBP11.19□□□□□ -0.62
CCDC90B-217ENST00000530253 TUT1Q9H6E5 874 aaKnown RBP11.19□□□□□ -0.62
CCDC90B-217ENST00000530253 NPHS2Q9NP85 383 aa11.19□□□□□ -0.62
CCDC90B-217ENST00000530253 DBF4Q9UBU7 674 aaPredicted RBP11.19□□□□□ -0.62
CCDC90B-217ENST00000530253 SRP68Q9UHB9 627 aaKnown RBP11.19□□□□□ -0.62
CCDC90B-217ENST00000530253 USTQ9Y2C2 406 aa11.19□□□□□ -0.62
CCDC90B-217ENST00000530253 TCERG1O14776 1098 aaKnown RBP11.18□□□□□ -0.62
CCDC90B-217ENST00000530253 CT47B1P0C2W7 299 aaPredicted RBP11.18□□□□□ -0.62
CCDC90B-217ENST00000530253 GYS1P13807 737 aa11.18□□□□□ -0.62
CCDC90B-217ENST00000530253 USPL1Q5W0Q7 1092 aa11.18□□□□□ -0.62
CCDC90B-217ENST00000530253 TTLL7Q6ZT98 887 aa11.18□□□□□ -0.62
CCDC90B-217ENST00000530253 DNAJC25Q9H1X3 360 aa11.18□□□□□ -0.62
CCDC90B-217ENST00000530253 NARFQ9UHQ1 456 aa11.18□□□□□ -0.62
CCDC90B-217ENST00000530253 A0A087WZG4 1122 aa11.17□□□□□ -0.62
CCDC90B-217ENST00000530253 DYNC1LI2O43237 492 aaPredicted RBP11.17□□□□□ -0.62
CCDC90B-217ENST00000530253 G2E3Q7L622 706 aa11.17□□□□□ -0.62
CCDC90B-217ENST00000530253 NETO1Q8TDF5 533 aa11.17□□□□□ -0.62
CCDC90B-217ENST00000530253 XAGE3Q8WTP9 111 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms