RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 FAM126BQ8IXS8 530 aa19.21■□□□□ 0.67
COL16A1-216ENST00000529928 KIFC2Q96AC6 838 aa19.21■□□□□ 0.67
COL16A1-216ENST00000529928 STRBPQ96SI9 672 aaKnown RBP19.21■□□□□ 0.67
COL16A1-216ENST00000529928 CHMP4BQ9H444 224 aaKnown RBP19.21■□□□□ 0.67
COL16A1-216ENST00000529928 RAVER2Q9HCJ3 691 aaKnown RBP19.21■□□□□ 0.67
COL16A1-216ENST00000529928 CLIP2Q9UDT6 1046 aa19.21■□□□□ 0.67
COL16A1-216ENST00000529928 SYNPO2Q9UMS6 1093 aa19.21■□□□□ 0.67
COL16A1-216ENST00000529928 GSG1L2A8MUP6 293 aa19.2■□□□□ 0.66
COL16A1-216ENST00000529928 MINDY4BA8MYZ0 360 aa19.2■□□□□ 0.66
COL16A1-216ENST00000529928 PBX2P40425 430 aa19.2■□□□□ 0.66
COL16A1-216ENST00000529928 ZNF365Q70YC5 407 aa19.2■□□□□ 0.66
COL16A1-216ENST00000529928 STK11IPQ8N1F8 1099 aa19.2■□□□□ 0.66
COL16A1-216ENST00000529928 ATXN2LQ8WWM7 1075 aaKnown RBP19.2■□□□□ 0.66
COL16A1-216ENST00000529928 FGD4Q96M96 766 aa19.2■□□□□ 0.66
COL16A1-216ENST00000529928 PPP1R12CQ9BZL4 782 aa19.2■□□□□ 0.66
COL16A1-216ENST00000529928 ZNF287Q9HBT7 754 aa19.2■□□□□ 0.66
COL16A1-216ENST00000529928 FEM1BQ9UK73 627 aa19.2■□□□□ 0.66
COL16A1-216ENST00000529928 TTC28Q96AY4 2481 aa19.2■□□□□ 0.66
COL16A1-216ENST00000529928 GRXCR1A8MXD5 290 aa19.19■□□□□ 0.66
COL16A1-216ENST00000529928 ACRP10323 421 aa19.19■□□□□ 0.66
COL16A1-216ENST00000529928 NKX3-2P78367 333 aa19.19■□□□□ 0.66
COL16A1-216ENST00000529928 RAB30Q15771 203 aa19.19■□□□□ 0.66
COL16A1-216ENST00000529928 CCDC144CPQ8IYA2 1237 aa19.19■□□□□ 0.66
COL16A1-216ENST00000529928 MKL1Q969V6 931 aa19.19■□□□□ 0.66
COL16A1-216ENST00000529928 LRRCC1Q9C099 1032 aa19.19■□□□□ 0.66
COL16A1-216ENST00000529928 MTIF3Q9H2K0 278 aaKnown RBP19.19■□□□□ 0.66
COL16A1-216ENST00000529928 PRDM12Q9H4Q4 367 aa19.19■□□□□ 0.66
COL16A1-216ENST00000529928 COG6Q9Y2V7 657 aa19.19■□□□□ 0.66
COL16A1-216ENST00000529928 IGKV6D-41A0A0C4DH26 115 aa19.18■□□□□ 0.66
COL16A1-216ENST00000529928 FDX1P10109 184 aa19.18■□□□□ 0.66
COL16A1-216ENST00000529928 ZNF444Q8N0Y2 327 aaPredicted RBP19.18■□□□□ 0.66
COL16A1-216ENST00000529928 PPM1EQ8WY54 764 aa19.18■□□□□ 0.66
COL16A1-216ENST00000529928 KATNBL1Q9H079 304 aa19.18■□□□□ 0.66
COL16A1-216ENST00000529928 IL23AQ9NPF7 189 aa19.18■□□□□ 0.66
COL16A1-216ENST00000529928 THEGQ9P2T0 379 aa19.18■□□□□ 0.66
COL16A1-216ENST00000529928 MSRAQ9UJ68 235 aa19.18■□□□□ 0.66
COL16A1-216ENST00000529928 CTAGE5O15320 804 aa19.17■□□□□ 0.66
COL16A1-216ENST00000529928 TTLL1O95922 423 aa19.17■□□□□ 0.66
COL16A1-216ENST00000529928 CD4P01730 458 aa19.17■□□□□ 0.66
COL16A1-216ENST00000529928 GMCL1P1Q8NEA9 526 aa19.17■□□□□ 0.66
COL16A1-216ENST00000529928 HERVK_113Q902F9 699 aa19.17■□□□□ 0.66
COL16A1-216ENST00000529928 CEP95Q96GE4 821 aa19.17■□□□□ 0.66
COL16A1-216ENST00000529928 MTMR4Q9NYA4 1195 aa19.17■□□□□ 0.66
COL16A1-216ENST00000529928 MYH4Q9Y623 1939 aa19.17■□□□□ 0.66
COL16A1-216ENST00000529928 MCM3APO60318 1980 aa19.17■□□□□ 0.66
COL16A1-216ENST00000529928 CABYRO75952 493 aa19.16■□□□□ 0.66
COL16A1-216ENST00000529928 CYP2C18P33260 490 aa19.16■□□□□ 0.66
COL16A1-216ENST00000529928 TNFAIP2Q03169 654 aa19.16■□□□□ 0.66
COL16A1-216ENST00000529928 KBTBD3Q8NAB2 608 aa19.16■□□□□ 0.66
COL16A1-216ENST00000529928 SLC43A3Q8NBI5 491 aa19.16■□□□□ 0.66
COL16A1-216ENST00000529928 APPBP2Q92624 585 aa19.16■□□□□ 0.66
COL16A1-216ENST00000529928 ASB2Q96Q27 587 aa19.16■□□□□ 0.66
COL16A1-216ENST00000529928 SEZ6LQ9BYH1 1024 aa19.16■□□□□ 0.66
COL16A1-216ENST00000529928 ACAD9Q9H845 621 aa19.16■□□□□ 0.66
COL16A1-216ENST00000529928 HOMER2Q9NSB8 354 aa19.16■□□□□ 0.66
COL16A1-216ENST00000529928 ECHDC1Q9NTX5 307 aa19.16■□□□□ 0.66
COL16A1-216ENST00000529928 MUC3AQ02505 3323 aa19.15■□□□□ 0.66
COL16A1-216ENST00000529928 FGBP02675 491 aa19.15■□□□□ 0.66
COL16A1-216ENST00000529928 BMP3P12645 472 aa19.15■□□□□ 0.66
COL16A1-216ENST00000529928 GNAT2P19087 354 aa19.15■□□□□ 0.66
COL16A1-216ENST00000529928 COL9A1P20849 921 aa19.15■□□□□ 0.66
COL16A1-216ENST00000529928 TDO2P48775 406 aa19.15■□□□□ 0.66
COL16A1-216ENST00000529928 BEX3Q00994 111 aa19.15■□□□□ 0.66
COL16A1-216ENST00000529928 CNTN2Q02246 1040 aa19.15■□□□□ 0.66
COL16A1-216ENST00000529928 NOL8Q76FK4 1167 aaKnown RBP19.15■□□□□ 0.66
COL16A1-216ENST00000529928 LRRC47Q8N1G4 583 aaKnown RBP19.15■□□□□ 0.66
COL16A1-216ENST00000529928 FAM133AQ8N9E0 248 aa19.15■□□□□ 0.66
COL16A1-216ENST00000529928 OSBP2Q969R2 916 aa19.15■□□□□ 0.66
COL16A1-216ENST00000529928 HIPK3Q9H422 1215 aa19.15■□□□□ 0.66
COL16A1-216ENST00000529928 SLC28A3Q9HAS3 691 aa19.15■□□□□ 0.66
COL16A1-216ENST00000529928 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.14■□□□□ 0.65
COL16A1-216ENST00000529928 ASB14A6NK59 587 aa19.14■□□□□ 0.65
COL16A1-216ENST00000529928 GPAA1O43292 621 aa19.14■□□□□ 0.65
COL16A1-216ENST00000529928 PRDM1O75626 825 aa19.14■□□□□ 0.65
COL16A1-216ENST00000529928 STAT2P52630 851 aa19.14■□□□□ 0.65
COL16A1-216ENST00000529928 MRPS5P82675 430 aaKnown RBP19.14■□□□□ 0.65
COL16A1-216ENST00000529928 SLFN13Q68D06 897 aa19.14■□□□□ 0.65
COL16A1-216ENST00000529928 CXCL17Q6UXB2 119 aa19.14■□□□□ 0.65
COL16A1-216ENST00000529928 TLK2Q86UE8 772 aa19.14■□□□□ 0.65
COL16A1-216ENST00000529928 EPB41L4AQ9HCS5 686 aaPredicted RBP19.14■□□□□ 0.65
COL16A1-216ENST00000529928 CXXC1Q9P0U4 656 aaPredicted RBP19.14■□□□□ 0.65
COL16A1-216ENST00000529928 TMEM232C9JQI7 657 aa19.13■□□□□ 0.65
COL16A1-216ENST00000529928 RNF113AO15541 343 aaKnown RBP19.13■□□□□ 0.65
COL16A1-216ENST00000529928 APPP05067 770 aa19.13■□□□□ 0.65
COL16A1-216ENST00000529928 ZFYP08048 801 aaPredicted RBP19.13■□□□□ 0.65
COL16A1-216ENST00000529928 IGFBP4P22692 258 aa19.13■□□□□ 0.65
COL16A1-216ENST00000529928 ITGA7Q13683 1181 aa19.13■□□□□ 0.65
COL16A1-216ENST00000529928 ADGRE1Q14246 886 aa19.13■□□□□ 0.65
COL16A1-216ENST00000529928 FSCN1Q16658 493 aaKnown RBP19.13■□□□□ 0.65
COL16A1-216ENST00000529928 FAM160B2Q86V87 743 aa19.13■□□□□ 0.65
COL16A1-216ENST00000529928 ADAMTS19Q8TE59 1207 aa19.13■□□□□ 0.65
COL16A1-216ENST00000529928 CHURC1Q8WUH1 139 aa19.13■□□□□ 0.65
COL16A1-216ENST00000529928 AP5M1Q9H0R1 490 aa19.13■□□□□ 0.65
COL16A1-216ENST00000529928 NKX2-4Q9H2Z4 354 aa19.13■□□□□ 0.65
COL16A1-216ENST00000529928 A1CFQ9NQ94 594 aaKnown RBP19.13■□□□□ 0.65
COL16A1-216ENST00000529928 RNF146Q9NTX7 359 aa19.13■□□□□ 0.65
COL16A1-216ENST00000529928 ISY1Q9ULR0 285 aaKnown RBP19.13■□□□□ 0.65
COL16A1-216ENST00000529928 GNEQ9Y223 722 aaKnown RBP19.13■□□□□ 0.65
COL16A1-216ENST00000529928 ASTN1O14525 1302 aa19.13■□□□□ 0.65
COL16A1-216ENST00000529928 PLIN4Q96Q06 1357 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms