RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 NOGQ13253 232 aa16.58■□□□□ 0.24
TTC39A-216ENST00000530004 ATL3Q6DD88 541 aa16.58■□□□□ 0.24
TTC39A-216ENST00000530004 GPAT2Q6NUI2 795 aa16.58■□□□□ 0.24
TTC39A-216ENST00000530004 LEO1Q8WVC0 666 aaPredicted RBP16.58■□□□□ 0.24
TTC39A-216ENST00000530004 ISY1Q9ULR0 285 aaKnown RBP16.58■□□□□ 0.24
TTC39A-216ENST00000530004 AGTPBP1Q9UPW5 1226 aa16.58■□□□□ 0.24
TTC39A-216ENST00000530004 ELP1O95163 1332 aa16.58■□□□□ 0.24
TTC39A-216ENST00000530004 CYTH3O43739 400 aa16.57■□□□□ 0.24
TTC39A-216ENST00000530004 SCG2P13521 617 aa16.57■□□□□ 0.24
TTC39A-216ENST00000530004 UBE2HP62256 183 aa16.57■□□□□ 0.24
TTC39A-216ENST00000530004 CEBPZQ03701 1054 aaKnown RBP16.57■□□□□ 0.24
TTC39A-216ENST00000530004 PFKFB3Q16875 520 aaPredicted RBP16.57■□□□□ 0.24
TTC39A-216ENST00000530004 SLC35G1Q2M3R5 365 aa16.57■□□□□ 0.24
TTC39A-216ENST00000530004 MYSM1Q5VVJ2 828 aa16.57■□□□□ 0.24
TTC39A-216ENST00000530004 DIS3L2Q8IYB7 885 aaKnown RBP16.57■□□□□ 0.24
TTC39A-216ENST00000530004 SHISA4Q96DD7 197 aa16.57■□□□□ 0.24
TTC39A-216ENST00000530004 USP28Q96RU2 1077 aa16.57■□□□□ 0.24
TTC39A-216ENST00000530004 ZIC5Q96T25 663 aa16.57■□□□□ 0.24
TTC39A-216ENST00000530004 FTOQ9C0B1 505 aaKnown RBP eCLIP16.57■□□□□ 0.24
TTC39A-216ENST00000530004 GPCPD1Q9NPB8 672 aa16.57■□□□□ 0.24
TTC39A-216ENST00000530004 MYH6P13533 1939 aa16.57■□□□□ 0.24
TTC39A-216ENST00000530004 MYH15Q9Y2K3 1946 aa16.57■□□□□ 0.24
TTC39A-216ENST00000530004 PTPRFP10586 1907 aa16.57■□□□□ 0.24
TTC39A-216ENST00000530004 USP17L15C9J2P7 530 aa16.56■□□□□ 0.24
TTC39A-216ENST00000530004 USP17L13C9JLJ4 530 aa16.56■□□□□ 0.24
TTC39A-216ENST00000530004 TMEM232C9JQI7 657 aa16.56■□□□□ 0.24
TTC39A-216ENST00000530004 USP17L11C9JVI0 530 aa16.56■□□□□ 0.24
TTC39A-216ENST00000530004 USP17L18D6R9N7 530 aa16.56■□□□□ 0.24
TTC39A-216ENST00000530004 USP17L22D6RA61 530 aa16.56■□□□□ 0.24
TTC39A-216ENST00000530004 USP17L17D6RBQ6 530 aa16.56■□□□□ 0.24
TTC39A-216ENST00000530004 USP17L19D6RCP7 530 aa16.56■□□□□ 0.24
TTC39A-216ENST00000530004 USP17L20D6RJB6 530 aa16.56■□□□□ 0.24
TTC39A-216ENST00000530004 U2AF2P26368 475 aaKnown RBP eCLIP16.56■□□□□ 0.24
TTC39A-216ENST00000530004 HOXA7P31268 230 aaPredicted RBP16.56■□□□□ 0.24
TTC39A-216ENST00000530004 INHBEP58166 350 aa16.56■□□□□ 0.24
TTC39A-216ENST00000530004 USP17L24Q0WX57 530 aa16.56■□□□□ 0.24
TTC39A-216ENST00000530004 TTBK2Q6IQ55 1244 aa16.56■□□□□ 0.24
TTC39A-216ENST00000530004 CATSPERGQ6ZRH7 1159 aa16.56■□□□□ 0.24
TTC39A-216ENST00000530004 PTPN18Q99952 460 aa16.56■□□□□ 0.24
TTC39A-216ENST00000530004 TANGO6Q9C0B7 1094 aa16.56■□□□□ 0.24
TTC39A-216ENST00000530004 BTBD18B2RXH4 712 aa16.56■□□□□ 0.24
TTC39A-216ENST00000530004 BTBD19C9JJ37 291 aa16.56■□□□□ 0.24
TTC39A-216ENST00000530004 PLA2G6O60733 806 aa16.56■□□□□ 0.24
TTC39A-216ENST00000530004 STAT2P52630 851 aa16.56■□□□□ 0.24
TTC39A-216ENST00000530004 TPRNQ4KMQ1 711 aa16.56■□□□□ 0.24
TTC39A-216ENST00000530004 ANKRD23Q86SG2 305 aa16.56■□□□□ 0.24
TTC39A-216ENST00000530004 PHF20Q9BVI0 1012 aa16.56■□□□□ 0.24
TTC39A-216ENST00000530004 SPZ1Q9BXG8 430 aa16.56■□□□□ 0.24
TTC39A-216ENST00000530004 CPVLQ9H3G5 476 aa16.56■□□□□ 0.24
TTC39A-216ENST00000530004 FEM1BQ9UK73 627 aa16.56■□□□□ 0.24
TTC39A-216ENST00000530004 AOC2O75106 756 aa16.55■□□□□ 0.24
TTC39A-216ENST00000530004 VEGFBP49765 207 aa16.55■□□□□ 0.24
TTC39A-216ENST00000530004 SREBF2Q12772 1141 aa16.55■□□□□ 0.24
TTC39A-216ENST00000530004 CAVIN1Q6NZI2 390 aaKnown RBP16.55■□□□□ 0.24
TTC39A-216ENST00000530004 BTNL9Q6UXG8 535 aa16.55■□□□□ 0.24
TTC39A-216ENST00000530004 FAM43AQ8N2R8 423 aa16.55■□□□□ 0.24
TTC39A-216ENST00000530004 UBA5Q9GZZ9 404 aa16.55■□□□□ 0.24
TTC39A-216ENST00000530004 FOXP1Q9H334 677 aaPredicted RBP16.55■□□□□ 0.24
TTC39A-216ENST00000530004 FBXO28Q9NVF7 368 aa16.55■□□□□ 0.24
TTC39A-216ENST00000530004 LOC285556D6RIA3 1793 aa16.55■□□□□ 0.24
TTC39A-216ENST00000530004 FLOT1O75955 427 aa16.54■□□□□ 0.24
TTC39A-216ENST00000530004 SMARCA1P28370 1054 aa16.54■□□□□ 0.24
TTC39A-216ENST00000530004 SLC16A2P36021 539 aa16.54■□□□□ 0.24
TTC39A-216ENST00000530004 IKQ13123 557 aaPredicted RBP16.54■□□□□ 0.24
TTC39A-216ENST00000530004 PABPC4Q13310 644 aaKnown RBP eCLIP16.54■□□□□ 0.24
TTC39A-216ENST00000530004 FAM160B2Q86V87 743 aa16.54■□□□□ 0.24
TTC39A-216ENST00000530004 NOSTRINQ8IVI9 506 aa16.54■□□□□ 0.24
TTC39A-216ENST00000530004 CHURC1Q8WUH1 139 aa16.54■□□□□ 0.24
TTC39A-216ENST00000530004 RCOR1Q9UKL0 485 aa16.54■□□□□ 0.24
TTC39A-216ENST00000530004 SLC45A1Q9Y2W3 748 aa16.54■□□□□ 0.24
TTC39A-216ENST00000530004 PDHXO00330 501 aa16.54■□□□□ 0.24
TTC39A-216ENST00000530004 IGF2BP3O00425 579 aaKnown RBP eCLIP16.54■□□□□ 0.24
TTC39A-216ENST00000530004 KRT2P35908 639 aa16.54■□□□□ 0.24
TTC39A-216ENST00000530004 TM4SF4P48230 202 aa16.54■□□□□ 0.24
TTC39A-216ENST00000530004 NR5A1Q13285 461 aa16.54■□□□□ 0.24
TTC39A-216ENST00000530004 GSE1Q14687 1217 aa16.54■□□□□ 0.24
TTC39A-216ENST00000530004 COG2Q14746 738 aa16.54■□□□□ 0.24
TTC39A-216ENST00000530004 OXER1Q8TDS5 423 aa16.54■□□□□ 0.24
TTC39A-216ENST00000530004 GPKOWQ92917 476 aaPredicted RBP eCLIP16.54■□□□□ 0.24
TTC39A-216ENST00000530004 SLF1Q9BQI6 1058 aa16.54■□□□□ 0.24
TTC39A-216ENST00000530004 ASCC2Q9H1I8 757 aaPredicted RBP16.54■□□□□ 0.24
TTC39A-216ENST00000530004 RTEL1Q9NZ71 1219 aa16.54■□□□□ 0.24
TTC39A-216ENST00000530004 CLIC4Q9Y696 253 aa16.54■□□□□ 0.24
TTC39A-216ENST00000530004 IRX3P78415 501 aaPredicted RBP16.53■□□□□ 0.24
TTC39A-216ENST00000530004 SYDE2Q5VT97 1194 aa16.53■□□□□ 0.24
TTC39A-216ENST00000530004 IFNL1Q8IU54 200 aa16.53■□□□□ 0.24
TTC39A-216ENST00000530004 PRPF38AQ8NAV1 312 aaKnown RBP16.53■□□□□ 0.24
TTC39A-216ENST00000530004 KIFC2Q96AC6 838 aa16.53■□□□□ 0.24
TTC39A-216ENST00000530004 RRP36Q96EU6 259 aaKnown RBP16.53■□□□□ 0.24
TTC39A-216ENST00000530004 RIOX1Q9H6W3 641 aa16.53■□□□□ 0.24
TTC39A-216ENST00000530004 VAT1LQ9HCJ6 419 aa16.53■□□□□ 0.24
TTC39A-216ENST00000530004 BRMS1Q9HCU9 246 aa16.53■□□□□ 0.24
TTC39A-216ENST00000530004 PPP1R9AQ9ULJ8 1098 aa16.53■□□□□ 0.24
TTC39A-216ENST00000530004 GOLGA6L4A6NEF3 574 aa16.52■□□□□ 0.24
TTC39A-216ENST00000530004 OSBPP22059 807 aa16.52■□□□□ 0.24
TTC39A-216ENST00000530004 DSG3P32926 999 aa16.52■□□□□ 0.24
TTC39A-216ENST00000530004 MAP2K2P36507 400 aa16.52■□□□□ 0.24
TTC39A-216ENST00000530004 NLRP5P59047 1200 aa16.52■□□□□ 0.24
TTC39A-216ENST00000530004 SAMD1Q6SPF0 538 aaPredicted RBP16.52■□□□□ 0.24
TTC39A-216ENST00000530004 HEATR3Q7Z4Q2 680 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms