RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 KCTD1Q719H9 257 aa18.18■□□□□ 0.5
CCDC90B-215ENST00000529745 MSL3Q8N5Y2 521 aaKnown RBP18.18■□□□□ 0.5
CCDC90B-215ENST00000529745 LRCH3Q96II8 777 aa18.18■□□□□ 0.5
CCDC90B-215ENST00000529745 RAVER2Q9HCJ3 691 aaKnown RBP18.18■□□□□ 0.5
CCDC90B-215ENST00000529745 ZSWIM5Q9P217 1185 aa18.18■□□□□ 0.5
CCDC90B-215ENST00000529745 PRR12Q9ULL5 1215 aa18.18■□□□□ 0.5
CCDC90B-215ENST00000529745 CTDP1Q9Y5B0 961 aaPredicted RBP18.18■□□□□ 0.5
CCDC90B-215ENST00000529745 U3KPZ7 1027 aaPredicted RBP18.18■□□□□ 0.5
CCDC90B-215ENST00000529745 A0A1W2PPC1 479 aa18.17■□□□□ 0.5
CCDC90B-215ENST00000529745 B4E1Z4 1266 aa18.17■□□□□ 0.5
CCDC90B-215ENST00000529745 CYP2C19P33261 490 aa18.17■□□□□ 0.5
CCDC90B-215ENST00000529745 PTH1RQ03431 593 aa18.17■□□□□ 0.5
CCDC90B-215ENST00000529745 RASGRP2Q7LDG7 609 aa18.17■□□□□ 0.5
CCDC90B-215ENST00000529745 ZNF467Q7Z7K2 595 aaPredicted RBP18.17■□□□□ 0.5
CCDC90B-215ENST00000529745 CPXCR1Q8N123 301 aa18.17■□□□□ 0.5
CCDC90B-215ENST00000529745 MAP4K1Q92918 833 aa18.17■□□□□ 0.5
CCDC90B-215ENST00000529745 HTATIP2Q9BUP3 242 aa18.17■□□□□ 0.5
CCDC90B-215ENST00000529745 RANBP17Q9H2T7 1088 aaKnown RBP18.17■□□□□ 0.5
CCDC90B-215ENST00000529745 MYH6P13533 1939 aa18.17■□□□□ 0.5
CCDC90B-215ENST00000529745 MCM3APO60318 1980 aa18.17■□□□□ 0.5
CCDC90B-215ENST00000529745 CYP21A2P08686 494 aa18.16■□□□□ 0.5
CCDC90B-215ENST00000529745 ZNF543Q08ER8 600 aa18.16■□□□□ 0.5
CCDC90B-215ENST00000529745 TRPV1Q8NER1 839 aa18.16■□□□□ 0.5
CCDC90B-215ENST00000529745 ZSCAN10Q96SZ4 725 aaPredicted RBP18.16■□□□□ 0.5
CCDC90B-215ENST00000529745 DDX20Q9UHI6 824 aaKnown RBP18.16■□□□□ 0.5
CCDC90B-215ENST00000529745 VCANP13611 3396 aa18.15■□□□□ 0.5
CCDC90B-215ENST00000529745 IKQ13123 557 aaPredicted RBP18.15■□□□□ 0.5
CCDC90B-215ENST00000529745 CCDC96Q2M329 555 aa18.15■□□□□ 0.5
CCDC90B-215ENST00000529745 GPATCH4Q5T3I0 446 aaKnown RBP18.15■□□□□ 0.5
CCDC90B-215ENST00000529745 MAMDC4Q6UXC1 1216 aa18.15■□□□□ 0.5
CCDC90B-215ENST00000529745 NECAB2Q7Z6G3 386 aa18.15■□□□□ 0.5
CCDC90B-215ENST00000529745 ENAHQ8N8S7 591 aaPredicted RBP18.15■□□□□ 0.5
CCDC90B-215ENST00000529745 TINF2Q9BSI4 451 aa18.15■□□□□ 0.5
CCDC90B-215ENST00000529745 COL25A1Q9BXS0 654 aaPredicted RBP18.15■□□□□ 0.5
CCDC90B-215ENST00000529745 LRRC37A2A6NM11 1700 aa18.15■□□□□ 0.5
CCDC90B-215ENST00000529745 SEPT4O43236 478 aa18.14■□□□□ 0.49
CCDC90B-215ENST00000529745 ICAM1P05362 532 aa18.14■□□□□ 0.49
CCDC90B-215ENST00000529745 PGK2P07205 417 aa18.14■□□□□ 0.49
CCDC90B-215ENST00000529745 SYDE2Q5VT97 1194 aa18.14■□□□□ 0.49
CCDC90B-215ENST00000529745 PNMA1Q8ND90 353 aa18.14■□□□□ 0.49
CCDC90B-215ENST00000529745 PAWRQ96IZ0 340 aaKnown RBP18.14■□□□□ 0.49
CCDC90B-215ENST00000529745 ZKSCAN3Q9BRR0 538 aa18.14■□□□□ 0.49
CCDC90B-215ENST00000529745 ACAD9Q9H845 621 aa18.14■□□□□ 0.49
CCDC90B-215ENST00000529745 PNMA2Q9UL42 364 aa18.14■□□□□ 0.49
CCDC90B-215ENST00000529745 TNKSO95271 1327 aa18.14■□□□□ 0.49
CCDC90B-215ENST00000529745 SYNGAP1Q96PV0 1343 aa18.14■□□□□ 0.49
CCDC90B-215ENST00000529745 COL6A1P12109 1028 aa18.13■□□□□ 0.49
CCDC90B-215ENST00000529745 SEC23AQ15436 765 aa18.13■□□□□ 0.49
CCDC90B-215ENST00000529745 TTBK2Q6IQ55 1244 aa18.13■□□□□ 0.49
CCDC90B-215ENST00000529745 DDX11Q96FC9 970 aa18.13■□□□□ 0.49
CCDC90B-215ENST00000529745 AGBL1Q96MI9 1066 aa18.13■□□□□ 0.49
CCDC90B-215ENST00000529745 ESYT1Q9BSJ8 1104 aa18.13■□□□□ 0.49
CCDC90B-215ENST00000529745 ISY1Q9ULR0 285 aaKnown RBP18.13■□□□□ 0.49
CCDC90B-215ENST00000529745 TRDNQ13061 729 aa18.12■□□□□ 0.49
CCDC90B-215ENST00000529745 ANKRD35Q8N283 1001 aa18.12■□□□□ 0.49
CCDC90B-215ENST00000529745 DIS3LQ8TF46 1054 aaKnown RBP18.12■□□□□ 0.49
CCDC90B-215ENST00000529745 CCDC136Q96JN2 1154 aa18.12■□□□□ 0.49
CCDC90B-215ENST00000529745 FGD4Q96M96 766 aa18.12■□□□□ 0.49
CCDC90B-215ENST00000529745 LSG1Q9H089 658 aaKnown RBP18.12■□□□□ 0.49
CCDC90B-215ENST00000529745 KAT14Q9H8E8 782 aa18.12■□□□□ 0.49
CCDC90B-215ENST00000529745 RNF146Q9NTX7 359 aa18.12■□□□□ 0.49
CCDC90B-215ENST00000529745 NR2E3Q9Y5X4 410 aa18.12■□□□□ 0.49
CCDC90B-215ENST00000529745 PFASO15067 1338 aa18.12■□□□□ 0.49
CCDC90B-215ENST00000529745 WDR19Q8NEZ3 1342 aa18.12■□□□□ 0.49
CCDC90B-215ENST00000529745 E7EWF7 191 aa18.11■□□□□ 0.49
CCDC90B-215ENST00000529745 SLC16A2P36021 539 aa18.11■□□□□ 0.49
CCDC90B-215ENST00000529745 ASPRV1Q53RT3 343 aa18.11■□□□□ 0.49
CCDC90B-215ENST00000529745 CYB5R4Q7L1T6 521 aa18.11■□□□□ 0.49
CCDC90B-215ENST00000529745 FAM133AQ8N9E0 248 aa18.11■□□□□ 0.49
CCDC90B-215ENST00000529745 TRERF1Q96PN7 1200 aa18.11■□□□□ 0.49
CCDC90B-215ENST00000529745 UBAC1Q9BSL1 405 aa18.11■□□□□ 0.49
CCDC90B-215ENST00000529745 MAF1Q9H063 256 aa18.11■□□□□ 0.49
CCDC90B-215ENST00000529745 A1CFQ9NQ94 594 aaKnown RBP18.11■□□□□ 0.49
CCDC90B-215ENST00000529745 MTMR7Q9Y216 660 aa18.11■□□□□ 0.49
CCDC90B-215ENST00000529745 RBM8AQ9Y5S9 174 aaKnown RBP18.11■□□□□ 0.49
CCDC90B-215ENST00000529745 FRMPD2Q68DX3 1309 aaPredicted RBP18.11■□□□□ 0.49
CCDC90B-215ENST00000529745 ZNF865P0CJ78 1059 aaPredicted RBP18.1■□□□□ 0.49
CCDC90B-215ENST00000529745 CNGA1P29973 690 aa18.1■□□□□ 0.49
CCDC90B-215ENST00000529745 KIAA1211Q6ZU35 1233 aa18.1■□□□□ 0.49
CCDC90B-215ENST00000529745 NCOA7Q8NI08 942 aa18.1■□□□□ 0.49
CCDC90B-215ENST00000529745 CHMP4CQ96CF2 233 aa18.1■□□□□ 0.49
CCDC90B-215ENST00000529745 MTA3Q9BTC8 594 aa18.1■□□□□ 0.49
CCDC90B-215ENST00000529745 C11orf49Q9H6J7 331 aa18.1■□□□□ 0.49
CCDC90B-215ENST00000529745 GPCPD1Q9NPB8 672 aa18.1■□□□□ 0.49
CCDC90B-215ENST00000529745 CCPG1Q9ULG6 757 aa18.1■□□□□ 0.49
CCDC90B-215ENST00000529745 DNM1LO00429 736 aa18.09■□□□□ 0.49
CCDC90B-215ENST00000529745 SNAI1O95863 264 aaPredicted RBP18.09■□□□□ 0.49
CCDC90B-215ENST00000529745 ALAS1P13196 640 aa18.09■□□□□ 0.49
CCDC90B-215ENST00000529745 IFIT1BQ5T764 474 aaKnown RBP18.09■□□□□ 0.49
CCDC90B-215ENST00000529745 ERICH6BQ5W0A0 696 aa18.09■□□□□ 0.49
CCDC90B-215ENST00000529745 GPR153Q6NV75 609 aa18.09■□□□□ 0.49
CCDC90B-215ENST00000529745 CCDC174Q6PII3 467 aa18.09■□□□□ 0.49
CCDC90B-215ENST00000529745 STOX1Q6ZVD7 989 aa18.09■□□□□ 0.49
CCDC90B-215ENST00000529745 SKAP1Q86WV1 359 aa18.09■□□□□ 0.49
CCDC90B-215ENST00000529745 STXBP5LQ9Y2K9 1186 aa18.09■□□□□ 0.49
CCDC90B-215ENST00000529745 TAF6LQ9Y6J9 622 aa18.09■□□□□ 0.49
CCDC90B-215ENST00000529745 LOC102724159A0A0B4J2E5 919 aa18.08■□□□□ 0.48
CCDC90B-215ENST00000529745 POTEB2H3BUK9 544 aa18.08■□□□□ 0.48
CCDC90B-215ENST00000529745 SLC4A3P48751 1232 aa18.08■□□□□ 0.48
CCDC90B-215ENST00000529745 NECTIN1Q15223 517 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms